Start New Search

Search results are listed below.
Tip:
To quickly search the same gene in another data set, click the links from the last column. The locuslink number will be used as query.

 

No probe set Gene Name Accession LocusLink Symbol Alias Symbols Description CTRL FSK (FSK vs CTRL) FC (FSK vs CTRL) LFC Note Link
1 210409_at "myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4" AB0168984301MLLT4 AF-6;AF6;AFADIN "gb:AB016898.1 /DB_XREF=gi:5006252 /GEN=HGC6.4 /FEA=FLmRNA /CNT=6 /TID=Hs.100469.1 /TIER=FL /STK=0 /UG=Hs.100469 /LL=4301 /UG_TITLE=myeloidlymphoid or mixed-lineage leukemia (trithorax (Drosophila) homolog); translocated to, 4 /DEF=Homo sapiens HGC6.4 mRNA, complete cds. /FL=gb:AB016898.1" 156.95 191.99 1.22 1.09 "all, " HEK293T_Expression Human_ChIP_chip Human_CRE_prediction
2 211111_at "myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4" AB0169024301MLLT4 AF-6;AF6;AFADIN "gb:AB016902.2 /DB_XREF=gi:5030941 /GEN=HGC6.3 /FEA=FLmRNA /CNT=1 /TID=Hs.100469.0 /TIER=FL /STK=0 /UG=Hs.100469 /LL=4301 /UG_TITLE=myeloidlymphoid or mixed-lineage leukemia (trithorax (Drosophila) homolog); translocated to, 4 /DEF=Homo sapiens HGC6.3 mRNA, complete cds. /FL=gb:AB016902.2" 152.02 170.43 1.12 0.97 "all, " HEK293T_Expression Human_ChIP_chip Human_CRE_prediction
3 214939_x_at "myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4" AB0113994301MLLT4 AF-6;AF6;AFADIN "Consensus includes gb:AB011399 /DEF=Homo sapiens gene for AF-6, complete cds /FEA=CDS_2 /DB_XREF=gi:3452571 /UG=Hs.100469 myeloidlymphoid or mixed-lineage leukemia (trithorax (Drosophila) homolog); translocated to, 4" 189.26 211.01 1.11 0.96 "all, " HEK293T_Expression Human_ChIP_chip Human_CRE_prediction
4 208512_s_at "myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4" NM_0059364301MLLT4 AF-6;AF6;AFADIN "gb:NM_005936.1 /DB_XREF=gi:5174574 /GEN=MLLT4 /FEA=FLmRNA /CNT=3 /TID=Hs.100469.4 /TIER=FL /STK=0 /UG=Hs.100469 /LL=4301 /DEF=Homo sapiens myeloidlymphoid or mixed-lineage leukemia (trithorax (Drosophila) homolog); translocated to, 4 (MLLT4), mRNA. /PROD=myeloidlymphoid or mixed-lineage leukemia(trithorax (Drosophila) homolog); translocated to, 4 /FL=gb:U02478.1 gb:NM_005936.1" 134.8 152.06 1.13 0.91 "all, " HEK293T_Expression Human_ChIP_chip Human_CRE_prediction
5 215904_at "Consensus includes gb:AL049698 /DEF=Human DNA sequence from clone RP3-470B24 on chromosome 6q26-27. Contains the 3 end of the MLLT4 gene for myeloidlymphoid or mixed-lineage leukemia (trithorax (Drosophila) homolog) 4 (AF-6), ESTs and STSs /FEA=CDS_2 /DB_XREF=gi:6143632 /UG=Hs.100469 myeloidlymphoid or mixed-lineage leukemia (trithorax (Drosophila) homolog); translocated to, 4" AL0496984301MLLT4 AF-6;AF6;AFADIN "Consensus includes gb:AL049698 /DEF=Human DNA sequence from clone RP3-470B24 on chromosome 6q26-27. Contains the 3 end of the MLLT4 gene for myeloidlymphoid or mixed-lineage leukemia (trithorax (Drosophila) homolog) 4 (AF-6), ESTs and STSs /FEA=CDS_2 /DB_XREF=gi:6143632 /UG=Hs.100469 myeloidlymphoid or mixed-lineage leukemia (trithorax (Drosophila) homolog); translocated to, 4" 82.43 87.78 1.06 0.79 "all, " HEK293T_Expression Human_ChIP_chip Human_CRE_prediction

Sample Description:
Primary culture of human pancreatic islet was treated with cAMP agonist forskolin (FSK) and compared with control untreated samples. RNA was extracted using the Qiagen RNeasy kit. Two control and two forskolin treated samples were analyzed.

Microarray Analysis:
Total RNA samples were labeled and hybridized by standard protocol to Affymetrix GeneChip Human Genome U133A 2.0 Array. Array data was analyzed using the dChip software with PM-MM models.

Guidelines for Choosing camp Induced Genes in this Data Set:
The fold change (FC) value is positive for increased expression and negative for decrease expression. There is also a lower bound of fold change (LFC), which is a conservative estimation of the fold change with 90% confidence. For this data set, if a gene was induced by FSK with LFC>=1.3, we consider it as a good camp induced gene and therefore a potential CREB target.