Start New Search

Search results are listed below.
Tip:
To quickly search the same gene in another data set, click the links from the last column. The locuslink number will be used as query.

 

No probe set Gene Name Accession LocusLink Symbol Alias Symbols Description CTRL FSK (FSK vs CTRL) FC (FSK vs CTRL) LFC Note Link
1 203148_s_at tripartite motif-containing 14 NM_0147889830TRIM14 KIAA0129 "gb:NM_014788.1 /DB_XREF=gi:7661927 /GEN=KIAA0129 /FEA=FLmRNA /CNT=97 /TID=Hs.179703.0 /TIER=FL+Stack /STK=13 /UG=Hs.179703 /LL=9830 /DEF=Homo sapiens KIAA0129 gene product (KIAA0129), mRNA. /PROD=KIAA0129 gene product /FL=gb:D50919.1 gb:NM_014788.1" 68.92 69.52 1.01 0.69 "all, " HEK293T_Expression Human_ChIP_chip Human_CRE_prediction
2 211044_at tripartite motif-containing 14 /// tripartite motif-containing 14 BC0063339830TRIM14 KIAA0129 "gb:BC006333.1 /DEF=Homo sapiens, clone MGC:12564, mRNA, complete cds. /FEA=mRNA /PROD=Unknown (protein for MGC:12564) /DB_XREF=gi:13623460 /FL=gb:BC006333.1" 134.06 106.86 -1.25 -0.93 "all, " HEK293T_Expression Human_ChIP_chip Human_CRE_prediction
3 210846_x_at tripartite motif-containing 14 AF2201309830TRIM14 KIAA0129 "gb:AF220130.1 /DEF=Homo sapiens tripartite motif protein TRIM14 alpha (TRIM14) mRNA, complete cds; alternatively spliced. /FEA=mRNA /GEN=TRIM14 /PROD=tripartite motif protein TRIM14 alpha /DB_XREF=gi:12407428 /UG=Hs.179703 KIAA0129 gene product /FL=gb:AF220130.1" 125.04 100.57 -1.24 -0.94 "all, " HEK293T_Expression Human_ChIP_chip Human_CRE_prediction
4 203147_s_at tripartite motif-containing 14 NM_0147889830TRIM14 KIAA0129 Consensus includes gb:BE962483 /FEA=EST /DB_XREF=gi:11765431 /DB_XREF=est:601655782R1 /CLONE=IMAGE:3846116 /UG=Hs.179703 KIAA0129 gene product /FL=gb:D50919.1 gb:NM_014788.1 529.2 400.19 -1.32 -1.12 "all, " HEK293T_Expression Human_ChIP_chip Human_CRE_prediction

Sample Description:
Primary culture of human pancreatic islet was treated with cAMP agonist forskolin (FSK) and compared with control untreated samples. RNA was extracted using the Qiagen RNeasy kit. Two control and two forskolin treated samples were analyzed.

Microarray Analysis:
Total RNA samples were labeled and hybridized by standard protocol to Affymetrix GeneChip Human Genome U133A 2.0 Array. Array data was analyzed using the dChip software with PM-MM models.

Guidelines for Choosing camp Induced Genes in this Data Set:
The fold change (FC) value is positive for increased expression and negative for decrease expression. There is also a lower bound of fold change (LFC), which is a conservative estimation of the fold change with 90% confidence. For this data set, if a gene was induced by FSK with LFC>=1.3, we consider it as a good camp induced gene and therefore a potential CREB target.