At1g01010 chr1:000003760 0 W/3760-3913,3996-4276,4486-4605,4706-5095,5174-5326,5439-5630 gene_syn ANAC001, Arabidopsis NAC domain containing protein 1, T25K16.1, T25K16_1 gene ANAC001 product ANAC001 (Arabidopsis NAC domain containing protein 1); transcription factor go_component cellular_component|GO:0005575||ND go_process multicellular organismal development|GO:0007275||RCA go_function transcription factor activity|GO:0003700|11118137|ISS note similar to ANAC069 (Arabidopsis NAC domain containing protein 69), transcription factor [Arabidopsis thaliana] (TAIR:AT4G01550.1); similar to Os08g0562200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062518.1); similar to putative NAC2 protein [Oryza sativa (japonica cultivar-group)] (GB:BAD09612.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) protein_id AT1G01010.1p transcript_id AT1G01010.1 At1g01020 chr1:000006915 0 C/6915-7069,7157-7232,7384-7450,7564-7649,7762-7835,7942-7987,8236-8325,8417-8464,8571-8666 gene_syn ARV1, T25K16.2, T25K16_2 gene ARV1 product ARV1 go_component membrane|GO:0016020||RCA go_process biological_process|GO:0008150||ND go_function molecular_function|GO:0003674||ND note similar to ARV2 [Arabidopsis thaliana] (TAIR:AT4G01510.1); similar to Os03g0784300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051472.1); similar to hypothetical protein [Oryza sativa] (GB:AAK72888.1); contains InterPro domain Proteinase inhibitor, PMP and SGCI; (InterPro:IPR009041); contains InterPro domain Arv1-like protein; (InterPro:IPR007290) protein_id AT1G01020.1p transcript_id AT1G01020.1 At1g01020 chr1:000007315 0 C/7315-7450,7564-7649,7762-7835,7942-7987,8236-8325,8417-8464,8571-8666 gene_syn ARV1, T25K16.2, T25K16_2 gene ARV1 product ARV1 go_component membrane|GO:0016020||RCA go_process biological_process|GO:0008150||ND go_function molecular_function|GO:0003674||ND note similar to ARV2 [Arabidopsis thaliana] (TAIR:AT4G01510.1); similar to hypothetical protein PF10_0110 [Plasmodium falciparum 3D7] (GB:NP_700584.1); contains InterPro domain Arv1-like protein; (InterPro:IPR007290) protein_id AT1G01020.2p transcript_id AT1G01020.2 At1g01030 chr1:000011864 0 C/11864-12940 gene_syn NGA3, NGATHA3, T25K16.3, T25K16_3 gene NGA3 product NGA3 (NGATHA3); transcription factor go_component cellular_component|GO:0005575||ND go_process flower development|GO:0009908|16603651|IMP go_process regulation of transcription|GO:0045449|11118137|TAS go_process leaf development|GO:0048366|16603651|IMP go_function transcription factor activity|GO:0003700|11118137|ISS note similar to NGA4 (NGATHA4), transcription factor [Arabidopsis thaliana] (TAIR:AT4G01500.1); similar to NGA1 (NGATHA1), transcription factor [Arabidopsis thaliana] (TAIR:AT2G46870.1); similar to Os02g0683500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047754.1); similar to Os03g0120900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048792.1); similar to putative DNA-binding protein [Oryza sativa (japonica cultivar-group)] (GB:AAM76357.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) protein_id AT1G01030.1p transcript_id AT1G01030.1 At1g01040 chr1:000023519 0 W/23519-24451,24542-24655,24752-24962,25041-25435,25524-25743,25825-25997,26081-26203,26292-26452,26543-26776,26862-27012,27099-27281,27372-27533,27618-27713,27803-28431,28708-28805,28890-29080,29160-30065,30147-30311,30410-30816,30902-31079 gene_syn ABNORMAL SUSPENSOR 1, ASU1, CAF, CARPEL FACTORY, DICER-LIKE1, EMB60, EMB76, EMBRYO DEFECTIVE 60, EMBRYO DEFECTIVE 76, SHORT INTEGUMENTS 1, SIN1, SUS1, SUSPENSOR 1, T25K16.4, T25K16_4 gene DCL1 function Encodes a Dicer homolog. Dicer is a RNA helicase involved in microRNA processing. Mutations in this locus can result in embryo lethality. Embryo shape at seed maturity is globular-elongate. Other mutants convert the floral meristems to an indeterminate state, others yet show defects in ovule development. mRNA is expressed in all shoot tissues. DCL1 is able to produce miRNAs and siRNAs. product DCL1 (DICER-LIKE1); ATP-dependent helicase/ ribonuclease III go_process flower development|GO:0009908|8787738|TAS go_function ribonuclease III activity|GO:0004525||RCA go_function ATP-dependent helicase activity|GO:0008026||RCA go_component nucleus|GO:0005634|15821876|IDA go_process cytokinesis|GO:0000910|10556049|IMP go_process RNA processing|GO:0006396|12225663|ISS go_process embryonic pattern specification|GO:0009880|8787738|IMP go_process suspensor development|GO:0010098||IMP go_process vegetative to reproductive phase transition|GO:0010228|8787738|IMP go_process primary microRNA processing|GO:0031053|16144699|TAS go_process miRNA-mediated gene silencing, production of miRNAs|GO:0035196|16810317|IGI go_process miRNA-mediated gene silencing, mRNA cleavage|GO:0035279|15851028|IMP go_function double-stranded RNA binding|GO:0003725|15821876|IDA go_function protein binding|GO:0005515|15821876|IPI note Identical to Endoribonuclease Dicer homolog (EC 3.1.26.-) (Protein CARPEL FACTORY) (Protein SHORT INTEGUMENTS 1) (Protein SUSPENSOR1) (CAF) [Arabidopsis Thaliana] (GB:Q9SP32;GB:Q9FDY6;GB:Q9MAN0); similar to DCL3 (DICER-LIKE 3), RNA binding / ribonuclease III [Arabidopsis thaliana] (TAIR:AT3G43920.1); similar to Helicase, C-terminal; Argonaute and Dicer protein, PAZ; Type III restriction enzyme, res subunit; Ribonuclease III, bacterial [Medicago truncatula] (GB:ABD32724.1); similar to Os03g0121800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048796.1); similar to Os01g0909200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045148.1); contains InterPro domain Argonaute and Dicer protein, PAZ; (InterPro:IPR003100); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain Protein of unknown function DUF283; (InterPro:IPR005034); contains InterPro domain Ribonuclease III; (InterPro:IPR000999); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650); contains InterPro domain Double-stranded RNA binding; (InterPro:IPR001159) protein_id AT1G01040.1p transcript_id AT1G01040.1 At1g01050 chr1:000031382 0 C/31382-31424,31521-31602,31693-31813,31933-31998,32088-32195,32282-32347,32431-32459,32547-32670 gene_syn T25K16.5, T25K16_5 product inorganic pyrophosphatase, putative (soluble) / pyrophosphate phospho-hydrolase, putative / PPase, putative go_component nucleus|GO:0005634|15610358|IDA go_component cytoplasm|GO:0005737|15610358|IDA go_component membrane|GO:0016020||RCA go_process metabolic process|GO:0008152||RCA go_function pyrophosphatase activity|GO:0016462||RCA note similar to inorganic pyrophosphatase, putative (soluble) / pyrophosphate phospho-hydrolase, putative / PPase, putative [Arabidopsis thaliana] (TAIR:AT4G01480.1); similar to inorganic pyrophosphatase, putative (soluble) / pyrophosphate phospho-hydrolase, putative / PPase, putative [Arabidopsis thaliana] (TAIR:AT2G46860.1); similar to soluble inorganic pyrophosphatase [Populus tremula x Populus tremuloides] (GB:AAD46520.1); contains InterPro domain Inorganic pyrophosphatase; (InterPro:IPR008162) protein_id AT1G01050.1p transcript_id AT1G01050.1 At1g01060 chr1:000033992 0 C/33992-34327,34401-35471,35567-35647,35730-35963,36624-36685,36810-36921,37023-37061 gene_syn LATE ELONGATED HYPOCOTYL, LHY1, T25K16.6, T25K16_6 gene LHY function myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1 product LHY (LATE ELONGATED HYPOCOTYL) go_component nucleus|GO:0005634||IEA go_process regulation of circadian rhythm|GO:0042752|12007421|IMP go_function transcription factor activity|GO:0003700|9657154|ISS note similar to CCA1 (CIRCADIAN CLOCK ASSOCIATED 1), transcription factor [Arabidopsis thaliana] (TAIR:AT2G46830.1); similar to late elongated hypocotyl [Castanea sativa] (GB:AAU20773.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) protein_id AT1G01060.4p transcript_id AT1G01060.4 At1g01060 chr1:000033992 0 C/33992-34327,34401-35474,35567-35647,35730-35963,36624-36685,36810-36921,37023-37061 gene_syn LATE ELONGATED HYPOCOTYL, LHY1, T25K16.6, T25K16_6 gene LHY function myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1 product LHY (LATE ELONGATED HYPOCOTYL); DNA binding go_component nucleus|GO:0005634||IEA go_function DNA binding|GO:0003677||RCA go_process regulation of circadian rhythm|GO:0042752|12007421|IMP go_function transcription factor activity|GO:0003700|9657154|ISS note similar to CCA1 (CIRCADIAN CLOCK ASSOCIATED 1), transcription factor [Arabidopsis thaliana] (TAIR:AT2G46830.1); similar to late elongated hypocotyl [Castanea sativa] (GB:AAU20773.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) protein_id AT1G01060.3p transcript_id AT1G01060.3 At1g01060 chr1:000033992 0 C/33992-34327,34401-35474,35567-35647,35730-35963,36624-36685,36810-36921,37023-37061 gene_syn LATE ELONGATED HYPOCOTYL, LHY1, T25K16.6, T25K16_6 gene LHY function myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1 product LHY (LATE ELONGATED HYPOCOTYL); DNA binding / transcription factor go_component nucleus|GO:0005634||IEA go_function DNA binding|GO:0003677||RCA go_function transcription factor activity|GO:0003700|11118137|ISS go_process regulation of circadian rhythm|GO:0042752|12007421|IMP go_function transcription factor activity|GO:0003700|9657154|ISS note similar to CCA1 (CIRCADIAN CLOCK ASSOCIATED 1), transcription factor [Arabidopsis thaliana] (TAIR:AT2G46830.1); similar to late elongated hypocotyl [Castanea sativa] (GB:AAU20773.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) protein_id AT1G01060.2p transcript_id AT1G01060.2 At1g01060 chr1:000033992 0 C/33992-34327,34401-35474,35567-35647,35730-35963,36624-36685,36810-36921,37023-37061 gene_syn LATE ELONGATED HYPOCOTYL, LHY1, T25K16.6, T25K16_6 gene LHY function myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1 product LHY (LATE ELONGATED HYPOCOTYL); DNA binding / transcription factor go_component nucleus|GO:0005634||IEA go_process response to salt stress|GO:0009651|16463103|IEP go_process response to ethylene stimulus|GO:0009723|16463103|IEP go_process response to auxin stimulus|GO:0009733|16463103|IEP go_process response to abscisic acid stimulus|GO:0009737|16463103|IEP go_process response to gibberellic acid stimulus|GO:0009739|16463103|IEP go_process response to salicylic acid stimulus|GO:0009751|16463103|IEP go_process response to jasmonic acid stimulus|GO:0009753|16463103|IEP go_process regulation of transcription|GO:0045449|11118137|TAS go_process response to cadmium ion|GO:0046686|16463103|IEP go_function DNA binding|GO:0003677||RCA go_function transcription factor activity|GO:0003700|11118137|ISS go_process regulation of circadian rhythm|GO:0042752|12007421|IMP go_function transcription factor activity|GO:0003700|9657154|ISS note similar to CCA1 (CIRCADIAN CLOCK ASSOCIATED 1), transcription factor [Arabidopsis thaliana] (TAIR:AT2G46830.1); similar to late elongated hypocotyl [Castanea sativa] (GB:AAU20773.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) protein_id AT1G01060.1p transcript_id AT1G01060.1 At1g01070 chr1:000038898 0 C/38898-39054,39136-39287,39409-39814,40213-40329,40473-40535,40675-40877 gene_syn T25K16.7, T25K16_7 product nodulin MtN21 family protein go_component membrane|GO:0016020||IEA note similar to nodulin MtN21 family protein [Arabidopsis thaliana] (TAIR:AT1G11460.1); similar to Os06g0109300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056575.1); similar to Os02g0103600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045606.1); similar to Protein of unknown function DUF6, transmembrane [Medicago truncatula] (GB:ABE82165.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620) protein_id AT1G01070.1p transcript_id AT1G01070.1 At1g01070 chr1:000038898 0 C/38898-39054,39136-39287,39409-39814,40213-40329,40473-40597 gene_syn T25K16.7, T25K16_7 product nodulin MtN21 family protein go_component membrane|GO:0016020||IEA note similar to nodulin MtN21 family protein [Arabidopsis thaliana] (TAIR:AT1G11460.1); similar to nodulin MtN21 family protein [Arabidopsis thaliana] (TAIR:AT1G11450.2); similar to Os06g0109300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056575.1); similar to Os02g0103600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045606.1); similar to H0523F07.12 [Oryza sativa (indica cultivar-group)] (GB:CAH67024.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620) protein_id AT1G01070.2p transcript_id AT1G01070.2 At1g01080 chr1:000045503 0 C/45503-45559,45646-45954,46044-46145,46373-46789 gene_syn T25K16.19, T25K16_19 product RNA binding go_component chloroplast|GO:0009507||IEA go_function RNA binding|GO:0003723||RCA note similar to CP33 (PIGMENT DEFECTIVE 322), RNA binding [Arabidopsis thaliana] (TAIR:AT3G52380.1); similar to 33 kDa ribonucleoprotein, chloroplast precursor (GB:P19684); similar to Os08g0117100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060859.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) protein_id AT1G01080.2p transcript_id AT1G01080.2 At1g01080 chr1:000045503 0 C/45503-45559,45646-45954,46044-46145,46376-46789 gene_syn T25K16.19, T25K16_19 product 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative go_component chloroplast|GO:0009507||IEA go_process biological_process|GO:0008150||ND go_function RNA binding|GO:0003723||RCA note similar to CP33 (PIGMENT DEFECTIVE 322), RNA binding [Arabidopsis thaliana] (TAIR:AT3G52380.1); similar to RNA-binding re (GB:ABD32708.1); similar to Os08g0117100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060859.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) protein_id AT1G01080.1p transcript_id AT1G01080.1 At1g01090 chr1:000047705 0 C/47705-47982,48075-48852,48936-49166 gene_syn PYRUVATE DEHYDROGENASE E1 ALPHA, T25K16.8, T25K16_8 gene PDH-E1 ALPHA function pyruvate dehydrogenase E1 alpha subunit product PDH-E1 ALPHA (PYRUVATE DEHYDROGENASE E1 ALPHA); pyruvate dehydrogenase (acetyl-transferring) go_component chloroplast|GO:0009507||IEA go_process metabolic process|GO:0008152||RCA go_function pyruvate dehydrogenase (acetyl-transferring) activity|GO:0004739||RCA note similar to AT-E1 ALPHA (pyruvate dehydrogenase complex E1 alpha subunit), pyruvate dehydrogenase (acetyl-transferring) [Arabidopsis thaliana] (TAIR:AT1G59900.1); similar to H0716A07.7 [Oryza sativa (indica cultivar-group)] (GB:CAH65949.1); similar to Os04g0119400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052065.1); contains InterPro domain Dehydrogenase, E1 component; (InterPro:IPR001017) protein_id AT1G01090.1p transcript_id AT1G01090.1 At1g01100 chr1:000050284 0 C/50284-50337,50419-50447,50496-50631,50883-50954 gene_syn T25K16.9, T25K16_9 product 60S acidic ribosomal protein P1 (RPP1A) note Identical to 60S acidic ribosomal protein P1-1 (RPP1A) [Arabidopsis Thaliana] (GB:Q8LCW9;GB:Q9MAM5); Identical to 60S acidic ribosomal protein P1-3 (RPP1C) [Arabidopsis Thaliana] (GB:Q8LEQ0;GB:Q9FIK9); similar to 60S acidic ribosomal protein P1 (RPP1C) [Arabidopsis thaliana] (TAIR:AT5G47700.2); similar to acidic ribosomal protein P1a-like [Solanum tuberosum] (GB:ABB29934.1); contains InterPro domain Ribosomal protein 60S; (InterPro:IPR001813) protein_id AT1G01100.3p transcript_id AT1G01100.3 At1g01100 chr1:000050284 0 C/50284-50337,50419-50631,50883-50954 gene_syn T25K16.9, T25K16_9 product 60S acidic ribosomal protein P1 (RPP1A) go_component ribosome|GO:0005840||RCA go_process translational elongation|GO:0006414||RCA go_function structural constituent of ribosome|GO:0003735||RCA note Identical to 60S acidic ribosomal protein P1-1 (RPP1A) [Arabidopsis Thaliana] (GB:Q8LCW9;GB:Q9MAM5); Identical to 60S acidic ribosomal protein P1-3 (RPP1C) [Arabidopsis Thaliana] (GB:Q8LEQ0;GB:Q9FIK9); similar to 60S acidic ribosomal protein P1 (RPP1C) [Arabidopsis thaliana] (TAIR:AT5G47700.2); similar to acidic ribosomal protein P1a-like [Solanum tuberosum] (GB:ABB29934.1); contains InterPro domain Ribosomal protein P2; (InterPro:IPR001859); contains InterPro domain Ribosomal protein 60S; (InterPro:IPR001813) protein_id AT1G01100.1p transcript_id AT1G01100.1 At1g01100 chr1:000050284 0 C/50284-50337,50419-50631,50883-50954 gene_syn T25K16.9, T25K16_9 product 60S acidic ribosomal protein P1 (RPP1A) go_component ribosome|GO:0005840||RCA go_process translational elongation|GO:0006414||RCA go_function structural constituent of ribosome|GO:0003735||RCA note Identical to 60S acidic ribosomal protein P1-1 (RPP1A) [Arabidopsis Thaliana] (GB:Q8LCW9;GB:Q9MAM5); Identical to 60S acidic ribosomal protein P1-3 (RPP1C) [Arabidopsis Thaliana] (GB:Q8LEQ0;GB:Q9FIK9); similar to 60S acidic ribosomal protein P1 (RPP1C) [Arabidopsis thaliana] (TAIR:AT5G47700.2); similar to acidic ribosomal protein P1a-like [Solanum tuberosum] (GB:ABB29934.1); contains InterPro domain Ribosomal protein P2; (InterPro:IPR001859); contains InterPro domain Ribosomal protein 60S; (InterPro:IPR001813) protein_id AT1G01100.2p transcript_id AT1G01100.2 At1g01100 chr1:000050284 0 C/50284-50337,50419-50631,50883-50954 gene_syn T25K16.9, T25K16_9 product 60S acidic ribosomal protein P1 (RPP1A) note Identical to 60S acidic ribosomal protein P1-1 (RPP1A) [Arabidopsis Thaliana] (GB:Q8LCW9;GB:Q9MAM5); Identical to 60S acidic ribosomal protein P1-3 (RPP1C) [Arabidopsis Thaliana] (GB:Q8LEQ0;GB:Q9FIK9); similar to 60S acidic ribosomal protein P1 (RPP1C) [Arabidopsis thaliana] (TAIR:AT5G47700.2); similar to acidic ribosomal protein P1a-like [Solanum tuberosum] (GB:ABB29934.1); contains InterPro domain Ribosomal protein P2; (InterPro:IPR001859); contains InterPro domain Ribosomal protein 60S; (InterPro:IPR001813) protein_id AT1G01100.4p transcript_id AT1G01100.4 At1g01110 chr1:000053022 0 W/53022-53183,53484-53624,53703-54494 gene_syn IQ-domain 18, IQD18, T25K16.10, T25K16_10 gene IQD18 product IQD18 (IQ-domain 18) go_component mitochondrion|GO:0005739||IEA go_function molecular_function|GO:0003674||ND note similar to IQD17 (IQ-domain 17), calmodulin binding [Arabidopsis thaliana] (TAIR:AT4G00820.1); similar to putative SF16 protein [Oryza sativa (japonica cultivar-group)] (GB:AAV33309.1); similar to Os08g0115200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060851.1); similar to Os01g0833800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044716.1) protein_id AT1G01110.1p transcript_id AT1G01110.1 At1g01120 chr1:000057392 0 C/57392-58978 gene_syn 3-KETOACYL-COA SYNTHASE 1, 3-ketoacyl-CoA synthase 1, T25K16.11, T25K16_11 gene KCS1 function Encodes a condensing enzyme (3-ketoacyl-CoA synthase) which is involved in the critical fatty acid elongation process in wax biosynthesis. product KCS1 (3-KETOACYL-COA SYNTHASE 1); acyltransferase go_process very-long-chain fatty acid metabolic process|GO:0000038|10074711|IDA go_process fatty acid elongation|GO:0030497|10074711|IDA go_process cuticle development|GO:0042335|10074711|IMP go_function acyltransferase activity|GO:0008415||RCA go_component membrane|GO:0016020|10074711|ISS go_process wax biosynthetic process|GO:0010025|10074711|IDA go_process wax biosynthetic process|GO:0010025|10074711|IMP go_function fatty acid elongase activity|GO:0009922|10074711|IDA note Identical to 3-ketoacyl-CoA synthase 1 (EC 2.3.1.-) (EC 2.3.1.119) (KCS-1) (Very- long-chain fatty acid condensing enzyme 1) (VLCFA condensing enzyme 1) (KCS1) [Arabidopsis Thaliana] (GB:Q9MAM3;GB:Q56YX9;GB:Q9ZTK3); similar to beta-ketoacyl-CoA synthase, putative [Arabidopsis thaliana] (TAIR:AT2G26640.1); similar to fatty acid elongase 3-ketoacyl-CoA synthase [Brassica napus] (GB:AAT65207.1); similar to Chalcone and stilbene synthases, N-terminal [Medicago truncatula] (GB:ABD32702.1); similar to fatty acid elongase 3-ketoacyl-CoA synthase [Brassica napus] (GB:AAT65206.1); contains InterPro domain FAE1/Type III polyketide synthase-like protein; (InterPro:IPR013601); contains InterPro domain Very-long-chain 3-ketoacyl-CoA synthase; (InterPro:IPR012392); contains InterPro domain Chalcone and stilbene synthases, C-terminal; (InterPro:IPR012328) protein_id AT1G01120.1p transcript_id AT1G01120.1 At1g01130 chr1:000061963 0 C/61963-62124,63431-63811 gene_syn F6F3.33 product unknown protein go_component cellular_component|GO:0005575||ND go_process biological_process|GO:0008150||ND go_function molecular_function|GO:0003674||ND note similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G47170.1); contains domain CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE-RELATED (PTHR22982); contains domain CBL-INTERACTING PROTEIN KINASE-RELATED (PTHR22982:SF45) protein_id AT1G01130.1p transcript_id AT1G01130.1 At1g01140 chr1:000064398 0 C/64398-64475,64570-64656,64751-64807,64901-65017,65110-65217,65331-65456,65563-65652,65739-65864,66107-66160,66262-66342,66450-66557,66678-66749,66835-66897,67324-67512 gene_syn CBL-INTERACTING PROTEIN KINASE 9, F6F3.28, PKS6, SNF1-RELATED PROTEIN KINASE 3.12, SnRK3.12 gene CIPK9 function Encodes a CBL-interacting protein kinase with similarity to SOS2 product CIPK9 (CBL-INTERACTING PROTEIN KINASE 9); kinase go_process protein amino acid phosphorylation|GO:0006468||IEA go_process signal transduction|GO:0007165||IEA go_function kinase activity|GO:0016301||RCA note similar to CIPK23 (CBL-INTERACTING PROTEIN KINASE 23), kinase [Arabidopsis thaliana] (TAIR:AT1G30270.2); similar to CBL-interacting protein kinase 13 [Populus trichocarpa] (GB:ABJ91220.1); similar to CIPK-like protein 1, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF93761.1); similar to CBL-interacting protein kinase 12 [Populus trichocarpa] (GB:ABJ91219.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) protein_id AT1G01140.3p transcript_id AT1G01140.3 At1g01140 chr1:000064398 0 C/64398-64475,64582-64656,64751-64807,64901-65017,65110-65217,65331-65456,65563-65652,65733-65864,66107-66160,66262-66342,66450-66557,66678-66749,66835-66897,67324-67512 gene_syn CBL-INTERACTING PROTEIN KINASE 9, F6F3.28, PKS6, SNF1-RELATED PROTEIN KINASE 3.12, SnRK3.12 gene CIPK9 function Encodes a CBL-interacting protein kinase with similarity to SOS2 product CIPK9 (CBL-INTERACTING PROTEIN KINASE 9); kinase go_process protein amino acid phosphorylation|GO:0006468||IEA go_process signal transduction|GO:0007165||IEA go_function kinase activity|GO:0016301||RCA note similar to CIPK23 (CBL-INTERACTING PROTEIN KINASE 23), kinase [Arabidopsis thaliana] (TAIR:AT1G30270.2); similar to CBL-interacting protein kinase 13 [Populus trichocarpa] (GB:ABJ91220.1); similar to CIPK-like protein 1, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF93761.1); similar to CBL-interacting protein kinase 12 [Populus trichocarpa] (GB:ABJ91219.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) protein_id AT1G01140.2p transcript_id AT1G01140.2 At1g01140 chr1:000064398 0 C/64398-64475,64582-64656,64751-64807,64901-65017,65110-65217,65331-65456,65563-65652,65739-65864,66107-66160,66262-66342,66450-66557,66678-66749,66835-66897,67324-67512 gene_syn CBL-INTERACTING PROTEIN KINASE 9, F6F3.28, PKS6, SNF1-RELATED PROTEIN KINASE 3.12, SnRK3.12 gene CIPK9 function Encodes a CBL-interacting protein kinase with similarity to SOS2 product CIPK9 (CBL-INTERACTING PROTEIN KINASE 9); kinase go_process protein amino acid phosphorylation|GO:0006468||IEA go_process signal transduction|GO:0007165||IEA go_function kinase activity|GO:0016301||RCA note similar to CIPK23 (CBL-INTERACTING PROTEIN KINASE 23), kinase [Arabidopsis thaliana] (TAIR:AT1G30270.2); similar to CBL-interacting protein kinase 13 [Populus trichocarpa] (GB:ABJ91220.1); similar to CIPK-like protein 1, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF93761.1); similar to CBL-interacting protein kinase 12 [Populus trichocarpa] (GB:ABJ91219.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) protein_id AT1G01140.1p transcript_id AT1G01140.1 At1g01150 chr1:000070115 0 C/70115-70285,70840-70968,71041-71721,71942-71998 gene_syn F6F3.30 product DNA binding / zinc ion binding go_component nucleus|GO:0005634||IEA go_process regulation of transcription|GO:0045449||IEA go_function DNA binding|GO:0003677||IEA go_function zinc ion binding|GO:0008270||IEA note similar to TRFL10 (TRF-LIKE 10), DNA binding [Arabidopsis thaliana] (TAIR:AT5G03780.1); similar to Os11g0160700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065819.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAX95463.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) protein_id AT1G01150.1p transcript_id AT1G01150.1 At1g01160 chr1:000072583 0 W/72583-72669,73087-73163,73287-73395,73488-73740,73822-73883 gene_syn F6F3.29, GRF1-INTERACTING FACTOR 2 gene GIF2 function Arabidopsis thaliana GRF1-interacting factor 2 (GIF2) mRNA product GIF2 (GRF1-INTERACTING FACTOR 2) go_process biological_process|GO:0008150||ND go_component nucleus|GO:0005634|15326298|ISS go_function transcription coactivator activity|GO:0003713|12974814|ISS go_function protein binding|GO:0005515|15326298|IPI note similar to GIF3 (GRF1-INTERACTING FACTOR 3) [Arabidopsis thaliana] (TAIR:AT4G00850.1); similar to Os12g0496900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066805.1); similar to Calcium-responsive transcription coactivator (ISS) [Ostreococcus tauri] (GB:CAL54353.1); similar to Os11g0615200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068275.1); contains InterPro domain SSXT; (InterPro:IPR007726) protein_id AT1G01160.1p transcript_id AT1G01160.1 At1g01170 chr1:000074105 0 C/74105-74250,74338-74443 gene_syn F6F3.32 product ozone-responsive stress-related protein, putative go_component endomembrane system|GO:0012505||IEA go_process response to stress|GO:0006950||RCA go_function molecular_function|GO:0003674||ND note similar to ATOZI1 (Arabidopsis thaliana ozone-induced protein 1) [Arabidopsis thaliana] (TAIR:AT4G00860.1); similar to Os06g0115100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056609.1); similar to Os06g0114500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056604.1); similar to Protein of unknown function (DUF1138) [Oryza sativa (japonica cultivar-group)] (GB:AAX95468.1); contains InterPro domain Protein of unknown function DUF1138; (InterPro:IPR009515) protein_id AT1G01170.1p transcript_id AT1G01170.1 At1g01170 chr1:000074105 0 C/74105-74250,74338-74443 gene_syn F6F3.32 product ozone-responsive stress-related protein, putative go_component endomembrane system|GO:0012505||IEA go_process response to stress|GO:0006950||RCA go_function molecular_function|GO:0003674||ND note similar to ATOZI1 (Arabidopsis thaliana ozone-induced protein 1) [Arabidopsis thaliana] (TAIR:AT4G00860.1); similar to Os06g0115100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056609.1); similar to Os06g0114500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056604.1); similar to Protein of unknown function (DUF1138) [Oryza sativa (japonica cultivar-group)] (GB:AAX95468.1); contains InterPro domain Protein of unknown function DUF1138; (InterPro:IPR009515) protein_id AT1G01170.2p transcript_id AT1G01170.2 At1g01180 chr1:000075633 0 W/75633-76547,76814-76951,77031-77280,77313-77446 gene_syn F6F3.5 product unknown protein go_process biological_process|GO:0008150||ND note similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G19270.1); similar to hypothetical protein DshiDRAFT_0470 [Dinoroseobacter shibae DFL 12] (GB:ZP_01587119.1); similar to Os09g0518900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063691.1); contains domain no description (G3D.3.40.50.150); contains domain S-adenosyl-L-methionine-dependent methyltransferases (SSF53335) protein_id AT1G01180.1p transcript_id AT1G01180.1 At1g01183 chr1:000078932 0 C/78932-79032 gene_syn MIR165, MIR165a gene MIR165/MIR165a function Encodes a microRNA. MicroRNAs are regulatory RNAs with a mature length of ~21-nucleotides that are processed from hairpin precursors by Dicer-like enzymes. MicroRNAs can negatively regulate gene expression by attenuating translation or by directing mRNA cleavage. Mature sequence: TCGGACCAGGCTTCATCCCCC product MIR165/MIR165a; miRNA go_component cellular_component|GO:0005575||ND go_process miRNA-mediated gene silencing|GO:0035195|15200956|TAS go_function molecular_function|GO:0003674||ND At1g01190 chr1:000083045 0 C/83045-83671,83884-84864 gene_syn F6F3.25, cytochrome P450, family 78, subfamily A, polypeptide 8 gene CYP78A8 function member of CYP78A product CYP78A8 (cytochrome P450, family 78, subfamily A, polypeptide 8); oxygen binding go_component endomembrane system|GO:0012505||IEA go_process electron transport|GO:0006118||IEA go_function oxygen binding|GO:0019825||RCA note similar to CYP78A9 (CYTOCHROME P450 78A9), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G61880.1); similar to CYP78A6 (cytochrome P450, family 78, subfamily A, polypeptide 6), oxygen binding [Arabidopsis thaliana] (TAIR:AT2G46660.1); similar to Cytochrome P450 78A3 (GB:O48927); similar to cytochrome P450 monooxygenase CYP78A29 [Medicago truncatula] (GB:ABC59089.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) protein_id AT1G01190.1p transcript_id AT1G01190.1 At1g01200 chr1:000086715 0 C/86715-87162,87880-88145 gene_syn Arabidopsis Rab GTPase homolog A3, AtRABA3, F6F3.1, F6F3_1 gene AtRABA3 product AtRABA3 (Arabidopsis Rab GTPase homolog A3); GTP binding go_process small GTPase mediated signal transduction|GO:0007264||IEA go_process protein transport|GO:0015031||IEA go_function GTP binding|GO:0005525||RCA note similar to SMG1 (SMALL MOLECULAR WEIGHT G-PROTEIN 1), GTP binding [Arabidopsis thaliana] (TAIR:AT5G47960.1); similar to RAB11B [Lotus japonicus] (GB:CAA98178.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras; (InterPro:IPR013753) protein_id AT1G01200.1p transcript_id AT1G01200.1 At1g01210 chr1:000088977 0 W/88977-89081,89173-89263,89405-89529 gene_syn F6F3.2, F6F3_2 product DNA-directed RNA polymerase III family protein go_component nucleus|GO:0005634||RCA go_process RNA elongation|GO:0006354||RCA go_process regulation of transcription, DNA-dependent|GO:0006355||RCA go_function DNA binding|GO:0003677||RCA go_function transcription factor activity|GO:0003700||RCA go_function DNA-directed RNA polymerase activity|GO:0003899||RCA note similar to DNA-directed RNA polymerase III family protein [Arabidopsis thaliana] (TAIR:AT4G07950.1); similar to Os02g0672700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047708.1); similar to DNA-directed RNA polymerase, subunit C11/M/9 [Medicago truncatula] (GB:ABE90355.1); contains InterPro domain Zinc finger TFIIS-type 2; (InterPro:IPR013138); contains InterPro domain DNA-directed RNA polymerase, subunit C11/M/9; (InterPro:IPR012164); contains InterPro domain DNA-directed RNA polymerase, M/15 kDa subunit; (InterPro:IPR001529); contains InterPro domain Transcription factor TFIIS; (InterPro:IPR001222) protein_id AT1G01210.1p transcript_id AT1G01210.1 At1g01220 chr1:000091750 0 W/91750-92070,92270-92501,92569-92933,93045-93171,93271-94281,94357-95075,95160-95552 gene_syn F6F3.3, F6F3_3 product GHMP kinase-related go_component cytoplasm|GO:0005737||IEA go_process metabolic process|GO:0008152||IEA go_process phosphorylation|GO:0016310||IEA go_function galactokinase activity|GO:0004335||RCA go_function ATP binding|GO:0005524||RCA note similar to GHMP kinase-related [Arabidopsis thaliana] (TAIR:AT5G14470.1); similar to Os03g0115100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048749.1); similar to GHMP kinases putative ATP-binding protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF93641.1); contains InterPro domain GHMP kinase, C terminal; (InterPro:IPR013750); contains InterPro domain Mevalonate and galactokinase; (InterPro:IPR006206); contains InterPro domain L-fucokinase; (InterPro:IPR012887); contains InterPro domain Acyl-CoA dehydrogenase, middle and N-terminal; (InterPro:IPR009100); contains InterPro domain GHMP kinase; (InterPro:IPR006204) protein_id AT1G01220.1p transcript_id AT1G01220.1 At1g01225 chr1:000096064 0 W/96064-96157,96554-97242 product NC domain-containing protein-related go_component cellular_component|GO:0005575||ND note similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G00905.1); similar to Os09g0526800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063728.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD09241.1); similar to Os08g0546900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062424.1); contains InterPro domain NC; (InterPro:IPR007053) protein_id AT1G01225.1p transcript_id AT1G01225.1 At1g01230 chr1:000097620 0 W/97620-97805,98457-98605,98908-99046 gene_syn F6F3.4, F6F3_4 product ORMDL family protein go_component endoplasmic reticulum|GO:0005783||RCA go_process protein folding|GO:0006457||RCA go_function molecular_function|GO:0003674||ND note similar to ORMDL family protein [Arabidopsis thaliana] (TAIR:AT5G42000.1); similar to Os02g0673600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047715.1); similar to unknown [Narcissus pseudonarcissus] (GB:AAL69388.1); similar to OSIGBa0103M18.2 [Oryza sativa (indica cultivar-group)] (GB:CAH66850.1); contains InterPro domain ORMDL; (InterPro:IPR007203) protein_id AT1G01230.1p transcript_id AT1G01230.1 At1g01240 chr1:000100683 0 W/100683-101678 gene_syn F633.5, F633_5, F6F3.27 product unknown protein go_process N-terminal protein myristoylation|GO:0006499|12912986|IEA note similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G46550.1); similar to Os09g0363500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062992.1); similar to Os08g0400300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061754.1); similar to hypothetical protein MtrDRAFT_AC145165g14v1 [Medicago truncatula] (GB:ABE91800.1) protein_id AT1G01240.1p transcript_id AT1G01240.1 At1g01240 chr1:000100683 0 W/100683-101678 gene_syn F633.5, F633_5, F6F3.27 product unknown protein note similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G46550.1); similar to Os09g0363500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062992.1); similar to Os08g0400300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061754.1); similar to hypothetical protein MtrDRAFT_AC145165g14v1 [Medicago truncatula] (GB:ABE91800.1) protein_id AT1G01240.2p transcript_id AT1G01240.2 At1g01240 chr1:000100683 0 W/100683-101678 gene_syn F633.5, F633_5, F6F3.27 product unknown protein note similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G46550.1); similar to Os09g0363500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062992.1); similar to Os08g0400300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061754.1); similar to hypothetical protein MtrDRAFT_AC145165g14v1 [Medicago truncatula] (GB:ABE91800.1) protein_id AT1G01240.3p transcript_id AT1G01240.3 At1g01250 chr1:000104731 0 C/104731-105309 gene_syn F6F3.6, F6F3_6 function encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. product AP2 domain-containing transcription factor, putative go_component nucleus|GO:0005634||IC go_process regulation of transcription, DNA-dependent|GO:0006355||RCA go_function DNA binding|GO:0003677||RCA go_function transcription factor activity|GO:0003700|11118137|ISS go_function transcription factor activity|GO:0003700||RCA note similar to TNY (TINY), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G25810.1); similar to Os04g0549700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053486.1); similar to HvCBF7 [Hordeum vulgare subsp. vulgare] (GB:AAX23704.1); similar to OSIGBa0134H18.4 [Oryza sativa (indica cultivar-group)] (GB:CAH67502.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) protein_id AT1G01250.1p transcript_id AT1G01250.1 At1g01260 chr1:000109595 0 W/109595-111367 gene_syn F6F3.7, F6F3_7 product basic helix-loop-helix (bHLH) family protein go_component nucleus|GO:0005634||IEA go_process regulation of transcription|GO:0045449|11118137|TAS go_function DNA binding|GO:0003677||RCA go_function transcription factor activity|GO:0003700|11118137|ISS go_function transcription factor activity|GO:0003700|12679534|ISS note similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT2G46510.1); similar to Os01g0235700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042524.1); similar to bHLH protein -like [Oryza sativa (japonica cultivar-group)] (GB:BAD81265.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) protein_id AT1G01260.1p transcript_id AT1G01260.1 At1g01260 chr1:000109595 0 W/109595-111367 gene_syn F6F3.7, F6F3_7 product basic helix-loop-helix (bHLH) family protein go_component nucleus|GO:0005634||IEA note similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT2G46510.1); similar to Os01g0235700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042524.1); similar to bHLH protein -like [Oryza sativa (japonica cultivar-group)] (GB:BAD81265.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) protein_id AT1G01260.2p transcript_id AT1G01260.2 At1g01270 chr1:000111890 0 C/111890-111961 gene_syn 51947.TRNA-GLN-1 product pre-tRNA go_process translational elongation|GO:0006414|8980477|TAS go_function triplet codon-amino acid adaptor activity|GO:0030533|8980477|TAS note tRNA-Gln (anticodon: CTG) At1g01280 chr1:000112290 0 W/112290-113195,113279-113905 gene_syn F6F3.8, F6F3_8, cytochrome P450, family 703, subfamily A, polypeptide 2 gene CYP703A2 function member of CYP703A product CYP703A2 (cytochrome P450, family 703, subfamily A, polypeptide 2); oxygen binding go_component endomembrane system|GO:0012505||IEA go_process electron transport|GO:0006118||IEA go_function oxygen binding|GO:0019825||RCA note similar to TT7 (TRANSPARENT TESTA 7), flavonoid 3'-monooxygenase/ oxygen binding [Arabidopsis thaliana] (TAIR:AT5G07990.1); similar to cytochrome P450 [Petunia x hybrida] (GB:BAA92894.1); similar to E-class P450, group I [Medicago truncatula] (GB:ABE91557.1); similar to putative cytochrome P450 family [Sorghum bicolor] (GB:AAL73540.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) protein_id AT1G01280.1p transcript_id AT1G01280.1 At1g01290 chr1:000114299 0 W/114299-114433,114619-115296 gene_syn COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 3, F6F3.9, F6F3_9 gene CNX3 function COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 3. Encodes a protein involved in molybdenum cofactor biosynthesis. Homologous to E.coli MoaC. Expression is low in all tissues examined, except in roots. Appears to have targeting signals for chloroplast or mitochondria product CNX3 (COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 3); catalytic go_function catalytic activity|GO:0003824|7890743|IGI go_component mitochondrion|GO:0005739|7890743|ISS go_component chloroplast|GO:0009507|7890743|ISS go_process Mo-molybdopterin cofactor biosynthetic process|GO:0006777|7890743|IGI note Identical to Molybdopterin biosynthesis protein CNX3 (Molybdenum cofactor biosynthesis enzyme CNX3) (CNX3) [Arabidopsis Thaliana] (GB:Q39056); similar to Molybdopterin cofactor biosynthesis MoaC re (GB:ABE77419.1); contains InterPro domain Molybdopterin cofactor biosynthesis MoaC region; (InterPro:IPR002820) protein_id AT1G01290.1p transcript_id AT1G01290.1 At1g01300 chr1:000117065 0 W/117065-118522 gene_syn F6F3.10, F6F3_10 product aspartyl protease family protein go_component cellulose and pectin-containing cell wall|GO:0009505|16287169|IDA go_process proteolysis|GO:0006508||RCA go_function pepsin A activity|GO:0004194||RCA note similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT3G61820.1); similar to Os01g0598600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043485.1); similar to unknow protein [Oryza sativa (japonica cultivar-group)] (GB:AAT38006.1); similar to Os05g0590000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056485.1); contains InterPro domain Peptidase A1, pepsin; (InterPro:IPR001461); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007) protein_id AT1G01300.1p transcript_id AT1G01300.1 At1g01310 chr1:000120221 0 W/120221-120946 gene_syn F6F3.11, F6F3_11 product allergen V5/Tpx-1-related family protein go_component extracellular region|GO:0005576||RCA go_process biological_process|GO:0008150||ND go_function molecular_function|GO:0003674||ND note similar to pathogenesis-related protein, putative [Arabidopsis thaliana] (TAIR:AT3G09590.1); similar to pathogenisis-related protein 1.2 [Triticum aestivum] (GB:CAA07474.1); contains InterPro domain Ves allergen; (InterPro:IPR002413); contains InterPro domain Allergen V5/Tpx-1 related; (InterPro:IPR001283) protein_id AT1G01310.1p transcript_id AT1G01310.1 At1g01320 chr1:000121582 0 C/121582-123501,123579-123669,123785-123897,123992-124123,124211-124394,124499-124632,124714-124818,124921-125046,125134-125226,125329-125655,125742-125843,125936-125998,126076-126589,126686-126840,126935-127453,127532-127573,127651-127782,127868-127935,128028-128312,128479-128551,128968-129060,129853-129914,130039-130099 gene_syn F6F3.12, F6F3_12 product tetratricopeptide repeat (TPR)-containing protein go_component cellular_component|GO:0005575||ND go_function binding|GO:0005488||IEA note similar to binding [Arabidopsis thaliana] (TAIR:AT4G28080.1); similar to binding [Arabidopsis thaliana] (TAIR:AT1G15290.1); similar to putative tetratricopeptide repeat(TPR)-containing protein [Oryza sativa (japonica cultivar-group)] (GB:BAC84544.1); similar to TPR repeat [Medicago truncatula] (GB:ABE77904.1); similar to OSJNBa0070O11.2 [Oryza sativa (japonica cultivar-group)] (GB:CAE03171.2); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide TPR_1; (InterPro:IPR001440); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Tetratricopeptide TPR_2; (InterPro:IPR013105); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) protein_id AT1G01320.1p transcript_id AT1G01320.1 At1g01340 chr1:000132414 0 C/132414-132744,132824-133218,133303-133539,133641-133752,133911-134206,134289-134501,134582-135118 gene_syn ACBK1, CNGC10, CYCLIC NUCLEOTIDE GATED CHANNEL 10, F6F3.13, F6F3_13 gene ATCNGC10 function member of Cyclic nucleotide gated channel family product ATCNGC10 (CYCLIC NUCLEOTIDE GATED CHANNEL 10); calmodulin binding / cyclic nucleotide binding / ion channel go_component membrane|GO:0016020||IEA go_process ion transport|GO:0006811||IEA go_function ion channel activity|GO:0005216||RCA go_function calmodulin binding|GO:0005516|11782485|ISS go_function calmodulin binding|GO:0005516||RCA go_function cyclic nucleotide binding|GO:0030551||RCA note Identical to Probable cyclic nucleotide-gated ion channel 10 (Cyclic nucleotide- and calmodulin-regulated ion channel 10) (CaM-regulated potassium ion channel) (CNGC10) [Arabidopsis Thaliana] (GB:Q9LNJ0;GB:Q9LKL3); similar to CNGC1 (CYCLIC NUCLEOTIDE GATED CHANNEL 1), calmodulin binding / cation channel/ cyclic nucleotide binding / inward rectifier potassium channel [Arabidopsis thaliana] (TAIR:AT5G53130.1); similar to ATCNGC13 (cyclic nucleotide gated channel 13), calmodulin binding / cyclic nucleotide binding / ion channel [Arabidopsis thaliana] (TAIR:AT4G01010.1); similar to ATCNGC3 (CYCLIC NUCLEOTIDE GATED CHANNEL 3), calmodulin binding / cyclic nucleotide binding / ion channel [Arabidopsis thaliana] (TAIR:AT2G46430.1); similar to Probable cyclic nucleotide-gated ion channel 10 (Cyclic nucleotide-and calmodulin-regulated ion channel 10) (CaM-regulated potassium ion channel) (GB:Q9LNJ0); similar to cyclic nucleotide-gated calmodulin-binding ion channel [Nicotiana tabacum] (GB:AAF33670.1); similar to cyclic nucleotide-gated calmodulin-binding ion channel [Nicotiana tabacum] (GB:AAF33669.1); contains InterPro domain Cyclic nucleotide-binding; (InterPro:IPR000595); contains InterPro domain Ion transport; (InterPro:IPR005821); contains InterPro domain IQ calmodulin-binding region; (InterPro:IPR000048) protein_id AT1G01340.1p transcript_id AT1G01340.1 At1g01350 chr1:000136732 0 W/136732-136816,136935-137758,137848-137966,138522-138778,138863-139114,139203-139345,139488-139568 gene_syn F6F3.14, F6F3.15, F6F3_14, F6F3_15 product zinc finger (CCCH-type/C3HC4-type RING finger) family protein go_function nucleic acid binding|GO:0003676||RCA note similar to zinc finger (CCCH-type/C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G06420.2); similar to Zinc finger C-x8-C-x5-C-x3-H type (and similar), putative [Medicago truncatula] (GB:ABE91004.1); contains InterPro domain Protein of unknown function DUF537; (InterPro:IPR007491); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) protein_id AT1G01350.1p transcript_id AT1G01350.1 At1g01360 chr1:000142138 0 W/142138-142281,142424-142639,142711-142914 gene_syn F6F3.16, F6F3_16 product unknown protein go_component cellular_component|GO:0005575||ND note similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G01026.1); similar to CAPIP1 [Capsicum annuum] (GB:AAT35532.1); contains domain Bet v1-like (SSF55961); contains domain no description (G3D.3.30.530.20) protein_id AT1G01360.1p transcript_id AT1G01360.1 At1g01370 chr1:000143773 0 W/143773-143824,143934-143977,144064-144109,144193-144227,144315-144351,144447-144559,144927-145004,145132-145207,145345-145400 gene_syn CENH3, Centromeric histone H3, F6F3.17, F6F3_17 gene HTR12 function Encodes a centromere-identifying protein histone H3 variant.Localized at centromeres in both mitotic and meiotic cells. product HTR12 (Centromeric histone H3); DNA binding go_process nucleosome assembly|GO:0006334||IEA go_process chromosome organization and biogenesis (sensu Eukaryota)|GO:0007001||IEA go_function DNA binding|GO:0003677||RCA go_component chromosome, pericentric region|GO:0000775|12034896|IDA note Identical to Histone H3-like centromeric protein HTR12 (Centromeric histone CENH3) (HTR12) [Arabidopsis Thaliana] (GB:Q8RVQ9;GB:Q8LCW8;GB:Q9LNI6); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT5G10980.1); similar to histone H3.2 [Arabidopsis thaliana] (TAIR:AT4G40030.3); similar to DNA binding [Arabidopsis thaliana] (TAIR:AT4G40040.2); similar to histone H3 like protein [Arabis gemmifera] (GB:BAC79430.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone H3; (InterPro:IPR000164); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124) protein_id AT1G01370.1p transcript_id AT1G01370.1 At1g01370 chr1:000143773 0 W/143773-143824,143934-143977,144064-144109,144193-144227,144315-144351,144447-144559,144927-145004,145132-145207,145345-145400 gene_syn CENH3, Centromeric histone H3, F6F3.17, F6F3_17 gene HTR12 function Encodes a centromere-identifying protein histone H3 variant.Localized at centromeres in both mitotic and meiotic cells. product HTR12 (Centromeric histone H3); DNA binding go_process nucleosome assembly|GO:0006334||IEA go_process chromosome organization and biogenesis (sensu Eukaryota)|GO:0007001||IEA go_function DNA binding|GO:0003677||RCA go_component chromosome, pericentric region|GO:0000775|12034896|IDA note Identical to Histone H3-like centromeric protein HTR12 (Centromeric histone CENH3) (HTR12) [Arabidopsis Thaliana] (GB:Q8RVQ9;GB:Q8LCW8;GB:Q9LNI6); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT5G10980.1); similar to histone H3.2 [Arabidopsis thaliana] (TAIR:AT4G40030.3); similar to DNA binding [Arabidopsis thaliana] (TAIR:AT4G40040.2); similar to histone H3 like protein [Arabis gemmifera] (GB:BAC79430.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone H3; (InterPro:IPR000164); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124) protein_id AT1G01370.2p transcript_id AT1G01370.2 At1g01380 chr1:000147267 0 W/147267-147333,147452-147539,147644-147740 gene_syn ENHANCER OF TRY AND CPC 1, F6F3.18, F6F3_18 gene ETC1 function ETC1 is involved in trichome and root hair patterning in Arabidopsis. product ETC1 (ENHANCER OF TRY AND CPC 1); DNA binding / transcription factor go_component nucleus|GO:0005634||IEA go_process regulation of transcription, DNA-dependent|GO:0006355||RCA go_function DNA binding|GO:0003677||RCA go_function transcription factor activity|GO:0003700|11118137|ISS go_function transcription factor activity|GO:0003700||RCA note similar to DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G01060.3); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD61200.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) protein_id AT1G01380.1p transcript_id AT1G01380.1 At1g01390 chr1:000148319 0 C/148319-149761 gene_syn F6F3.19, F6F3_19 product UDP-glucoronosyl/UDP-glucosyl transferase family protein go_process metabolic process|GO:0008152||IEA go_function UDP-glycosyltransferase activity|GO:0008194||RCA go_function transferase activity, transferring glycosyl groups|GO:0016757||ISS go_function transferase activity, transferring glycosyl groups|GO:0016757||RCA note similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT1G01420.1); similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT4G01070.1); similar to Hydroquinone glucosyltransferase (Arbutin synthase) (GB:Q9AR73); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) protein_id AT1G01390.1p transcript_id AT1G01390.1 At1g01400 chr1:000151158 0 C/151158-151298,151393-151731,151932-152002,152086-152149 gene_syn F6F3.20, F6F3_20 product unknown protein go_component cellular_component|GO:0005575||ND go_process biological_process|GO:0008150||ND go_function molecular_function|GO:0003674||ND protein_id AT1G01400.1p transcript_id AT1G01400.1 At1g01410 chr1:000153113 0 W/153113-154198 gene_syn APUM22, ARABIDOPSIS PUMILIO 22, F6F3.21, F6F3_21 gene APUM22 product APUM22 (ARABIDOPSIS PUMILIO 22); RNA binding / binding go_component cellular_component|GO:0005575||ND go_function RNA binding|GO:0003723||IEA go_function binding|GO:0005488||IEA note similar to binding [Arabidopsis thaliana] (TAIR:AT5G64490.1); similar to pumilio protein 3 [Trypanosoma cruzi] (GB:AAQ84132.1); similar to pumilio/PUF RNA binding protein 3 [Trypanosoma cruzi strain CL Brener] (GB:XP_806089.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain Pumilio/Puf RNA-binding; (InterPro:IPR001313) protein_id AT1G01410.1p transcript_id AT1G01410.1 At1g01420 chr1:000154566 0 C/154566-156011 gene_syn F6F3.22, F6F3_22 product UDP-glucoronosyl/UDP-glucosyl transferase family protein go_component cellular_component|GO:0005575||ND go_process metabolic process|GO:0008152||IEA go_function UDP-glycosyltransferase activity|GO:0008194||RCA go_function transferase activity, transferring glycosyl groups|GO:0016757||ISS go_function transferase activity, transferring glycosyl groups|GO:0016757||RCA note similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT1G01390.1); similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT4G01070.1); similar to Hydroquinone glucosyltransferase (Arbutin synthase) (GB:Q9AR73); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) protein_id AT1G01420.1p transcript_id AT1G01420.1 At1g01430 chr1:000156953 0 C/156953-157756,157829-158112,158254-158536 gene_syn F6F3.23, F6F3_23 product unknown protein go_component cellular_component|GO:0005575||ND go_process biological_process|GO:0008150||ND note similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G01080.1); similar to unknown protein Cr17 [Brassica napus] (GB:AAX51387.1); contains InterPro domain Protein of unknown function DUF231, plant; (InterPro:IPR004253) protein_id AT1G01430.1p transcript_id AT1G01430.1 At1g01440 chr1:000159935 0 C/159935-159992,160079-160302,160418-160478,160568-162219 gene_syn F6F3.24, F6F3_24 product extra-large G-protein-related go_component cellular_component|GO:0005575||ND go_process biological_process|GO:0008150||ND go_function molecular_function|GO:0003674||ND note similar to extra-large G-protein-related [Arabidopsis thaliana] (TAIR:AT4G01090.1); similar to unknown [Striga asiatica] (GB:ABE66402.1) protein_id AT1G01440.1p transcript_id AT1G01440.1 At1g01448 chr1:000163419 0 W/163419-163516,163934-164135,164225-164576 function Potential natural antisense gene, locus overlaps with AT1G01450 product other RNA product other RNA At1g01448 chr1:000163431 0 W/163431-163516,163934-164103,164225-164686,164771-165380,165449-166239 function Potential natural antisense gene, locus overlaps with AT1G01450 product other RNA At1g01448 chr1:000163432 0 W/163432-163516,163617-164107,164230-164687 function Potential natural antisense gene, locus overlaps with AT1G01450 product other RNA product other RNA At1g01450 chr1:000164105 0 C/164105-165517 gene_syn F22L4.1, F22L4_1 product protein kinase-related go_component cellular_component|GO:0005575||ND go_process protein amino acid phosphorylation|GO:0006468||IEA go_function protein threonine/tyrosine kinase activity|GO:0004712|16429265|ISS go_function kinase activity|GO:0016301||RCA note similar to kinase [Arabidopsis thaliana] (TAIR:AT1G64300.2); similar to Os05g0585800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056458.1); similar to photoreceptor [Ceratodon purpureus] (GB:CAA71838.1); similar to Os01g0621600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043605.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein of unknown function DUF1221; (InterPro:IPR010632); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) protein_id AT1G01450.1p transcript_id AT1G01450.1 At1g01460 chr1:000169115 0 W/169115-169257,169347-169509,169600-169710,169806-169993,170071-170162,170266-170313,170412-170507,170622-170760,170851-171154 gene_syn ATPIPK11, F22L4.2, F22L4_2 function Type I phosphatidylinositol-4-phosphate 5-kinase, subfamily A. product phosphatidylinositol-4-phosphate 5-kinase family protein go_component cellular_component|GO:0005575||ND go_process biological_process|GO:0008150||ND go_function 1-phosphatidylinositol-4-phosphate 5-kinase activity|GO:0016308||RCA note Identical to Phosphatidylinositol-4-phosphate 5-kinase 10 (EC 2.7.1.68) (AtPIP5K10) (1-phosphatidylinositol-4-phosphate kinase 10) (PtdIns(4)P-5-kinase 10) (Diphosphoinositide kinase 10) (PIP5K10) [Arabidopsis Thaliana] (GB:Q9LMN1;GB:O23705); similar to ATPIPK10 (ARABIDOPSIS PHOSPHATIDYLINOSITOL PHOSPHATE KINASE 10), 1-phosphatidylinositol-4-phosphate 5-kinase [Arabidopsis thaliana] (TAIR:AT4G01190.1); similar to putative phosphatidylinositol 4-phosphate 5-kinase [Nicotiana rustica] (GB:AAF80332.1); contains InterPro domain Phosphatidylinositol-4-phosphate 5-kinase; (InterPro:IPR002498) protein_id AT1G01460.1p transcript_id AT1G01460.1 At1g01470 chr1:000172295 0 C/172295-172544,172621-172826 gene_syn F22L4.3, F22L4_3, LATE EMBRYOGENESIS ABUNDANT 14, LIGHT STRESS-REGULATED 3, LSR3 gene LEA14 function Encodes late-embryogenesis abundant protein whose mRNA levels are induced in response to wounding and light stress. Might be involved in protection against dessication. product LEA14 (LATE EMBRYOGENESIS ABUNDANT 14) go_process response to desiccation|GO:0009269||RCA go_process embryonic development ending in seed dormancy|GO:0009793||RCA go_function molecular_function|GO:0003674||ND go_component cellular_component|GO:0005575||ND go_process response to wounding|GO:0009611|12068110|IEP go_process response to high light intensity|GO:0009644|11683875|IEP go_function molecular_function|GO:0003674||ND note Identical to Putative desiccation-related protein LEA14 (LEA14) [Arabidopsis Thaliana] (GB:O03983;GB:Q42314); similar to late embryogenesis abundant protein, putative / LEA protein, putative [Arabidopsis thaliana] (TAIR:AT2G46140.1); similar to Late embryogenesis abundant protein Lea14-A (GB:P46518); contains InterPro domain Late embryogenesis abundant protein 2; (InterPro:IPR004864) protein_id AT1G01470.1p transcript_id AT1G01470.1 At1g01480 chr1:000175862 0 W/175862-176032,176207-176338,176592-176752,177025-178051 gene_syn 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE, 1-Amino-cyclopropane-1-carboxylate synthase 2, AT-ACC2, EC 4.4.1.14, F22L4.4, F22L4_4, S-ADENOSYL-L-METHIONINE METHYLTHIOADENOSINE-LYASE gene ACS2 function a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family, isolated from a flower-specific cDNA library. product ACS2 (1-Amino-cyclopropane-1-carboxylate synthase 2) go_process ethylene biosynthetic process|GO:0009693|1357670|TAS go_process ethylene biosynthetic process|GO:0009693|1438312|TAS go_component cellular_component|GO:0005575||ND go_process ethylene biosynthetic process|GO:0009693|16311726|TAS go_function 1-aminocyclopropane-1-carboxylate synthase activity|GO:0016847|8566772|IDA note Identical to 1-aminocyclopropane-1-carboxylate synthase 2 (EC 4.4.1.14) (ACC synthase 2) (S-adenosyl-L-methionine methylthioadenosine-lyase 2) (ACS2) [Arabidopsis Thaliana] (GB:Q06402;GB:Q941E7); similar to ACS1 (ACC SYNTHASE 1), 1-aminocyclopropane-1-carboxylate synthase [Arabidopsis thaliana] (TAIR:AT3G61510.1); similar to 1-aminocyclopropane-1-carboxylate synthase (GB:AAA97516.1); similar to 1-aminocyclopropane-1-carboxylate synthase [Diospyros kaki] (GB:BAB89349.1); similar to ACC synthase [Brassica oleracea var. italica] (GB:AAL37504.1); contains InterPro domain 1-aminocyclopropane-1-carboxylate synthase; (InterPro:IPR001176); contains InterPro domain Aminotransferases class-I pyridoxal-phosphate-binding site; (InterPro:IPR004838); contains InterPro domain Aminotransferase, class I and II; (InterPro:IPR004839) protein_id AT1G01480.1p transcript_id AT1G01480.1 At1g01480 chr1:000176607 0 W/176607-176752,177025-178051 gene_syn 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE, 1-Amino-cyclopropane-1-carboxylate synthase 2, AT-ACC2, EC 4.4.1.14, F22L4.4, F22L4_4, S-ADENOSYL-L-METHIONINE METHYLTHIOADENOSINE-LYASE gene ACS2 function a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family, isolated from a flower-specific cDNA library. product ACS2 (1-Amino-cyclopropane-1-carboxylate synthase 2) go_process ethylene biosynthetic process|GO:0009693|1357670|TAS go_process ethylene biosynthetic process|GO:0009693|1438312|TAS go_component cellular_component|GO:0005575||ND go_process ethylene biosynthetic process|GO:0009693|16311726|TAS go_function 1-aminocyclopropane-1-carboxylate synthase activity|GO:0016847|8566772|IDA note Identical to 1-aminocyclopropane-1-carboxylate synthase 2 (EC 4.4.1.14) (ACC synthase 2) (S-adenosyl-L-methionine methylthioadenosine-lyase 2) (ACS2) [Arabidopsis Thaliana] (GB:Q06402;GB:Q941E7); similar to ACS1 (ACC SYNTHASE 1), 1-aminocyclopropane-1-carboxylate synthase [Arabidopsis thaliana] (TAIR:AT3G61510.1); similar to 1-aminocyclopropane-1-carboxylate synthase (GB:AAA97516.1); contains InterPro domain 1-aminocyclopropane-1-carboxylate synthase; (InterPro:IPR001176); contains InterPro domain Aminotransferases class-I pyridoxal-phosphate-binding site; (InterPro:IPR004838); contains InterPro domain Aminotransferase, class I and II; (InterPro:IPR004839) protein_id AT1G01480.2p transcript_id AT1G01480.2 At1g01490 chr1:000180401 0 C/180401-180852,181347-181422,182061-182066 gene_syn F22L4.5, F22L4_5 product heavy-metal-associated domain-containing protein go_component cellular_component|GO:0005575||ND go_process metal ion transport|GO:0030001||IEA go_function metal ion binding|GO:0046872||RCA note similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G23760.1); similar to Unknown (protein for MGC:78286) [Mus musculus] (GB:AAH71252.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) protein_id AT1G01490.1p transcript_id AT1G01490.1 At1g01490 chr1:000180401 0 C/180401-180852,181347-181422,182061-182066 gene_syn F22L4.5, F22L4_5 product metal ion binding go_process metal ion transport|GO:0030001||IEA go_function metal ion binding|GO:0046872||RCA note similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G23760.1); similar to Unknown (protein for MGC:78286) [Mus musculus] (GB:AAH71252.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) protein_id AT1G01490.2p transcript_id AT1G01490.2 At1g01500 chr1:000185260 0 W/185260-186009,186340-186573 gene_syn F22L4.17, F22L4_17 product unknown protein go_component cellular_component|GO:0005575||ND go_process biological_process|GO:0008150||ND go_function molecular_function|GO:0003674||ND note similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G19400.2); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAN65010.1); similar to Os03g0775600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051432.1); contains domain 2-HYDROXYACID DEHYDROGENASE (PTHR10996:SF1); contains domain 2-HYDROXYACID DEHYDROGENASE (PTHR10996) protein_id AT1G01500.1p transcript_id AT1G01500.1 At1g01510 chr1:000187235 0 W/187235-187822,188011-188176,188284-188414,188529-189320,189417-189464,189562-189675,189765-189836 gene_syn ANGUSTIFOLIA, F22L4.6, F22L4_6 gene AN function Encodes a homolog of human CtBP. Mutant has longer and thicker leaves than wild type. Involved in controlling polar cell expansion in the leaf width direction. product AN (ANGUSTIFOLIA) go_component cellular_component|GO:0005575||ND go_process microtubule cytoskeleton organization and biogenesis|GO:0000226|11889033|IMP go_process leaf morphogenesis|GO:0009965|8625845|IMP go_process monopolar cell growth|GO:0042814|8625845|IMP go_function protein binding|GO:0005515|11889033|IPI note similar to oxidoreductase family protein [Arabidopsis thaliana] (TAIR:AT1G12550.1); similar to angustifolia [Ipomoea nil] (GB:BAC58020.1); similar to Os10g0533000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065152.1); similar to Putative C-terminal binding protein [Oryza sativa (japonica cultivar-group)] (GB:AAM19105.1); contains InterPro domain D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; (InterPro:IPR006140) protein_id AT1G01510.1p transcript_id AT1G01510.1 At1g01520 chr1:000190596 0 W/190596-190828,190941-190998,191138-191258,191341-191475,191579-191692,191780-191889,191967-192026,192107-192139 gene_syn F22L4.18, F22L4_18 product myb family transcription factor go_component nucleus|GO:0005634||IEA go_process regulation of transcription, DNA-dependent|GO:0006355||RCA go_process response to salt stress|GO:0009651|16463103|IEP go_function DNA binding|GO:0003677||RCA go_function transcription factor activity|GO:0003700|11118137|ISS go_function transcription factor activity|GO:0003700||RCA note similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT4G01280.1); similar to MYB transcription factor MYB133 [Glycine max] (GB:ABH02857.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) protein_id AT1G01520.1p transcript_id AT1G01520.1 At1g01530 chr1:000192640 0 C/192640-193071,193351-193662 gene_syn AGAMOUS-LIKE 28, AGL28, F22L4.7, F22L4_7 gene AGL28 product AGL28 (AGAMOUS-LIKE 28); DNA binding / transcription factor go_component nucleus|GO:0005634||IEA go_process regulation of transcription, DNA-dependent|GO:0006355||IEA go_function DNA binding|GO:0003677||RCA go_function transcription factor activity|GO:0003700|11118137|ISS go_function transcription factor activity|GO:0003700|12837945|ISS note similar to MADS-box protein (AGL23) [Arabidopsis thaliana] (TAIR:AT1G65360.1); similar to Transcription factor, MADS-box [Medicago truncatula] (GB:ABE91589.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100) protein_id AT1G01530.1p transcript_id AT1G01530.1 At1g01540 chr1:000195980 0 W/195980-196542,197115-197219,197300-197422,197501-197671,197775-197904,197974-198183,198267-198383 gene_syn F22L4.8, F22L4_8 product protein kinase family protein go_component cellular_component|GO:0005575||ND go_process protein amino acid phosphorylation|GO:0006468||IEA go_function kinase activity|GO:0016301||RCA note similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G02630.1); similar to Protein kinase [Medicago truncatula] (GB:ABE93550.1); similar to Os03g0125600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048818.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) protein_id AT1G01540.2p transcript_id AT1G01540.2 At1g01540 chr1:000195980 0 W/195980-196542,197115-197219,197300-197422,197501-197671,197775-197973 gene_syn F22L4.8, F22L4_8 product protein kinase family protein go_component cellular_component|GO:0005575||ND go_process protein amino acid phosphorylation|GO:0006468||IEA go_function kinase activity|GO:0016301||RCA note similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G01330.1); similar to Protein kinase [Medicago truncatula] (GB:ABE93550.1); similar to Os03g0125600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048818.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) protein_id AT1G01540.1p transcript_id AT1G01540.1 At1g01550 chr1:000200526 0 W/200526-201575 gene_syn BYPASS 1, F22L4.9, F22L4_9 gene BPS1 function BYPASS1, required to prevent constitutive production of a root-derived graft-transmissible signal product BPS1 (BYPASS 1) go_component chloroplast|GO:0009507||IEA go_function molecular_function|GO:0003674||ND note similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G46080.1); similar to unknown [Solanum tuberosum] (GB:ABB16971.1) protein_id AT1G01550.1p transcript_id AT1G01550.1 At1g01550 chr1:000200526 0 W/200526-201575 gene_syn BYPASS 1, F22L4.9, F22L4_9 gene BPS1 function BYPASS1, required to prevent constitutive production of a root-derived graft-transmissible signal product BPS1 (BYPASS 1) go_component chloroplast|GO:0009507||IEA go_function molecular_function|GO:0003674||ND note similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G46080.1); similar to unknown [Solanum tuberosum] (GB:ABB16971.1) protein_id AT1G01550.2p transcript_id AT1G01550.2 At1g01560 chr1:000202345 0 W/202345-202508,202782-202911,202991-203128,203267-203662 gene_syn Arabidopsis thaliana MAP kinase 11, F22L4.10, F22L4_10 gene ATMPK11 function member of MAP Kinase product ATMPK11 (Arabidopsis thaliana MAP kinase 11); MAP kinase/ kinase go_process signal transduction|GO:0007165|12119167|IC go_process response to abscisic acid stimulus|GO:0009737|16258012|IEP go_function MAP kinase activity|GO:0004707|12119167|ISS go_function kinase activity|GO:0016301||RCA go_component cellular_component|GO:0005575||ND go_function MAP kinase activity|GO:0004707|11544109|ISS note Identical to Mitogen-activated protein kinase 11 (EC 2.7.11.24) (MAP kinase 11) (AtMPK11) (MPK11) [Arabidopsis Thaliana] (GB:Q9LMM5); similar to ATMPK4 (MAP KINASE 4), MAP kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G01370.1); similar to double HA-tagged mitogen activated protein kinase 11 [synthetic construct] (GB:ABG54338.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) protein_id AT1G01560.1p transcript_id AT1G01560.1 At1g01570 chr1:000205176 0 W/205176-205949,206692-207243,207325-207435 gene_syn F22L4.11, F22L4_11 product fringe-related protein go_component endomembrane system|GO:0012505||IEA go_process biological_process|GO:0008150||ND go_function transferase activity, transferring glycosyl groups|GO:0016757||ISS note similar to fringe-related protein [Arabidopsis thaliana] (TAIR:AT4G00300.1); similar to hypothetical protein [Trifolium pratense] (GB:BAE71200.1); contains InterPro domain Protein of unknown function DUF604; (InterPro:IPR006740) protein_id AT1G01570.1p transcript_id AT1G01570.1 At1g01580 chr1:000209395 0 W/209395-209608,209764-209866,209950-210144,210385-210619,211052-211379,211474-211717,211855-212573,212671-212810 gene_syn ATFRO2, F22L4.12, F22L4_12, FERRIC CHELATE REDUCTASE-DEFECTIVE 1, FERRIC REDUCTION OXIDASE 2, FRD1 gene FRO2 function Encodes the low-iron-inducible ferric chelate reductase responsible for reduction of iron at the root surface. It is likely to be the major Fe(III) chelate reductase in Arabidopsis iron metabolism. Coordinately regulated with IRT1, the major transporter responsible for high-affinity iron uptake from the soil, at both transcriptional and posttranscriptional levels. Steady state mRNA levels are regulated by several metals. Its transcription is regulated by FIT1. product FRO2 (FERRIC REDUCTION OXIDASE 2); ferric-chelate reductase go_component membrane|GO:0016020||RCA go_process electron transport|GO:0006118||RCA go_function ferric-chelate reductase activity|GO:0000293||RCA go_process iron chelate transport|GO:0015688|10067892|IMP go_function ferric-chelate reductase activity|GO:0000293|10067892|IMP go_function ferric-chelate reductase activity|GO:0000293|16006655|IDA note similar to FRO1 (FERRIC REDUCTION OXIDASE 1), ferric-chelate reductase [Arabidopsis thaliana] (TAIR:AT1G01590.1); similar to ATFRO4/FRO4 (FERRIC REDUCTION OXIDASE 4), ferric-chelate reductase [Arabidopsis thaliana] (TAIR:AT5G23980.1); similar to ATFRO3/FRO3 (FERRIC REDUCTION OXIDASE 3), ferric-chelate reductase [Arabidopsis thaliana] (TAIR:AT1G23020.1); similar to ferric-chelate reductase [Lycopersicon esculentum] (GB:AAP46144.1); similar to ferric-chelate reductase [Pisum sativum] (GB:AAK95654.2); similar to ferric reductase [Medicago truncatula] (GB:AAR15416.1); contains InterPro domain Cytochrome b-245, heavy chain; (InterPro:IPR000778); contains InterPro domain Ferric reductase, NAD binding; (InterPro:IPR013121); contains InterPro domain FAD-binding 8; (InterPro:IPR013112); contains InterPro domain Ferric reductase-like transmembrane component, N-terminal; (InterPro:IPR013130); contains InterPro domain Ferric reductase-like transmembrane component; (InterPro:IPR002916) protein_id AT1G01580.1p transcript_id AT1G01580.1 At1g01590 chr1:000214229 0 W/214229-214406,214480-214582,214697-214897,215317-215554,215633-215960,216044-216293,216414-217090,217165-217304 gene_syn ATFRO1, F22L4.13, F22L4_13, FERRIC REDUCTION OXIDASE 1 gene FRO1 function Encodes a ferric-chelate reductase that is expressed at extremely low levels in Fe deficiency-induced seedlings. product FRO1 (FERRIC REDUCTION OXIDASE 1); ferric-chelate reductase go_component membrane|GO:0016020||RCA go_process electron transport|GO:0006118||RCA go_function ferric-chelate reductase activity|GO:0000293||RCA go_function ferric-chelate reductase activity|GO:0000293|10067892|IMP note similar to FRO2 (FERRIC REDUCTION OXIDASE 2), ferric-chelate reductase [Arabidopsis thaliana] (TAIR:AT1G01580.1); similar to ATFRO4/FRO4 (FERRIC REDUCTION OXIDASE 4), ferric-chelate reductase [Arabidopsis thaliana] (TAIR:AT5G23980.1); similar to ATFRO3/FRO3 (FERRIC REDUCTION OXIDASE 3), ferric-chelate reductase [Arabidopsis thaliana] (TAIR:AT1G23020.1); similar to ferric-chelate reductase [Lycopersicon esculentum] (GB:AAP46144.1); similar to iron reductase [Pisum sativum] (GB:AAU94355.1); similar to ferric-chelate reductase [Pisum sativum] (GB:AAK95654.2); contains InterPro domain Ferric reductase, NAD binding; (InterPro:IPR013121); contains InterPro domain NADH:cytochrome b5 reductase (CBR); (InterPro:IPR001834); contains InterPro domain FAD-binding 8; (InterPro:IPR013112); contains InterPro domain Ferric reductase-like transmembrane component, N-terminal; (InterPro:IPR013130); contains InterPro domain Ferric reductase-like transmembrane component; (InterPro:IPR002916) protein_id AT1G01590.1p transcript_id AT1G01590.1 At1g01600 chr1:000219200 0 W/219200-219621,219752-220994 gene_syn F22L4.14, F22L4_14, cytochrome P450, family 86, subfamily A, polypeptide 4 gene CYP86A4 function Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed significantly at highest level in mature stems and flowers. product CYP86A4 (cytochrome P450, family 86, subfamily A, polypeptide 4); oxygen binding go_function oxygen binding|GO:0019825||RCA go_process fatty acid metabolic process|GO:0006631|15709153|IDA go_function fatty acid (omega-1)-hydroxylase activity|GO:0008393|15709153|IDA note similar to CYP86A8 (LACERATA), fatty acid (omega-1)-hydroxylase/ oxygen binding [Arabidopsis thaliana] (TAIR:AT2G45970.1); similar to CYP86A7 (cytochrome P450, family 86, subfamily A, polypeptide 7), oxygen binding [Arabidopsis thaliana] (TAIR:AT1G63710.1); similar to CYP86A2 (ABERRANT INDUCTION OF TYPE THREE GENES 1), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G00360.1); similar to cytochrome P450 monooxygenase CYP86A24 [Glycine max] (GB:ABC68403.1); similar to cytochrome P450 [Triticum aestivum] (GB:AAG17470.1); similar to E-class P450, group I [Medicago truncatula] (GB:ABE91393.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) protein_id AT1G01600.1p transcript_id AT1G01600.1 At1g01610 chr1:000221950 0 C/221950-222359,222622-223096,223551-223866,223945-224255 gene_syn ATGPAT4, F22L4.15, F22L4_15, GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 4, GPAT4 gene ATGPAT4/GPAT4 function Encodes a protein with glycerol-3-phosphate acyltransferase activity. product ATGPAT4/GPAT4 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 4); 1-acylglycerol-3-phosphate O-acyltransferase/ acyltransferase go_process metabolic process|GO:0008152||RCA go_function 1-acylglycerol-3-phosphate O-acyltransferase activity|GO:0003841|12897259|IGI go_function acyltransferase activity|GO:0008415||RCA note Identical to Glycerol-3-phosphate acyltransferase 4 (EC 2.3.1.15) (AtGPAT4) (GPAT4) [Arabidopsis Thaliana] (GB:Q9LMM0;GB:Q8W4N0); similar to ATGPAT6/GPAT6 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 6), 1-acylglycerol-3-phosphate O-acyltransferase/ acyltransferase [Arabidopsis thaliana] (TAIR:AT2G38110.1); similar to phospholipid/glycerol acyltransferase family protein [Arabidopsis thaliana] (TAIR:AT4G00400.1); similar to Phospholipid/glycerol acyltransferase [Medicago truncatula] (GB:ABE91390.1); contains InterPro domain Phospholipid/glycerol acyltransferase; (InterPro:IPR002123) protein_id AT1G01610.1p transcript_id AT1G01610.1 At1g01620 chr1:000225986 0 C/225986-226081,226171-226311,226396-226691,226849-226960 gene_syn F22L4.16, F22L4_16, PIP1;3, PIP1C, PLASMA MEMBRANE INTRINSIC PROTEIN 1;3, TMP-B gene PIP1C function a member of the plasma membrane intrinsic protein subfamily PIP1. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed ubiquitously and protein level decreases slightly during leaf development. product PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1;3) go_component plasma membrane|GO:0005886|7920711|IDA go_process water transport|GO:0006833|7920711|IDA go_process response to water deprivation|GO:0009414|16235111|IEP go_function water channel activity|GO:0015250|7920711|IDA note Identical to Aquaporin PIP1.3 (Plasma membrane intrinsic protein 1c) (PIP1c) (Transmembrane protein B) (TMP-B) (PIP1.3) [Arabidopsis Thaliana] (GB:Q08733;GB:Q8W4E5); similar to TMP-C (plasma membrane intrinsic protein 1,4), water channel [Arabidopsis thaliana] (TAIR:AT4G00430.1); similar to plasma membrane aquaporin (PAQ1) [Raphanus sativus] (GB:BAA32777.1); contains InterPro domain Aquaporin; (InterPro:IPR012269); contains InterPro domain Major intrinsic protein; (InterPro:IPR000425) protein_id AT1G01620.2p transcript_id AT1G01620.2 At1g01620 chr1:000225986 0 C/225986-226081,226171-226311,226396-226691,226849-227176 gene_syn F22L4.16, F22L4_16, PIP1;3, PIP1C, PLASMA MEMBRANE INTRINSIC PROTEIN 1;3, TMP-B gene PIP1C function a member of the plasma membrane intrinsic protein subfamily PIP1. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed ubiquitously and protein level decreases slightly during leaf development. product PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1;3); water channel go_component plasma membrane|GO:0005886|7920711|TAS go_component membrane|GO:0016020||RCA go_process transport|GO:0006810||RCA go_process response to water deprivation|GO:0009414|16235111|IEP go_process response to salt stress|GO:0009651|16183846|IEP go_function water channel activity|GO:0015250||ISS go_component plasma membrane|GO:0005886|7920711|IDA go_process water transport|GO:0006833|7920711|IDA go_process response to water deprivation|GO:0009414|16235111|IEP go_function water channel activity|GO:0015250|7920711|IDA note Identical to Aquaporin PIP1.3 (Plasma membrane intrinsic protein 1c) (PIP1c) (Transmembrane protein B) (TMP-B) (PIP1.3) [Arabidopsis Thaliana] (GB:Q08733;GB:Q8W4E5); similar to TMP-C (plasma membrane intrinsic protein 1,4), water channel [Arabidopsis thaliana] (TAIR:AT4G00430.1); similar to plasma membrane aquaporin (PAQ1) [Raphanus sativus] (GB:BAA32777.1); contains InterPro domain Aquaporin; (InterPro:IPR012269); contains InterPro domain Major intrinsic protein; (InterPro:IPR000425) protein_id AT1G01620.1p transcript_id AT1G01620.1 At1g01630 chr1:000229206 0 W/229206-229343,229429-229724,229829-229934,230349-230459,230559-230675 gene_syn T1N6.1, T1N6_1 product SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative go_component cellular_component|GO:0005575||ND go_process transport|GO:0006810||RCA go_function transporter activity|GO:0005215||RCA note similar to SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein [Arabidopsis thaliana] (TAIR:AT1G14820.3); similar to Cellular retinaldehyde binding/alpha-tocopherol transport; Cellular retinaldehyde-binding/triple function, N-terminal [Medicago truncatula] (GB:ABE80207.1); contains InterPro domain Phosphatidylinositol transfer protein-like, N-terminal; (InterPro:IPR011074); contains InterPro domain Cellular retinaldehyde-binding/triple function, C-terminal; (InterPro:IPR001251); contains InterPro domain Cellular retinaldehyde-binding/triple function, N-terminal; (InterPro:IPR008273) protein_id AT1G01630.1p transcript_id AT1G01630.1 At1g01640 chr1:000231164 0 C/231164-231655,231784-231915 gene_syn T1N6.2, T1N6_2 product speckle-type POZ protein-related go_component cellular_component|GO:0005575||ND go_process biological_process|GO:0008150||ND go_function protein binding|GO:0005515|15659098|IPI go_function protein binding|GO:0005515||RCA note similar to speckle-type POZ protein-related [Arabidopsis thaliana] (TAIR:AT3G56230.1); similar to BTB/POZ [Medicago truncatula] (GB:ABE86049.1); contains InterPro domain BTB; (InterPro:IPR000210); contains InterPro domain BTB/POZ; (InterPro:IPR013069) protein_id AT1G01640.1p transcript_id AT1G01640.1 At1g01640 chr1:000231164 0 C/231164-231655,231784-231915 gene_syn T1N6.2, T1N6_2 product speckle-type POZ protein-related go_component cellular_component|GO:0005575||ND go_process biological_process|GO:0008150||ND go_function protein binding|GO:0005515||RCA note similar to speckle-type POZ protein-related [Arabidopsis thaliana] (TAIR:AT3G56230.1); similar to BTB/POZ [Medicago truncatula] (GB:ABE86049.1); contains InterPro domain BTB; (InterPro:IPR000210); contains InterPro domain BTB/POZ; (InterPro:IPR013069) protein_id AT1G01640.2p transcript_id AT1G01640.2 At1g01650 chr1:000233188 0 C/233188-233297,233387-233470,233548-233618,234250-234392,234529-234621,234935-234988,235198-235360,235718-235752,235845-236027,236145-236296,236429-236537 gene_syn T1N6.3, T1N6_3 product peptidase go_component integral to membrane|GO:0016021||IEA go_process proteolysis|GO:0006508||RCA go_function peptidase activity|GO:0008233||RCA note similar to protease-associated (PA) domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G63690.1); similar to growth-on protein GRO11 [Euphorbia esula] (GB:AAL14628.1); contains InterPro domain Peptidase A22, presenilin signal peptide; (InterPro:IPR006639); contains InterPro domain Peptidase A22B, minor histocompatibility antigen H13; (InterPro:IPR007369) protein_id AT1G01650.2p transcript_id AT1G01650.2 At1g01650 chr1:000233188 0 C/233188-233297,233387-233470,233548-233618,234250-234392,234529-234621,234935-234988,235198-235360,235718-235752,235845-236027,236145-236296,236429-236548,236673-236784,236865-237023,237504-237647 gene_syn T1N6.3, T1N6_3 product peptidase go_component endomembrane system|GO:0012505||IEA go_component integral to membrane|GO:0016021||IEA go_process proteolysis|GO:0006508||RCA go_function peptidase activity|GO:0008233||RCA note similar to protease-associated (PA) domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G63690.1); similar to Protease-associated PA; Peptidase A22B, minor histocompatibility antigen H13 [Medicago truncatula] (GB:ABE91379.1); similar to Protease-associated PA; Peptidase A22B, minor histocompatibility antigen H13 [Medicago truncatula] (GB:ABD32820.1); similar to growth-on protein GRO11 [Euphorbia esula] (GB:AAL14628.1); contains InterPro domain Protease-associated PA; (InterPro:IPR003137); contains InterPro domain Peptidase A22, presenilin signal peptide; (InterPro:IPR006639); contains InterPro domain Peptidase A22B, minor histocompatibility antigen H13; (InterPro:IPR007369) protein_id AT1G01650.1p transcript_id AT1G01650.1 At1g01660 chr1:000240057 0 C/240057-240242,240352-240672,240744-240884,240960-241226,241306-241443,241539-241719,241805-241909,241983-242113,242214-242290,242449-242608 gene_syn T1N6.4, T1N6_4 product U-box domain-containing protein go_component ubiquitin ligase complex|GO:0000151||IEA go_process protein ubiquitination|GO:0016567||IEA go_function ubiquitin-protein ligase activity|GO:0004842||IEA note similar to protein kinase family protein / U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G45910.1); similar to Protein kinase; U box [Medicago truncatula] (GB:ABD32822.1); contains InterPro domain U box; (InterPro:IPR003613) protein_id AT1G01660.1p transcript_id AT1G01660.1 At1g01670 chr1:000242943 0 C/242943-243128,243336-243746,244035-244182,244257-244361,244505-244635,244770-244873,245151-245163 gene_syn T1N6.28, T1N6_28 product U-box domain-containing protein go_component ubiquitin ligase complex|GO:0000151||IEA go_process protein ubiquitination|GO:0016567||IEA go_function ubiquitin-protein ligase activity|GO:0004842||IEA note similar to U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G61390.2); similar to putative arm repeat containing protein [Oryza sativa (japonica cultivar-group)] (GB:AAK43506.1); similar to Os10g0552400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065331.1); similar to Protein kinase; U box [Medicago truncatula] (GB:ABD32822.1); contains InterPro domain U box; (InterPro:IPR003613) protein_id AT1G01670.1p transcript_id AT1G01670.1 At1g01680 chr1:000246411 0 C/246411-246608,246731-246853,246949-247078,247167-247268,247362-247492,247577-247680,248191-248329 gene_syn T1N6.5, T1N6_5 product U-box domain-containing protein go_component ubiquitin ligase complex|GO:0000151||IEA go_process protein ubiquitination|GO:0016567||IEA go_function ubiquitin-protein ligase activity|GO:0004842||IEA note similar to U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G01670.1); similar to Protein kinase; U box [Medicago truncatula] (GB:ABD32822.1); contains InterPro domain U box; (InterPro:IPR003613) protein_id AT1G01680.1p transcript_id AT1G01680.1 At1g01690 chr1:000249242 0 W/249242-249306,249543-249693,249774-249930,250017-250151,250536-250588,250669-250863,251004-251066,251143-251184,251260-251316,251399-251440,251539-251594,251680-251827,251922-252006,252121-252221 gene_syn T1N6.6, T1N6_6 product unknown protein go_process biological_process|GO:0008150||ND go_function molecular_function|GO:0003674||ND note similar to PAIR1 protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF93534.1); contains domain PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P (DOWN SYNDROME CRITICAL REGION PROTEIN 5)-RELATED (PTHR21726); contains domain RNASE H1 SMALL SUBUNIT (AYP1)-RELATED (PTHR21726:SF4) protein_id AT1G01690.1p transcript_id AT1G01690.1 At1g01700 chr1:000259495 0 C/259495-259614,259690-260034,260118-260417,260508-260582,260670-260824,260921-261037,261129-261474 gene_syn ATROPGEF2, KINASE PARTNER PROTEIN-LIKE, KPP-LIKE, ROPGEF2, T1N6.8, T1N6_8 gene ATROPGEF2/ROPGEF2 function Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. product ATROPGEF2/ROPGEF2 (KINASE PARTNER PROTEIN-LIKE); Rho guanyl-nucleotide exchange factor/ / protein binding go_component cellular_component|GO:0005575||ND go_process biological_process|GO:0008150||ND go_function molecular_function|GO:0003674||RCA go_function Rho guanyl-nucleotide exchange factor activity|GO:0005089|15980860|IDA go_function protein binding|GO:0005515|15980860|TAS note Identical to Rop guanine nucleotide exchange factor 2 (RopGEF2) (ROPGEF2) [Arabidopsis Thaliana] (GB:Q9LQ89); similar to ATROPGEF3/ROPGEF3 (KINASE PARTNER PROTEIN-LIKE), Rho guanyl-nucleotide exchange factor [Arabidopsis thaliana] (TAIR:AT4G00460.1); similar to Protein of unknown function DUF315 [Medicago truncatula] (GB:ABD32835.1); contains InterPro domain Protein of unknown function DUF315; (InterPro:IPR005512) protein_id AT1G01700.1p transcript_id AT1G01700.1 At1g01710 chr1:000262950 0 W/262950-262965,263047-263139,263232-263299,263369-263444,263526-263572,263645-263770,263857-263934,264073-264160,264280-264392,264520-264582,264657-264712,264797-264901,265021-265077,265336-265437,265578-265626,265777-265845,265952-266029 gene_syn T1N6.10, T1N6.9, T1N6_10, T1N6_9 product acyl-CoA thioesterase family protein go_component cellular_component|GO:0005575||ND go_process acyl-CoA metabolic process|GO:0006637||RCA go_function acyl-CoA thioesterase activity|GO:0016291||RCA go_function cyclic nucleotide binding|GO:0030551||RCA note similar to acyl-CoA thioesterase [Arabidopsis thaliana] (TAIR:AT4G00520.2); similar to hypothetical protein PaerP_01005464 [Pseudomonas aeru (GB:ZP_01292630.1); similar to Os04g0558400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053533.1); similar to OSJNBa0065O17.11 [Oryza sativa (japonica cultivar-group)] (GB:CAE03486.2); contains InterPro domain Acyl-CoA thioesterase; (InterPro:IPR003703); contains InterPro domain Cyclic nucleotide-binding; (InterPro:IPR000595) protein_id AT1G01710.1p transcript_id AT1G01710.1 At1g01720 chr1:000268471 0 W/268471-268630,268717-268994,269083-269514 gene_syn ANAC002, Arabidopsis NAC domain containing protein 2, T1N6.12, T1N6_12 gene ATAF1 function belongs to a large family of putative transcriptional activators with NAC domain. Transcript level increases in response to wounding. product ATAF1 (Arabidopsis NAC domain containing protein 2); transcription factor go_process multicellular organismal development|GO:0007275||RCA go_function transcription factor activity|GO:0003700|11118137|ISS go_component cellular_component|GO:0005575||ND go_process response to wounding|GO:0009611|11516145|IEP go_function transcriptional activator activity|GO:0016563|11516145|TAS note Identical to NAC domain-containing protein 2 (ANAC002) (ATAF1) [Arabidopsis Thaliana] (GB:Q39013;GB:Q9LQ85); similar to ANAC032 (Arabidopsis NAC domain containing protein 32), transcription factor [Arabidopsis thaliana] (TAIR:AT1G77450.1); similar to NAC-domain protein 18 [Brassica napus] (GB:AAP35054.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) protein_id AT1G01720.1p transcript_id AT1G01720.1 At1g01725 chr1:000270016 0 C/270016-270090,270622-270735 product unknown protein go_component endomembrane system|GO:0012505||IEA go_process biological_process|GO:0008150||ND go_function molecular_function|GO:0003674||ND protein_id AT1G01725.1p transcript_id AT1G01725.1 At1g01730 chr1:000271002 0 W/271002-271289,271379-271433,271541-271872 gene_syn T1N6.14, T1N6_14 product unknown protein go_component chloroplast|GO:0009507||IEA go_process biological_process|GO:0008150||ND go_function molecular_function|GO:0003674||ND note similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD28388.1) protein_id AT1G01730.1p transcript_id AT1G01730.1 At1g01740 chr1:000272111 0 C/272111-272362,272445-272555,272651-272983,273064-273149,273234-273339,273429-273562,273653-273788,273863-274083,274167-274239 gene_syn T1N6.15, T1N6_15 product protein kinase family protein go_process protein amino acid phosphorylation|GO:0006468||IEA go_process N-terminal protein myristoylation|GO:0006499|12912986|IEA go_function kinase activity|GO:0016301||RCA note similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G00710.1); similar to Protein kinase [Medicago truncatula] (GB:ABE82930.1); similar to Protein kinase [Medicago truncatula] (GB:ABE92129.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) protein_id AT1G01740.1p transcript_id AT1G01740.1 At1g01750 chr1:000275528 0 W/275528-275530,275632-275897,275973-276126 gene_syn T1N6.16, T1N6_16 product actin-depolymerizing factor, putative go_component intracellular|GO:0005622||RCA go_process biological_process|GO:0008150||ND go_function actin binding|GO:0003779||IEA note Identical to Actin-depolymerizing factor-like At1g01750 (ADF-like) [Arabidopsis Thaliana] (GB:Q9LQ81); similar to actin-depolymerizing factor, putative [Arabidopsis thaliana] (TAIR:AT4G00680.1); similar to Actin-depolymerizing factor (ADF) (GB:P30175); similar to Os02g0663800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047657.1); contains InterPro domain Actin-binding, cofilin/tropomyosin type; (InterPro:IPR002108) protein_id AT1G01750.1p transcript_id AT1G01750.1 At1g01760 chr1:000276866 0 C/276866-276989,277077-277153,277232-277401,277493-277606,277717-277863,277947-278252,278316-278448 gene_syn T1N6.17, T1N6_17 product RNA binding / adenosine deaminase go_component cellular_component|GO:0005575||ND go_process RNA processing|GO:0006396||RCA go_function RNA binding|GO:0003723||RCA go_function adenosine deaminase activity|GO:0004000||RCA note similar to OSJNBa0032F06.25 [Oryza sativa (japonica cultivar-group)] (GB:CAE03442.2); similar to H0306F12.5 [Oryza sativa (indica cultivar-group)] (GB:CAJ86175.1); contains InterPro domain Adenosine deaminase/editase; (InterPro:IPR002466) protein_id AT1G01760.1p transcript_id AT1G01760.1 At1g01770 chr1:000278759 0 W/278759-278809,278887-279088,279166-279240,279327-279425,279536-279576,279797-279910,279974-280088,280180-280370,280449-280568,280657-280737,280889-281121,281309-281348,281438-281536,281759-282189,282484-282490 gene_syn T1N6.18, T1N6_18 product unknown protein go_component cellular_component|GO:0005575||ND go_process biological_process|GO:0008150||ND note similar to Protein of unknown function DUF1446 [Rhodospirillum rubrum ATCC 11170] (GB:YP_426562.1); similar to Os07g0457300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059563.1); contains InterPro domain Protein of unknown function DUF1446; (InterPro:IPR010839) protein_id AT1G01770.1p transcript_id AT1G01770.1 At1g01780 chr1:000282919 0 W/282919-283053,283132-283231,283314-283336,283444-283533,283813-284082 gene_syn T1N6.19, T1N6_19 product LIM domain-containing protein go_component cellular_component|GO:0005575||ND go_process biological_process|GO:0008150||ND go_function zinc ion binding|GO:0008270||IEA note similar to LIM domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G45800.1); similar to LIM domain protein PLIM2a [Populus tremula x Populus alba] (GB:ABK58466.1); contains InterPro domain LIM, zinc-binding; (InterPro:IPR001781) protein_id AT1G01780.1p transcript_id AT1G01780.1 At1g01790 chr1:000286606 0 W/286606-286623,286717-286807,286997-287133,287221-287280,287395-287514,287642-287710,287789-287854,288087-288176,288401-288505,288593-288721,288882-289091,289237-289386,289539-289592,289718-289776,290028-290094,290170-290346,290439-290495,290578-290652,290747-290869 gene_syn ATKEA1, K EFFLUX ANTIPORTER 1, T1N6.21, T1N6_21 gene KEA1 function K efflux antiporter KEA1 product KEA1 (K EFFLUX ANTIPORTER 1); potassium:hydrogen antiporter go_component cellular_component|GO:0005575|11500563|TAS go_process cation transport|GO:0006812||IEA go_process potassium ion transport|GO:0006813||IEA go_process regulation of pH|GO:0006885||IEA go_function potassium:hydrogen antiporter activity|GO:0015386||RCA go_function potassium ion transporter activity|GO:0015079||ISS note similar to KEA2 (K+ efflux antiporter), potassium:hydrogen antiporter [Arabidopsis thaliana] (TAIR:AT4G00630.1); similar to H0124B04.17 [Oryza sativa (indica cultivar-group)] (GB:CAJ86300.1); similar to Os04g0682800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054299.1); similar to TrkA-N [Medicago truncatula] (GB:ABD28435.1); contains InterPro domain Potassium efflux system protein; (InterPro:IPR004771); contains InterPro domain Sodium/hydrogen exchanger; (InterPro:IPR006153); contains InterPro domain TrkA-N; (InterPro:IPR003148) protein_id AT1G01790.1p transcript_id AT1G01790.1 At1g01800 chr1:000293396 0 W/293396-293409,293500-293752,294055-294120,294210-294386,294511-294888 gene_syn T1N6.22, T1N6_22 product short-chain dehydrogenase/reductase (SDR) family protein go_component cellulose and pectin-containing cell wall|GO:0009505|16287169|IDA go_process metabolic process|GO:0008152||IEA go_function oxidoreductase activity|GO:0016491||RCA note similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT3G61220.1); similar to Short-chain dehydrogenase/reductase SDR [Medicago truncatula] (GB:ABD28440.1); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) protein_id AT1G01800.1p transcript_id AT1G01800.1 At1g01800 chr1:000293595 0 W/293595-293756,294055-294120,294210-294386,294511-294888 gene_syn T1N6.22, T1N6_22 product short-chain dehydrogenase/reductase (SDR) family protein go_process metabolic process|GO:0008152||IEA note similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT3G61220.1); similar to Short-chain dehydrogenase/reductase SDR [Medicago truncatula] (GB:ABD28441.1); similar to Short-chain dehydrogenase/reductase SDR [Medicago truncatula] (GB:ABD28440.1); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) protein_id AT1G01800.2p transcript_id AT1G01800.2 At1g01810 chr1:000295242 0 W/295242-295724 gene_syn T1N6.23, T1N6_23 product unknown protein go_process biological_process|GO:0008150||ND protein_id AT1G01810.1p transcript_id AT1G01810.1 At1g01820 chr1:000296213 0 C/296213-296248,296362-296535,296626-296700,296782-296862,296951-297025,297101-297175,297532-297723 gene_syn PEX11C, T1N6.24, T1N6_24 gene PEX11C function member of the peroxin11 (PEX11) gene family, integral to peroxisome membrane, controls peroxisome proliferation. product peroxisomal biogenesis factor 11 family protein / PEX11 family protein go_component peroxisomal membrane|GO:0005778||RCA go_component integral to peroxisomal membrane|GO:0005779|17220199|IDA go_process peroxisome fission|GO:0016559|17220199|IMP go_process peroxisome fission|GO:0016559||RCA go_function molecular_function|GO:0003674||ND note similar to PEX11D [Arabidopsis thaliana] (TAIR:AT2G45740.3); similar to unknown [Lycopersicon esculentum] (GB:AAF75750.1); contains InterPro domain Peroxisomal biogenesis factor 11; (InterPro:IPR008733) protein_id AT1G01820.1p transcript_id AT1G01820.1 At1g01830 chr1:000298717 0 C/298717-300441 gene_syn T1N6.25, T1N6_25 product armadillo/beta-catenin repeat family protein go_component cellular_component|GO:0005575||ND go_function binding|GO:0005488||IEA note similar to binding [Arabidopsis thaliana] (TAIR:AT2G45720.2); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE88271.1); similar to putative arm repeat containing protein [Oryza sativa (japonica cultivar-group)] (GB:AAM92297.1); similar to Armadillo/beta-catenin-like repeat family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABB47908.1); contains InterPro domain Armadillo; (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) protein_id AT1G01830.1p transcript_id AT1G01830.1 At1g01830 chr1:000298717 0 C/298717-300441 gene_syn T1N6.25, T1N6_25 product binding go_function binding|GO:0005488||IEA note similar to binding [Arabidopsis thaliana] (TAIR:AT2G45720.2); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE88271.1); similar to putative arm repeat containing protein [Oryza sativa (japonica cultivar-group)] (GB:AAM92297.1); similar to Armadillo/beta-catenin-like repeat family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABB47908.1); contains InterPro domain Armadillo; (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) protein_id AT1G01830.2p transcript_id AT1G01830.2 At1g01830 chr1:000298717 0 C/298717-300441 gene_syn T1N6.25, T1N6_25 product binding go_function binding|GO:0005488||IEA note similar to binding [Arabidopsis thaliana] (TAIR:AT2G45720.2); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE88271.1); similar to putative arm repeat containing protein [Oryza sativa (japonica cultivar-group)] (GB:AAM92297.1); similar to Armadillo/beta-catenin-like repeat family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABB47908.1); contains InterPro domain Armadillo; (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) protein_id AT1G01830.3p transcript_id AT1G01830.3 At1g01840 chr1:000303650 0 W/303650-304108 gene_syn T1N6.26, T1N6_26 product unknown protein go_process biological_process|GO:0008150||ND go_function molecular_function|GO:0003674||ND protein_id AT1G01840.1p transcript_id AT1G01840.1 At1g01860 chr1:000304439 0 C/304439-304504,304697-304807,304880-304963,305038-305090,305174-305258,305347-305442,305547-305702,305785-305934,306045-306275 gene_syn DIMETHYLADENOSINE TRANSFERASE, PALEFACE 1 gene PFC1 function dimethyladenosine transferase product PFC1 (PALEFACE 1) go_component chloroplast|GO:0009507||IEA go_process response to cold|GO:0009409|9596631|IMP go_function mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity|GO:0016422|9596631|ISS note similar to ribosomal RNA adenine dimethylase family protein [Arabidopsis thaliana] (TAIR:AT5G66360.2); similar to Ribosomal RNA adenine dimethylase (ISS) [Ostreococcus tauri] (GB:CAL55247.1); contains InterPro domain Ribosomal RNA adenine methylase transferase; (InterPro:IPR001737); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain RRNA 16S rRNA dimethylase; (InterPro:IPR011530) protein_id AT1G01860.1p transcript_id AT1G01860.1 At1g01870 chr1:000306384 0 W/306384-306456 gene_syn 51779.TRNA-VAL-1 product pre-tRNA go_process translational elongation|GO:0006414|8980477|TAS go_function triplet codon-amino acid adaptor activity|GO:0030533|8980477|TAS note tRNA-Val (anticodon: TAC) At1g01880 chr1:000306558 0 C/306558-306800,306893-307073,307161-307359,307441-307805,307889-308070,308148-308318,308397-308573,308797-308991 gene_syn F22M8.2, F22M8_2 product DNA repair protein, putative go_process DNA repair|GO:0006281||RCA go_function nuclease activity|GO:0004518||RCA note similar to UVH3 (ULTRAVIOLET HYPERSENSITIVE 3, UV REPAIR DEFECTIVE 1), nuclease [Arabidopsis thaliana] (TAIR:AT3G28030.1); similar to putative single-strand DNA endonuclease-1 [Oryza sativa (japonica cultivar-group)] (GB:BAD46702.1); contains InterPro domain XPG I; (InterPro:IPR006086); contains InterPro domain DNA repair protein (XPGC)/yeast Rad; (InterPro:IPR006084); contains InterPro domain 5'3'-Exonuclease N- and I-domain; (InterPro:IPR000513); contains InterPro domain XPG N-terminal; (InterPro:IPR006085); contains InterPro domain Helix-hairpin-helix motif, class 2; (InterPro:IPR008918) protein_id AT1G01880.1p transcript_id AT1G01880.1 At1g01890 chr1:000309275 0 C/309275-309347 gene_syn 51779.TRNA-LYS-1 product pre-tRNA go_process translational elongation|GO:0006414|8980477|TAS go_function triplet codon-amino acid adaptor activity|GO:0030533|8980477|TAS note tRNA-Lys (anticodon: CTT) At1g01900 chr1:000310332 0 W/310332-310981,311337-313011 gene_syn F22M8.3, F22M8_3 product subtilase family protein go_component endomembrane system|GO:0012505||IEA go_process proteolysis|GO:0006508||RCA go_function subtilase activity|GO:0004289||RCA note similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT5G51750.1); similar to ARA12, subtilase [Arabidopsis thaliana] (TAIR:AT5G67360.1); similar to Orn/DAP/Arg decarboxylase 2; Protease-associated PA; Proteinase inhibitor I9, subtilisin propeptide [Medicago truncatula] (GB:ABE87035.1); similar to OSIGBa0147H17.8 [Oryza sativa (indica cultivar-group)] (GB:CAH66960.1); contains InterPro domain Protease-associated PA; (InterPro:IPR003137); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; (InterPro:IPR000209); contains InterPro domain Proteinase inhibitor I9, subtilisin propeptide; (InterPro:IPR010259); contains InterPro domain Proteinase inhibitor, propeptide; (InterPro:IPR009020) protein_id AT1G01900.1p transcript_id AT1G01900.1 At1g01910 chr1:000313595 0 C/313595-313759,313880-313995,314087-314225,314441-314551,314652-314802,314891-315015,315577-315831 gene_syn F22M8.4, F22M8_4 product anion-transporting ATPase, putative go_component membrane|GO:0016020||RCA go_process anion transport|GO:0006820||RCA go_function ATP binding|GO:0005524||RCA note similar to anion-transporting ATPase family protein [Arabidopsis thaliana] (TAIR:AT5G60730.1); similar to arsenical pump-driving atpase [Aedes aegypti] (GB:EAT35519.1); similar to Os09g0521500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063707.1); contains InterPro domain Anion-transporting ATPase; (InterPro:IPR003348) protein_id AT1G01910.1p transcript_id AT1G01910.1 At1g01910 chr1:000313595 0 C/313595-313759,313880-313995,314087-314225,314441-314551,314652-314802,314891-315015,315577-315831 gene_syn F22M8.4, F22M8_4 product anion-transporting ATPase, putative go_component membrane|GO:0016020||RCA go_process anion transport|GO:0006820||RCA go_function ATP binding|GO:0005524||RCA note similar to anion-transporting ATPase family protein [Arabidopsis thaliana] (TAIR:AT5G60730.1); similar to arsenical pump-driving atpase [Aedes aegypti] (GB:EAT35519.1); similar to Os09g0521500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063707.1); contains InterPro domain Anion-transporting ATPase; (InterPro:IPR003348) protein_id AT1G01910.2p transcript_id AT1G01910.2 At1g01910 chr1:000313595 0 C/313595-313759,313880-313995,314087-314225,314441-314551,314652-314802,314891-315015,315577-315831 gene_syn F22M8.4, F22M8_4 product anion-transporting ATPase, putative note similar to anion-transporting ATPase family protein [Arabidopsis thaliana] (TAIR:AT5G60730.1); similar to arsenical pump-driving atpase [Aedes aegypti] (GB:EAT35519.1); similar to Os09g0521500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063707.1); contains InterPro domain Anion-transporting ATPase; (InterPro:IPR003348) protein_id AT1G01910.4p transcript_id AT1G01910.4 At1g01910 chr1:000313746 0 C/313746-313752,313872-313995,314087-314225,314441-314551,314652-314802,314891-315015,315577-315831 gene_syn F22M8.4, F22M8_4 product ATP binding go_component membrane|GO:0016020||RCA go_process anion transport|GO:0006820||RCA go_function ATP binding|GO:0005524||RCA note similar to anion-transporting ATPase family protein [Arabidopsis thaliana] (TAIR:AT5G60730.1); similar to PREDICTED: similar to CG1598-PA [Tribolium castaneum] (GB:XP_974589.1); similar to Os09g0521500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063707.1); contains InterPro domain Anion-transporting ATPase; (InterPro:IPR003348) protein_id AT1G01910.3p transcript_id AT1G01910.3 At1g01920 chr1:000316204 0 W/316204-316257,316344-316440,316539-316713,316792-316897,317008-317090,317167-317193,317294-317439,317553-317642,317765-317845,317979-318040,318145-318201,318362-318433,318565-318813,318986-319101,319204-319296,319372-319507 gene_syn F22M8.5, F22M8_5 product SET domain-containing protein go_component nucleus|GO:0005634||IEA go_process biological_process|GO:0008150||ND go_function molecular_function|GO:0003674||ND note similar to ribulose-1,5 bisphosphate carboxylase oxygenase large subunit N-methyltransferase, putative [Arabidopsis thaliana] (TAIR:AT1G14030.1); similar to Nuclear protein SET [Medicago truncatula] (GB:ABD28449.1); contains InterPro domain Nuclear protein SET; (InterPro:IPR001214) protein_id AT1G01920.2p transcript_id AT1G01920.2 At1g01920 chr1:000316204 0 W/316204-316257,316344-316440,316539-316713,316792-316897,317008-317090,317167-317193,317294-317456,317561-317642,317765-317845,317979-318040,318145-318201,318296-318433,318565-318813,318986-319101,319204-319296,319372-319507 gene_syn F22M8.5, F22M8_5 product SET domain-containing protein go_component nucleus|GO:0005634||IEA go_process biological_process|GO:0008150||ND go_function molecular_function|GO:0003674||ND note similar to ribulose-1,5 bisphosphate carboxylase oxygenase large subunit N-methyltransferase, putative [Arabidopsis thaliana] (TAIR:AT1G14030.1); similar to Nuclear protein SET [Medicago truncatula] (GB:ABD28449.1); contains InterPro domain Nuclear protein SET; (InterPro:IPR001214) protein_id AT1G01920.1p transcript_id AT1G01920.1 At1g01930 chr1:000320041 0 C/320041-320145,320252-320296,320380-320457,320769-321422,321751-321865,321958-322406,322513-322809 gene_syn F22M8.6, F22M8_6 product zinc finger protein-related go_process biological_process|GO:0008150||ND note similar to unnamed protein product [Tetraodon nigroviridis] (GB:CAG09306.1); similar to Os04g0574600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053619.1); similar to OSJNBa0019K04.19 [Oryza sativa (japonica cultivar-group)] (GB:CAD41672.1); contains InterPro domain Ankyrin; (InterPro:IPR002110) protein_id AT1G01930.1p transcript_id AT1G01930.1 At1g01940 chr1:000323082 0 W/323082-323084,323208-323282,323679-323840,324258-324416,324636-324719 gene_syn F22M8.7, F22M8_7 product peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein go_component cellular_component|GO:0005575||ND go_process protein folding|GO:0006457||RCA go_function peptidyl-prolyl cis-trans isomerase activity|GO:0003755||RCA note similar to peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein [Arabidopsis thaliana] (TAIR:AT5G67530.1); similar to Peptidyl-prolyl cis-trans isomerase-like 3 (PPIase) (Rotamase) (GB:Q5KHA8); similar to Os06g0130500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056690.1); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, cyclophilin type; (InterPro:IPR002130) protein_id AT1G01940.1p transcript_id AT1G01940.1 At1g01950 chr1:000325473 0 W/325473-325641,325913-326013,326106-326228,326332-326517,326594-326815,326931-327084,327237-327386,327488-327576,327663-327866,328000-328107,328188-328322,328424-328555,328898-329030,329119-329211,329311-329436,329573-329698,329781-329924,330027-330155,330243-330403 gene_syn F22M8.8, F22M8_8 product armadillo/beta-catenin repeat family protein / kinesin motor family protein go_component microtubule associated complex|GO:0005875||IEA go_component chloroplast|GO:0009507||IEA go_process microtubule-based movement|GO:0007018||IEA go_function microtubule motor activity|GO:0003777||RCA note similar to PAK (PHOSPHATIDIC ACID KINASE), microtubule motor [Arabidopsis thaliana] (TAIR:AT1G12430.1); similar to Os06g0137100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056731.1); similar to Os03g0152900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048996.1); similar to Kinesin motor domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94031.1); contains InterPro domain Armadillo; (InterPro:IPR000225); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) protein_id AT1G01950.1p transcript_id AT1G01950.1 At1g01960 chr1:000330830 0 C/330830-331423,331534-332183,332276-332633,332724-333045,333129-333628,333905-334178,334471-334763,334899-335321,335419-335773,335916-336233,336417-337582 gene_syn EDA10, F22M8.9, F22M8_9, embryo sac development arrest 10 gene EDA10 product EDA10 (embryo sac development arrest 10); guanyl-nucleotide exchange factor go_component intracellular|GO:0005622||IEA go_process megagametophyte nuclear division|GO:0009561|15634699|IMP go_function guanyl-nucleotide exchange factor activity|GO:0005085||RCA note similar to guanine nucleotide exchange family protein [Arabidopsis thaliana] (TAIR:AT3G60860.1); similar to guanine nucleotide exchange family protein [Arabidopsis thaliana] (TAIR:AT4G35380.1); similar to guanine nucleotide exchange family protein [Arabidopsis thaliana] (TAIR:AT4G38200.1); similar to putative guanine nucleotide-exchange protein GEP2 [Oryza sativa (japonica cultivar-group)] (GB:BAD35378.1); similar to putative guanine nucleotide-exchange protein GEP2 [Oryza sativa (japonica cultivar-group)] (GB:BAD15400.1); similar to guanine nucleotide-exchange protein GEP2 [Oryza sativa] (GB:AAM00191.1); contains InterPro domain SEC7-like; (InterPro:IPR000904) protein_id AT1G01960.1p transcript_id AT1G01960.1 At1g01970 chr1:000338538 0 W/338538-338987,339126-339905 gene_syn F22M8.10, F22M8_10 product pentatricopeptide (PPR) repeat-containing protein go_process biological_process|GO:0008150||ND go_function molecular_function|GO:0003674||ND note similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G19525.1); similar to pentatricopeptide repeat protein [Physcomitrella patens] (GB:BAF34329.1); similar to Os07g0661900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060542.1); similar to Os02g0611400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047406.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940) protein_id AT1G01970.1p transcript_id AT1G01970.1 At1g01980 chr1:000340374 0 C/340374-341999 gene_syn F22M8.11, F22M8_11, SEC1A gene ATSEC1A function member of Reticuline oxidase-like family product ATSEC1A; electron carrier go_component endomembrane system|GO:0012505||IEA go_process electron transport|GO:0006118||IEA go_function electron carrier activity|GO:0009055||RCA note similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G11770.1); similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G20840.1); similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G20830.2); similar to Berberine and berberine like, putative [Medicago truncatula] (GB:ABE90038.1); contains InterPro domain FAD linked oxidase, N-terminal; (InterPro:IPR006094); contains InterPro domain Berberine/berberine-like; (InterPro:IPR012951) protein_id AT1G01980.1p transcript_id AT1G01980.1 At1g01990 chr1:000343462 0 C/343462-344199 gene_syn F22M8.12, F22M8_12 product unknown protein go_process biological_process|GO:0008150||ND go_function molecular_function|GO:0003674||ND note similar to chloroplast lumen common family protein [Arabidopsis thaliana] (TAIR:AT5G02590.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE79208.1) protein_id AT1G01990.1p transcript_id AT1G01990.1 At1g02000 chr1:000346052 0 W/346052-347356 gene_syn F22M8.13, F22M8_13, UDP-D-GLUCURONATE 4-EPIMERASE 2 gene GAE2 function UDP-D-glucuronate 4-epimerase product GAE2 (UDP-D-GLUCURONATE 4-EPIMERASE 2); catalytic go_component cellular_component|GO:0005575||ND go_process nucleotide-sugar metabolic process|GO:0009225||RCA go_function catalytic activity|GO:0003824||RCA go_function UDP-glucuronate 4-epimerase activity|GO:0050378|15247385|ISS note similar to GAE3 (UDP-D-GLUCURONATE 4-EPIMERASE 3), catalytic [Arabidopsis thaliana] (TAIR:AT4G00110.1); similar to GAE5 (UDP-D-GLUCURONATE 4-EPIMERASE 5), catalytic [Arabidopsis thaliana] (TAIR:AT4G12250.1); similar to GAE4 (UDP-D-GLUCURONATE 4-EPIMERASE 4), catalytic [Arabidopsis thaliana] (TAIR:AT2G45310.1); similar to NAD-dependent epimerase/dehydratase; TonB box, N-terminal [Medicago truncatula] (GB:ABE85249.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain Nucleotide sugar epimerase; (InterPro:IPR008089) protein_id AT1G02000.1p transcript_id AT1G02000.1 At1g02010 chr1:000348046 0 W/348046-348127,348212-348267,348373-348454,348562-348640,348735-348785,348880-348976,349067-349099,349238-349366,349550-349720,349803-349886,350049-350147,350226-350296,350474-350570,350658-350783,350871-350966,351044-351160,351252-351329,351412-351632,351729-351819,351912-352001,352126-352197 gene SEC1A function member of KEULE Gene Family product SEC1A; protein transporter go_component cellular_component|GO:0005575||ND go_process protein secretion|GO:0009306||RCA go_function protein transporter activity|GO:0008565||RCA note similar to SEC1B, protein transporter [Arabidopsis thaliana] (TAIR:AT4G12120.1); similar to KEU (KEULE), protein transporter [Arabidopsis thaliana] (TAIR:AT1G12360.1); similar to Sec1-like protein [Medicago truncatula] (GB:ABE87444.1); similar to Sec1-like protein [Medicago truncatula] (GB:ABE92383.1); similar to Protein transport Sec1a (AtSec1a) (GB:Q9C5P7); contains InterPro domain Sec1-like protein; (InterPro:IPR001619) protein_id AT1G02010.1p transcript_id AT1G02010.1 At1g02020 chr1:000352842 0 C/352842-353162,353238-354845 gene_syn T7I23.2, T7I23_2 product nitroreductase family protein go_process metabolic process|GO:0008152||RCA go_function oxidoreductase activity, acting on NADH or NADPH, nitrogenous group as acceptor|GO:0016657||RCA note similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAM93466.1); contains domain no description (G3D.3.40.109.10); contains domain NADH oxidase/flavin reductase (SSF55469) protein_id AT1G02020.1p transcript_id AT1G02020.1 At1g02020 chr1:000353214 0 C/353214-354845 gene_syn T7I23.2, T7I23_2 product nitroreductase family protein go_process metabolic process|GO:0008152||RCA go_function oxidoreductase activity, acting on NADH or NADPH, nitrogenous group as acceptor|GO:0016657||RCA note similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAM93466.1); contains domain no description (G3D.3.40.109.10); contains domain NADH oxidase/flavin reductase (SSF55469) protein_id AT1G02020.2p transcript_id AT1G02020.2 At1g02030 chr1:000355385 0 C/355385-356188 gene_syn T7I23.3, T7I23_3 product zinc finger (C2H2 type) family protein go_component intracellular|GO:0005622||IEA go_process regulation of transcription|GO:0045449|11118137|TAS go_function nucleic acid binding|GO:0003676||RCA go_function transcription factor activity|GO:0003700|11118137|ISS go_function zinc ion binding|GO:0008270||RCA note similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT3G60580.1); similar to Cys2/His2 zinc-finger transcription factor [Silene latifolia] (GB:AAY40249.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) protein_id AT1G02030.1p transcript_id AT1G02030.1 At1g02040 chr1:000358104 0 C/358104-359078 gene_syn T7I23.24, T7I23_24 product zinc finger (C2H2 type) family protein go_component intracellular|GO:0005622||IEA go_function nucleic acid binding|GO:0003676||RCA go_function transcription factor activity|GO:0003700|11118137|ISS go_function zinc ion binding|GO:0008270||RCA note similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT2G17180.1); similar to PEThy;ZPT3-1 [Petunia x hybrida] (GB:BAA19112.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) protein_id AT1G02040.1p transcript_id AT1G02040.1 At1g02050 chr1:000359164 0 C/359164-360149,360240-360441 gene_syn T7I23.4, T7I23_4 product chalcone and stilbene synthase family protein go_process phenylpropanoid biosynthetic process|GO:0009699||RCA go_function acyltransferase activity|GO:0008415||IEA go_function transferase activity, transferring groups other than amino-acyl groups|GO:0016747||IEA note similar to chalcone and stilbene synthase family protein [Arabidopsis thaliana] (TAIR:AT4G00040.1); similar to Type III polyketide synthase [Medicago truncatula] (GB:ABE89004.1); contains InterPro domain Chalcone and stilbene synthases, N-terminal; (InterPro:IPR001099); contains InterPro domain Type III polyketide synthase; (InterPro:IPR011141); contains InterPro domain Chalcone and stilbene synthases, C-terminal; (InterPro:IPR012328) protein_id AT1G02050.1p transcript_id AT1G02050.1 At1g02060 chr1:000360918 0 C/360918-363050 gene_syn T7I23.14, T7I23_14 product pentatricopeptide (PPR) repeat-containing protein go_component chloroplast|GO:0009507||IEA go_process biological_process|GO:0008150||ND go_function binding|GO:0005488||IEA note similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT2G37230.1); similar to Os02g0110400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045649.1); similar to Os02g0121900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045722.1); similar to Pentatricopeptide repeat [Medicago truncatula] (GB:ABE84479.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) protein_id AT1G02060.1p transcript_id AT1G02060.1 At1g02065 chr1:000365625 0 W/365625-366325,366723-366859,366986-367149 gene_syn SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8 gene SPL8 function Encodes an SBP-box gene, a member of the SPL gene family. Mutants are affected in micro- and megasporogenesis, trichome formation on sepals, and stamen filament elongation. product SPL8 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8); DNA binding go_component nucleus|GO:0005634||RCA go_function DNA binding|GO:0003677||RCA go_component nucleus|GO:0005634|12671094|ISS go_process megasporogenesis|GO:0009554|12671094|IMP go_process microsporogenesis|GO:0009556|12671094|IMP go_function DNA binding|GO:0003677|12671094|ISS note Identical to Squamosa promoter-binding-like protein 8 (SPL8) [Arabidopsis Thaliana] (GB:Q8GXL3;GB:Q9S849); similar to squamosa promoter-binding protein-like 6 (SPL6) [Arabidopsis thaliana] (TAIR:AT1G69170.1); similar to squamosa promoter binding protein-homologue 3 [Antirrhinum majus] (GB:CAB56568.1); contains InterPro domain SBP; (InterPro:IPR004333) protein_id AT1G02065.1p transcript_id AT1G02065.1 At1g02065 chr1:000365625 0 W/365625-366365 gene_syn SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8 gene SPL8 function Encodes an SBP-box gene, a member of the SPL gene family. Mutants are affected in micro- and megasporogenesis, trichome formation on sepals, and stamen filament elongation. product SPL8 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8); DNA binding go_component nucleus|GO:0005634||RCA go_function DNA binding|GO:0003677||RCA go_component nucleus|GO:0005634|12671094|ISS go_process megasporogenesis|GO:0009554|12671094|IMP go_process microsporogenesis|GO:0009556|12671094|IMP go_function DNA binding|GO:0003677|12671094|ISS note Identical to Squamosa promoter-binding-like protein 8 (SPL8) [Arabidopsis Thaliana] (GB:Q8GXL3;GB:Q9S849); similar to squamosa promoter-binding protein-like 9 (SPL9) [Arabidopsis thaliana] (TAIR:AT2G42200.1); similar to squamosa promoter binding protein-homologue 3 [Antirrhinum majus] (GB:CAB56568.1); contains InterPro domain SBP; (InterPro:IPR004333) protein_id AT1G02065.2p transcript_id AT1G02065.2 At1g02070 chr1:000370445 0 C/370445-370751,370859-370947 gene_syn T7I23.30, T7I23_30 product unknown protein go_component cellular_component|GO:0005575||ND note similar to zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G60520.1); similar to Os04g0551600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053498.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD25766.1); similar to Os02g0658200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047633.1) protein_id AT1G02070.1p transcript_id AT1G02070.1 At1g02080 chr1:000373694 0 W/373694-373786,373892-374189,374272-374500,374583-374922,375122-375238,375325-375453,375528-375719,375808-376002,376114-376251,376352-376474,376562-376815,376925-377028,377211-377305,377391-377615,377881-378036,378119-378191,378298-378365,378504-378649,378746-378854,378943-379089,379183-379230,379305-379433,379528-379770,379866-380003,380089-380174,380270-380375,380602-380697,380846-380998,381150-381332,381405-381634,381730-381832,381912-382040,382127-382171,382373-382567,382803-382929,383030-383130,383395-383529,383608-383688,384084-384230,384318-384449,384558-384605,384694-384840,384908-384969,385171-385324,385432-385623,385713-385817,385909-386043,386133-386333,386428-386682 gene_syn T7I23.15, T7I23_15 product transcriptional regulator-related go_function transcription regulator activity|GO:0030528||RCA note similar to transcriptional regulator, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:AAP54975.2); similar to CCR4-Not complex component, Not1 [Medicago truncatula] (GB:ABE86980.1); similar to putative transcription regulatory protein [Oryza sativa (japonica cultivar-group)] (GB:AAK55455.1); contains InterPro domain CCR4-Not complex component, Not1; (InterPro:IPR007196) protein_id AT1G02080.1p transcript_id AT1G02080.1 At1g02090 chr1:000387479 0 C/387479-387503,387584-387672,388268-388406,388539-388609,388716-388760,388851-388940,389050-389138,389226-389301,389410-389568 gene_syn CONSTITUTIVE PHOTOMORPHOGENIC 15, CSN7, CSN7II, FUS5, FUSCA 5, T7I23.25, T7I23_25 gene FUS5 function encodes a phosphoprotein that is a subunit of the COP9 signalosome. Mutants exhibit constitutive photomorphogenic phenotype. product FUS5 (FUSCA 5); MAP kinase kinase go_component nucleus|GO:0005634|10330469|ISS go_component signalosome complex|GO:0008180|11019806|TAS go_process photomorphogenesis|GO:0009640|11019806|TAS go_function MAP kinase kinase activity|GO:0004708|10330469|ISS go_component signalosome complex|GO:0008180|9707402|IPI note Identical to COP9 signalosome complex subunit 7 (CSN complex subunit 7) (FUSCA protein 5) (FUSCA5) (CSN7) [Arabidopsis Thaliana] (GB:Q94JU3;GB:O81247); similar to putative COP9 complex subunit, FUS5 [Oryza sativa (japonica cultivar-group)] (GB:BAD30468.1); contains InterPro domain Proteasome component region PCI; (InterPro:IPR000717) protein_id AT1G02090.1p transcript_id AT1G02090.1 At1g02090 chr1:000387647 0 C/387647-387655,388268-388406,388539-388609,388716-388760,388851-388940,389050-389138,389226-389301,389410-389568 gene_syn CONSTITUTIVE PHOTOMORPHOGENIC 15, CSN7, CSN7II, FUS5, FUSCA 5, T7I23.25, T7I23_25 gene FUS5 function encodes a phosphoprotein that is a subunit of the COP9 signalosome. Mutants exhibit constitutive photomorphogenic phenotype. product FUS5 (FUSCA 5); MAP kinase kinase go_component nucleus|GO:0005634|10330469|ISS go_component signalosome complex|GO:0008180|11019806|TAS go_process photomorphogenesis|GO:0009640|11019806|TAS go_function MAP kinase kinase activity|GO:0004708|10330469|ISS go_component signalosome complex|GO:0008180|9707402|IPI note Identical to COP9 signalosome complex subunit 7 (CSN complex subunit 7) (FUSCA protein 5) (FUSCA5) (CSN7) [Arabidopsis Thaliana] (GB:Q94JU3;GB:O81247); similar to putative COP9 complex subunit, FUS5 [Oryza sativa (japonica cultivar-group)] (GB:BAD30468.1); contains InterPro domain Proteasome component region PCI; (InterPro:IPR000717) protein_id AT1G0209