At1g01010 chr1:000003760 0.0 W/3760-3913,3996-4276,4486-4605,4706-5095,5174-5326,5439-5630 no apical meristem (NAM) family protein similar to NAC domain protein NAM GB: AAD17313 GI:4325282 from [Arabidopsis thaliana]; go_function: transcription factor activity [goid 0003700]; go_process: development [goid 0007275] At1g01020 chr1:000007729 0.0 C/7729-7835,7942-7987,8236-8325,8417-8464,8571-8666 transmembrane ARV1-like family protein At1g01030 chr1:000011864 0.0 C/11864-12940 DNA-binding protein, putative contains Pfam profile PF02362: B3 DNA binding domain; go_function: transcription factor activity [goid 0003700] At1g01040 chr1:000023519 0.0 W/23519-24451,24542-24655,24752-24962,25041-25435,25524-25743,25825-25997,26081-26203,26292-26452,26543-26776,26862-27012,27099-27281,27372-27533,27618-27713,27803-28431,28708-28805,28890-29080,29160-30065,30147-30311,30410-30816,30902-31079 DEAD/DEAH box helicase carpel factory / CAF go_function: RNA helicase activity [goid 0003724]; go_function: ribonuclease III activity [goid 0004525]; go_function: ATP dependent helicase activity [goid 0008026]; go_process: cytokinesis [goid 0000910]; go_process: RNA processing [goid 0006396]; go_process: embryonic pattern specification [goid 0009880]; go_process: suspensor development [goid 0010098] At1g01050 chr1:000031382 0.0 C/31382-31424,31521-31602,31693-31813,31933-31998,32088-32195,32282-32347,32431-32459,32547-32670 inorganic pyrophosphatase, putative [soluble] / pyrophosphate phospho-hydrolase, putative / PPase, putative inorganic pyrophosphatase, putative [soluble] /pyrophosphate phospho-hydrolase, putative / PPase, contains Pfam profile PF00719: inorganic pyrophosphatase; go_component: membrane [goid 0016020]; go_function: pyrophosphatase activity [goid 0016462]; go_process: metabolism [goid 0008152] At1g01060 chr1:000033992 0.0 C/33992-34327,34401-35474,35567-35647,35730-35963,36624-36685,36810-36921,37023-37061 myb family transcription factor identical to cDNA LATE ELONGATED HYPOCOTYL MYB transcription factor GI:3281845; go_function: DNA binding [goid 0003677]; go_function: transcription factor activity [goid 0003700] At1g01070 chr1:000038898 0.0 C/38898-39054,39136-39287,39409-39814,40213-40329,40473-40535,40675-40877 nodulin MtN21 family protein At1g01070 chr1:000038898 0.0 C/38898-39054,39136-39287,39409-39814,40213-40329,40473-40597 nodulin MtN21 family protein At1g01080 chr1:000045503 0.0 C/45503-45559,45646-45954,46044-46145,46376-46789 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative 33 kDa ribonucleoprotein, chloroplast, putative/ RNA-binding protein cp33, putative go_function: RNA binding [goid 0003723] At1g01090 chr1:000047705 0.0 C/47705-47982,48075-48852,48936-49166 pyruvate dehydrogenase E1 component alpha subunit, chloroplast pyruvate dehydrogenase E1 component alphasubunit, chloroplast identical to cDNA pyruvate dehydrogenase E1 alpha subunit mRNA, nuclear gene encoding plastid protein GI:2454181; go_function: pyruvate dehydrogenase (acetyl-transferring) activity [goid 0004739]; go_process: metabolism [goid 0008152] At1g01100 chr1:000050284 0.0 C/50284-50337,50419-50631,50883-50954 60S acidic ribosomal protein P1 (RPP1A) go_component: ribosome [goid 0005840]; go_function: structural constituent of ribosome [goid 0003735]; go_process: translational elongation [goid 0006414] At1g01110 chr1:000053022 0.0 W/53022-53183,53484-53624,53703-54494 expressed protein At1g01120 chr1:000057392 0.0 C/57392-58978 fatty acid elongase 3-ketoacyl-CoA synthase 1 (KCS1) go_function: acyltransferase activity [goid 0008415]; go_function: fatty acid elongase activity [goid 0009922]; go_process: very-long-chain fatty acid metabolism [goid 0000038]; go_process: wax biosynthesis [goid 0010025]; go_process: fatty acid elongation [goid 0030497]; go_process: cuticle biosynthesis [goid 0042335] At1g01130 chr1:000061963 0.0 C/61963-62124,63431-63811 expressed protein At1g01140 chr1:000064398 0.0 C/64398-64475,64570-64656,64751-64807,64901-65017,65110-65217,65331-65456,65563-65652,65739-65864,66107-66160,66262-66342,66450-66557,66678-66749,66835-66897,67324-67512 CBL-interacting protein kinase 9 (CIPK9) contains Pfam profiles PF00069: Protein kinase domain and PF03822: NAF domain; identical to cDNA CBL-interacting protein kinase 9 (CIPK9) GI:13249116; go_function: kinase activity [goid 0016301] At1g01140 chr1:000064398 0.0 C/64398-64475,64582-64656,64751-64807,64901-65017,65110-65217,65331-65456,65563-65652,65733-65864,66107-66160,66262-66342,66450-66557,66678-66749,66835-66897,67324-67512 CBL-interacting protein kinase 9 (CIPK9) contains Pfam profiles PF00069: Protein kinase domain and PF03822: NAF domain; identical to cDNA CBL-interacting protein kinase 9 (CIPK9) GI:13249116; go_function: kinase activity [goid 0016301] At1g01140 chr1:000064398 0.0 C/64398-64475,64582-64656,64751-64807,64901-65017,65110-65217,65331-65456,65563-65652,65739-65864,66107-66160,66262-66342,66450-66557,66678-66749,66835-66897,67324-67512 CBL-interacting protein kinase 9 (CIPK9) contains Pfam profiles PF00069: Protein kinase domain and PF03822: NAF domain; identical to cDNA CBL-interacting protein kinase 9 (CIPK9) GI:13249116; go_function: kinase activity [goid 0016301] At1g01150 chr1:000070115 0.0 C/70115-70285,70840-70968,71041-71721,71942-71998 expressed protein At1g01160 chr1:000072583 0.0 W/72583-72669,73087-73163,73287-73395,73488-73740,73822-73883 SSXT protein-related / transcription co-activator-related SSXT protein-related / transcriptionco-activator-related supporting cDNA gi|21539891|gb|AY102640.1|; contains Pfam profile PF05030: SSXT protein (N-terminal region) At1g01170 chr1:000074105 0.0 C/74105-74250,74338-74443 ozone-responsive stress-related protein, putative ozone-responsive stress-related protein,putative contains 1 predicted transmembrane domain; go_process: response to stress [goid 0006950] At1g01180 chr1:000075633 0.0 W/75633-76547,76814-76951,77031-77280,77313-77446 expressed protein At1g01190 chr1:000083045 0.0 C/83045-83671,83884-84864 cytochrome P450, putative At1g01200 chr1:000086715 0.0 C/86715-87162,87880-88145 Ras-related GTP-binding protein, putative go_function: GTP binding [goid 0005525] At1g01210 chr1:000088977 0.0 W/88977-89081,89173-89263,89405-89529 DNA-directed RNA polymerase III family protein contains Pfam profiles PF02150: RNA polymerases M/15 Kd subunit, PF01096: Transcription factor S-II (TFIIS); go_component: nucleus [goid 0005634]; go_function: DNA binding [goid 0003677]; go_function: transcription factor activity [goid 0003700]; go_function: DNA-directed RNA polymerase activity [goid 0003899]; go_process: RNA elongation [goid 0006354]; go_process: regulation of transcription, DNA-dependent [goid 0006355] At1g01220 chr1:000091750 0.0 W/91750-92070,92270-92501,92569-92933,93045-93171,93271-94281,94357-95075,95160-95552 GHMP kinase-related At1g01225 chr1:000096064 0.0 W/96064-96157,96554-97242 NC domain-containing protein-related At1g01230 chr1:000097620 0.0 W/97620-97805,98457-98605,98908-99046 ORMDL family protein go_component: endoplasmic reticulum [goid 0005783]; go_process: protein folding [goid 0006457] At1g01240 chr1:000100683 0.0 W/100683-101678 expressed protein At1g01250 chr1:000104731 0.0 C/104731-105309 AP2 domain-containing transcription factor, putative go_component: nucleus [goid 0005634]; go_function: DNA binding [goid 0003677]; go_function: transcription factor activity [goid 0003700]; go_process: regulation of transcription, DNA-dependent [goid 0006355] At1g01260 chr1:000109595 0.0 W/109595-111367 basic helix-loop-helix (bHLH) family protein go_function: DNA binding [goid 0003677]; go_function: transcription factor activity [goid 0003700] At1g01270 chr1:000111890 0.0 C/111890-111961 tRNA-Gln At1g01280 chr1:000112290 0.0 W/112290-113195,113279-113905 cytochrome P450 family protein go_function: cytochrome P450 activity [goid 0015034]; go_function: oxygen binding [goid 0019825] At1g01290 chr1:000114299 0.0 W/114299-114433,114619-115296 molybdopterin biosynthesis CNX3 protein / molybdenum cofactor biosynthesis enzyme CNX3 (CNX3) molybdopterin biosynthesis CNX3 protein /molybdenum cofactor biosynthesis enzyme CNX3 (CNX3) go_function: catalytic activity [goid 0003824]; go_process: Mo-molybdopterin cofactor biosynthesis [goid 0006777] At1g01300 chr1:000117065 0.0 W/117065-118522 aspartyl protease family protein go_function: pepsin A activity [goid 0004194]; go_process: proteolysis and peptidolysis [goid 0006508] At1g01310 chr1:000120221 0.0 W/120221-120946 allergen V5/Tpx-1-related family protein contains Pfam profile PF00188: SCP-like extracellular protein; go_component: extracellular [goid 0005576] At1g01320 chr1:000121582 0.0 C/121582-123501,123579-123669,123785-123897,123992-124123,124211-124394,124499-124632,124714-124818,124921-125046,125134-125226,125329-125655,125742-125843,125936-125998,126076-126589,126686-126840,126935-127453,127532-127573,127651-127782,127868-127935,128028-128312,128479-128551,128968-129060,129853-129914,130039-130099 tetratricopeptide repeat (TPR)-containing protein tetratricopeptide repeat (TPR)-containingprotein contains Pfam profile PF00515: TPR Domain At1g01340 chr1:000132414 0.0 C/132414-132744,132824-133218,133303-133539,133641-133752,133911-134206,134289-134501,134582-135118 cyclic nucleotide-regulated ion channel (CNGC10) (ACBK1) cyclic nucleotide-regulated ion channel (CNGC10)(ACBK1) contains Pfam domain, PF00520: Ion transport protein; go_function: ion channel activity [goid 0005216]; go_function: calmodulin binding [goid 0005516]; go_function: cyclic nucleotide binding [goid 0030551] At1g01350 chr1:000136732 0.0 W/136732-136816,136935-137758,137848-137966,138522-138778,138863-139114,139203-139345,139488-139568 zinc finger (CCCH-type/C3HC4-type RING finger) family protein zinc finger (CCCH-type/C3HC4-type RING finger)family protein At1g01360 chr1:000142138 0.0 W/142138-142281,142424-142639,142711-142914 expressed protein At1g01370 chr1:000143773 0.0 W/143773-143824,143934-143977,144064-144109,144193-144227,144315-144351,144447-144559,144927-145004,145132-145207,145345-145400 centromeric histone H3 HTR12 (HTR12) contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4; go_component: chromosome, pericentric region [goid 0000775]; go_function: DNA binding [goid 0003677] At1g01380 chr1:000147267 0.0 W/147267-147333,147452-147539,147644-147740 myb family transcription factor go_function: DNA binding [goid 0003677]; go_function: transcription factor activity [goid 0003700]; go_process: regulation of transcription, DNA-dependent [goid 0006355] At1g01380 chr1:000147267 0.0 W/147267-147333,147452-147539,147644-147935 myb family transcription factor go_function: DNA binding [goid 0003677]; go_function: transcription factor activity [goid 0003700]; go_process: regulation of transcription, DNA-dependent [goid 0006355] At1g01390 chr1:000148319 0.0 C/148319-149761 UDP-glucoronosyl/UDP-glucosyl transferase family protein go_function: UDP-glycosyltransferase activity [goid 0008194]; go_function: transferase activity, transferring glycosyl groups [goid 0016757] At1g01400 chr1:000151158 0.0 C/151158-151298,151393-151731,151932-152002,152086-152149 hypothetical protein At1g01410 chr1:000153113 0.0 W/153113-154198 hypothetical protein At1g01420 chr1:000154566 0.0 C/154566-156011 UDP-glucoronosyl/UDP-glucosyl transferase family protein At1g01430 chr1:000156953 0.0 C/156953-157756,157829-158112,158254-158536 expressed protein At1g01440 chr1:000159935 0.0 C/159935-159992,160079-160302,160418-160478,160568-162219 extra-large G-protein-related At1g01450 chr1:000164105 0.0 C/164105-165517 protein kinase-related At1g01460 chr1:000169115 0.0 W/169115-169257,169347-169509,169600-169710,169806-169993,170071-170162,170266-170313,170412-170507,170622-170760,170851-171154 phosphatidylinositol-4-phosphate 5-kinase family protein phosphatidylinositol-4-phosphate 5-kinase familyprotein contains Pfam profile PF01504: Phosphatidylinositol-4-phosphate 5-Kinase; go_function: 1-phosphatidylinositol-4-phosphate 5-kinase activity [goid 0016308] At1g01470 chr1:000172295 0.0 C/172295-172544,172621-172826 late embryogenesis abundant protein, putative / LEA protein, putative late embryogenesis abundant protein, putative /LEA protein, putative contains Pfam profile PF03168: Late embryogenesis abundant protein; go_process: response to dessication [goid 0009269]; go_process: response to wounding [goid 0009611]; go_process: response to high light intensity [goid 0009644]; go_process: embryonic development (sensu Magnoliophyta) [goid 0009793] At1g01480 chr1:000176607 0.0 W/176607-176752,177025-178051 1-aminocyclopropane-1-carboxylate synthase 2 / ACC synthase 2 (ACS2) (ACC1) 1-aminocyclopropane-1-carboxylate synthase 2 /ACC synthase 2 (ACS2) (ACC1) go_function: 1-aminocyclopropane-1-carboxylate synthase activity [goid 0016847]; go_process: ethylene biosynthesis [goid 0009693] At1g01490 chr1:000180401 0.0 C/180401-180852,181347-181422,182061-182066 heavy-metal-associated domain-containing protein heavy-metal-associated domain-containingprotein go_function: metal ion binding [goid 0046872] At1g01500 chr1:000185260 0.0 W/185260-186009,186340-186573 expressed protein At1g01510 chr1:000187235 0.0 W/187235-187822,188011-188176,188284-188414,188529-189320,189417-189464,189562-189675,189765-189836 C-terminal binding protein (ANGUSTIFOLIA) contains Pfam profile PF02826: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; go_function: protein binding [goid 0005515]; go_process: microtubule cytoskeleton organization and biogenesis [goid 0000226]; go_process: leaf morphogenesis [goid 0009965]; go_process: polar cell elongation [goid 0010153] At1g01520 chr1:000190596 0.0 W/190596-190828,190941-190998,191138-191258,191341-191475,191579-191692,191780-191889,191967-192026,192107-192139 myb family transcription factor At1g01530 chr1:000192640 0.0 C/192640-193071,193351-193662 MADS-box protein (AGL28) At1g01540 chr1:000195980 0.0 W/195980-196542,197115-197219,197300-197422,197501-197671,197775-197904,197974-198183,198267-198383 protein kinase family protein contains serine/threonine protein kinase domain, INTERPRO:IPR002290; go_function: kinase activity [goid 0016301] At1g01540 chr1:000195980 0.0 W/195980-196542,197115-197219,197300-197422,197501-197671,197775-197973 protein kinase family protein contains serine/threonine protein kinase domain, INTERPRO:IPR002290; go_function: kinase activity [goid 0016301] At1g01550 chr1:000200526 0.0 W/200526-201575 expressed protein At1g01560 chr1:000202345 0.0 W/202345-202508,202782-202911,202991-203128,203267-203662 mitogen-activated protein kinase, putative / MAPK, putative (MPK11) mitogen-activated protein kinase, putative /MAPK, putative (MPK11) mitogen-activated protein kinase (MAPK)(AtMPK11), PMID:12119167; go_function: MAP kinase activity [goid 0004707]; go_function: kinase activity [goid 0016301]; go_process: signal transduction [goid 0007165] At1g01570 chr1:000205176 0.0 W/205176-205949,206692-207243,207325-207435 fringe-related protein At1g01580 chr1:000209395 0.0 W/209395-209608,209764-209866,209950-210144,210385-210619,211052-211379,211474-211717,211855-212573,212671-212810 ferric-chelate reductase, putative contains Pfam profile: PF01794 ferric reductase like transmembrane component; go_component: membrane [goid 0016020]; go_function: ferric-chelate reductase activity [goid 0000293]; go_process: electron transport [goid 0006118] At1g01580 chr1:000209395 0.0 W/209395-209608,209764-209866,209950-210144,210385-210619,211052-211379,211474-211717,211855-212573,212671-213041 ferric-chelate reductase, putative contains Pfam profile: PF01794 ferric reductase like transmembrane component; go_component: membrane [goid 0016020]; go_function: ferric-chelate reductase activity [goid 0000293]; go_process: electron transport [goid 0006118] At1g01590 chr1:000214229 0.0 W/214229-214406,214480-214582,214697-214897,215317-215554,215633-215960,216044-216293,216414-217090,217165-217304 ferric-chelate reductase, putative At1g01600 chr1:000219200 0.0 W/219200-219621,219752-220994 cytochrome P450, putative go_function: cytochrome P450 activity [goid 0015034]; go_function: oxygen binding [goid 0019825] At1g01610 chr1:000221950 0.0 C/221950-222359,222622-223096,223551-223866,223945-224255 phospholipid/glycerol acyltransferase family protein phospholipid/glycerol acyltransferase familyprotein go_function: acyltransferase activity [goid 0008415]; go_process: metabolism [goid 0008152] At1g01620 chr1:000225986 0.0 C/225986-226081,226171-226311,226396-226691,226849-227176 plasma membrane intrinsic protein 1C (PIP1C) / aquaporin PIP1.3 (PIP1.3) / transmembrane protein B (TMPB) plasma membrane intrinsic protein 1C (PIP1C) /aquaporin PIP1.3 (PIP1.3) / transmembrane protein B go_component: plasma membrane [goid 0005886]; go_component: membrane [goid 0016020]; go_function: water channel activity [goid 0015250]; go_process: transport [goid 0006810]; go_process: water transport [goid 0006833] At1g01630 chr1:000229206 0.0 W/229206-229343,229429-229724,229829-229934,230349-230459,230559-230675 SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative SEC14 cytosolic factor, putative /phosphoglyceride transfer protein, putative similar to polyphosphoinositide binding protein Ssh2p GB:AAB94599 GI:2739046 from [Glycine max]; go_function: transporter activity [goid 0005215]; go_process: transport [goid 0006810] At1g01640 chr1:000231164 0.0 C/231164-231655,231784-231915 speckle-type POZ protein-related similar to Speckle-type POZ protein (SP:O43791) [Homo sapiens]; go_function: protein binding [goid 0005515] At1g01650 chr1:000233188 0.0 C/233188-233297,233387-233470,233548-233618,234250-234392,234529-234621,234935-234988,235718-235752,235845-235939,235948-236027,236145-236296,236429-236548,236673-236784,236865-237023,237504-237588,238778-238860 protease-associated (PA) domain-containing protein protease-associated (PA) domain-containingprotein go_function: peptidase activity [goid 0008233]; go_process: proteolysis and peptidolysis [goid 0006508] At1g01660 chr1:000240057 0.0 C/240057-240242,240352-240672,240744-240884,240960-241226,241306-241443,241539-241719,241805-241909,241983-242113,242214-242290,242449-242608 U-box domain-containing protein At1g01670 chr1:000242943 0.0 C/242943-243128,243336-243746,244035-244182,244257-244361,244505-244635,244770-244873,245151-245163 U-box domain-containing protein At1g01680 chr1:000246411 0.0 C/246411-246608,246731-246853,246949-247078,247167-247268,247362-247492,247577-247680,248191-248329 U-box domain-containing protein At1g01680 chr1:000246411 0.0 C/246411-246608,246731-246853,246949-247078,247167-247268,247362-247492,247577-247680,248191-248367 U-box domain-containing protein At1g01690 chr1:000249242 0.0 W/249242-249306,249543-249693,249774-249930,250014-250151,250536-250588,250669-250863,251004-251066,251101-251184,251260-251316,251399-251440,251922-252006,252121-252193,253024-253457,253531-253662,254210-254380,257225-257460,259011-259094,259163-259171 expressed protein At1g01700 chr1:000259495 0.0 C/259495-259614,259690-260034,260118-260417,260508-260582,260670-260824,260921-261037,261129-261474 expressed protein At1g01710 chr1:000262950 0.0 W/262950-262965,263047-263139,263232-263299,263369-263444,263526-263572,263645-263770,263857-263934,264073-264160,264280-264392,264520-264582,264657-264712,264797-264901,265021-265077,265336-265437,265578-265626,265777-265845,265952-266029 acyl-CoA thioesterase family protein go_function: acyl-CoA thioesterase activity [goid 0016291]; go_function: cyclic nucleotide binding [goid 0030551]; go_process: acyl-CoA metabolism [goid 0006637] At1g01720 chr1:000268471 0.0 W/268471-268630,268717-268994,269083-269514 no apical meristem (NAM) family protein similar to NAC domain protein NAM GB:AAD17313 GI:4325282 from [Arabidopsis thaliana]; go_function: transcription factor activity [goid 0003700]; go_function: transcriptional activator activity [goid 0016563]; go_process: development [goid 0007275]; go_process: response to wounding [goid 0009611] At1g01725 chr1:000270016 0.0 C/270016-270090,270622-270735 expressed protein At1g01730 chr1:000271002 0.0 W/271002-271289,271379-271433,271541-271872 expressed protein At1g01740 chr1:000272111 0.0 C/272111-272362,272445-272555,272651-272983,273064-273149,273234-273339,273429-273562,273653-273788,273863-274083,274167-274239 protein kinase family protein At1g01750 chr1:000275528 0.0 W/275528-275530,275632-275897,275973-276126 actin-depolymerizing factor, putative contains Pfam profile PF00241: Cofilin/tropomyosin-type actin-binding protein; go_component: intracellular [goid 0005622]; go_function: actin depolymerizing activity [goid 0003787] At1g01760 chr1:000276866 0.0 C/276866-276989,277077-277153,277232-277401,277493-277606,277717-277803,277929-278033,278085-278252,278316-278448 adenosine-deaminase family / editase family At1g01770 chr1:000278759 0.0 W/278759-278809,278887-279088,279166-279240,279327-279425,279536-279576,279797-279910,279974-280088,280180-280370,280449-280568,280657-280737,280889-281121,281309-281348,281438-281536,281759-282189,282484-282490 expressed protein At1g01780 chr1:000282919 0.0 W/282919-283053,283132-283231,283314-283336,283444-283533,283813-284082 LIM domain-containing protein At1g01790 chr1:000286606 0.0 W/286606-286623,286717-286807,286997-287133,287221-287280,287395-287514,287642-287710,287789-287854,288087-288176,288401-288505,288593-288721,288882-289091,289237-289386,289539-289592,289718-289776,290028-290094,290170-290346,290439-290495,290578-290652,290747-290869 K+ efflux antiporter, putative (KEA1) Monovalent cation:proton antiporter family 2 (CPA2 family) member, PMID:11500563; go_function: potassium ion transporter activity [goid 0015079]; go_function: potassium:hydrogen antiporter activity [goid 0015386] At1g01800 chr1:000293396 0.0 W/293396-293409,293500-293752,294055-294120,294210-294386,294511-294888 short-chain dehydrogenase/reductase (SDR) family protein short-chain dehydrogenase/reductase (SDR) familyprotein go_function: oxidoreductase activity [goid 0016491] At1g01810 chr1:000295242 0.0 W/295242-295724 hypothetical protein At1g01820 chr1:000296213 0.0 C/296213-296248,296362-296535,296626-296700,296782-296862,296951-297025,297101-297175,297532-297723 peroxisomal biogenesis factor 11 family protein / PEX11 family protein peroxisomal biogenesis factor 11 family protein/ PEX11 family protein go_component: peroxisomal membrane [goid 0005778]; go_process: peroxisome division [goid 0016559] At1g01830 chr1:000298717 0.0 C/298717-300441 armadillo/beta-catenin repeat family protein At1g01840 chr1:000303650 0.0 W/303650-304108 expressed protein At1g01860 chr1:000304439 0.0 C/304439-304504,304697-304807,304880-304963,305038-305090,305174-305258,305347-305442,305547-305702,305785-305934,306045-306275 dimethyladenosine transferase (PFC1) At1g01870 chr1:000306384 0.0 W/306384-306456 tRNA-Val At1g01880 chr1:000306558 0.0 C/306558-306800,306893-307073,307161-307359,307441-307805,307889-308070,308148-308318,308397-308573,308797-308991 DNA repair protein, putative At1g01890 chr1:000309275 0.0 C/309275-309347 tRNA-Lys At1g01900 chr1:000310332 0.0 W/310332-310981,311337-313011 subtilase family protein go_function: subtilase activity [goid 0004289]; go_process: proteolysis and peptidolysis [goid 0006508] At1g01910 chr1:000313595 0.0 C/313595-313759,313880-313995,314087-314225,314441-314551,314652-314802,314891-315015,315577-315831 anion-transporting ATPase, putative contains Pfam profile PF02374: Anion-transporting ATPase; go_component: membrane [goid 0016020]; go_function: ATP binding [goid 0005524]; go_process: anion transport [goid 0006820] At1g01920 chr1:000316204 0.0 W/316204-316257,316344-316440,316539-316713,316792-316897,317008-317090,317167-317193,317294-317456,317561-317642,317765-317845,317979-318040,318145-318201,318296-318433,318565-318813,318986-319101,319204-319296,319372-319507 SET domain-containing protein contains Pfam profile PF00856: SET domain At1g01930 chr1:000320041 0.0 C/320041-320145,320252-320296,320380-320457,320769-321422,321751-321865,321958-322406,322513-322809 zinc finger protein-related contains Pfam PF00096: Zinc finger, C2H2 type domain and Prosite PS00028: Zinc finger, C2H2 type, domain At1g01940 chr1:000323082 0.0 W/323082-323084,323208-323282,323679-323840,324258-324416,324636-324719 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein peptidyl-prolyl cis-trans isomerasecyclophilin-type family protein go_function: peptidyl-prolyl cis-trans isomerase activity [goid 0003755]; go_process: protein folding [goid 0006457] At1g01950 chr1:000325473 0.0 W/325473-325641,325913-326013,326106-326228,326332-326517,326594-326815,326931-327084,327237-327386,327488-327576,327663-327866,328000-328107,328188-328322,328424-328555,328898-329030,329119-329211,329311-329436,329573-329698,329781-329924,330027-330155,330243-330403 armadillo/beta-catenin repeat family protein / kinesin motor family protein armadillo/beta-catenin repeat family protein /kinesin motor family protein contains Pfam profiles PF00225: Kinesin motor domain, PF00514: Armadillo/beta-catenin-like repeat; go_function: microtubule motor activity [goid 0003777] At1g01950 chr1:000325473 0.0 W/325473-325641,325913-326013,326106-326228,326332-326517,326594-326815,326931-327084,327237-327386,327488-327576,327663-327866,328000-328107,328188-328322,328424-328555,328898-329030,329119-329211,329311-329436,329573-329698,329781-329924,330027-330155,330243-330511 armadillo/beta-catenin repeat family protein / kinesin motor family protein armadillo/beta-catenin repeat family protein /kinesin motor family protein contains Pfam profiles PF00225: Kinesin motor domain, PF00514: Armadillo/beta-catenin-like repeat; go_function: microtubule motor activity [goid 0003777] At1g01960 chr1:000330830 0.0 C/330830-331423,331534-332183,332276-332633,332724-333045,333129-333628,333905-334178,334471-334763,334899-335321,335419-335773,335916-336233,336417-337582 guanine nucleotide exchange family protein contains Pfam profile PF01369: Sec7 domain; go_function: guanyl-nucleotide exchange factor activity [goid 0005085] At1g01970 chr1:000338538 0.0 W/338538-338987,339126-339905 pentatricopeptide (PPR) repeat-containing protein pentatricopeptide (PPR) repeat-containingprotein contains Pfam profile PF01535: PPR repeat At1g01980 chr1:000340374 0.0 C/340374-341999 FAD-binding domain-containing protein At1g01990 chr1:000343462 0.0 C/343462-344199 expressed protein At1g02000 chr1:000346052 0.0 W/346052-347356 NAD-dependent epimerase/dehydratase family protein contains Pfam profile PF01370 NAD dependent epimerase/dehydratase family; go_function: catalytic activity [goid 0003824]; go_process: nucleotide-sugar metabolism [goid 0009225] At1g02010 chr1:000348046 0.0 W/348046-348127,348212-348267,348373-348454,348562-348682,348735-348785,348880-348976,349238-349366,349550-349720,349803-349886,350049-350147,350226-350296,350474-350570,350658-350783,350871-350966,351044-351160,351252-351329,351412-351632,351729-351819,351912-352001,352126-352197 cytokinesis-related Sec1 protein, putative At1g02020 chr1:000353214 0.0 C/353214-354845 nitroreductase family protein contains Prosite PS00343: Gram-positive cocci surface proteins 'anchoring' hexapeptide; go_function: oxidoreductase activity, acting on NADH or NADPH, nitrogenous group as acceptor [goid 0016657]; go_process: metabolism [goid 0008152] At1g02030 chr1:000355385 0.0 C/355385-356188 zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type; go_function: nucleic acid binding [goid 0003676]; go_function: transcription factor activity [goid 0003700]; go_function: zinc ion binding [goid 0008270] At1g02040 chr1:000358104 0.0 C/358104-359078 zinc finger (C2H2 type) family protein At1g02050 chr1:000359164 0.0 C/359164-360149,360240-360441 chalcone and stilbene synthase family protein go_process: phenylpropanoid biosynthesis [goid 0009699] At1g02060 chr1:000360918 0.0 C/360918-363094 pentatricopeptide (PPR) repeat-containing protein At1g02065 chr1:000365625 0.0 W/365625-366325,366723-366859,366986-367149 squamosa promoter-binding protein-like 8 (SPL8) contains Pfam profile PF03110: SBP domain; go_component: nucleus [goid 0005634]; go_function: DNA binding [goid 0003677]; go_process: megasporogenesis [goid 0009554]; go_process: microsporogenesis [goid 0009556] At1g02065 chr1:000365625 0.0 W/365625-366365 squamosa promoter-binding protein-like 8 (SPL8) contains Pfam profile PF03110: SBP domain; go_component: nucleus [goid 0005634]; go_function: DNA binding [goid 0003677]; go_process: megasporogenesis [goid 0009554]; go_process: microsporogenesis [goid 0009556] At1g02070 chr1:000370445 0.0 C/370445-370751,370859-370947 expressed protein At1g02080 chr1:000373694 0.0 W/373694-373786,373892-374189,374272-374500,374583-374922,375122-375238,375325-375453,375528-375719,375808-376002,376114-376251,376352-376474,376562-376815,376925-377028,377211-377305,377391-377615,377881-378036,378119-378191,378298-378365,378504-378649,378746-378854,378943-379089,379183-379230,379305-379433,379528-379770,379866-380003,380089-380174,380270-380375,380602-380697,380846-380998,381150-381332,381405-381634,381730-381832,381912-382040,382127-382171,382373-382567,382803-382929,383030-383130,383395-383529,383608-383688,384084-384230,384318-384449,384558-384605,384694-384840,384908-384969,385171-385324,385432-385623,385713-385817,385909-386043,386133-386333,386428-386682 transcriptional regulator-related contains TIGRFAM TIGR01612: reticulocyte binding protein; similar to General negative regulator of transcription subunit 1 (SP:P25655) {Saccharomyces cerevisiae}; Location of ESTs gb|T44328 and gb|AA395265; go_function: transcription regulator activity [goid 0030528] At1g02080 chr1:000373694 0.0 W/373694-373786,373892-374189,374272-374500,374583-374922,375122-375238,375325-375453,375528-375719,375808-376002,376114-376251,376352-376474,376562-376815,376925-377028,377211-377305,377391-377615,377881-378036,378119-378191,378298-378365,378504-378649,378746-378854,378943-379089,379183-379230,379305-379433,379528-379770,379866-380003,380089-380174,380270-380375,380602-380697,380846-380998,381150-381332,381405-381634,381730-381832,381912-382040,382127-382171,382373-382567,382803-382929,383030-383130,383395-383529,383608-383688,384084-384230,384318-384449,384558-384605,384694-384840,384908-384969,385171-385324,385432-385623,385713-385817,385909-386043,386133-386333,386428-386820 transcriptional regulator-related contains TIGRFAM TIGR01612: reticulocyte binding protein; similar to General negative regulator of transcription subunit 1 (SP:P25655) {Saccharomyces cerevisiae}; Location of ESTs gb|T44328 and gb|AA395265; go_function: transcription regulator activity [goid 0030528] At1g02090 chr1:000388223 0.0 C/388223-388406,388539-388609,388716-388760,388851-388940,389050-389138,389226-389301,389410-389568 COP9 signalosome complex subunit 7ii / CSN complex subunit 7ii (CSN7) (COP15) / FUSCA protein (FUS5) COP9 signalosome complex subunit 7ii / CSNcomplex subunit 7ii (CSN7) (COP15) / FUSCA protein (FUS5) identical to CSN complex subunit 7ii [Arabidopsis thaliana] GI:18056671, FUS5 protein of the COP9 complex GI:3288823; identical to cDNA CSN complex subunit CSN7, alternatively spliced; go_component: nucleus [goid 0005634]; go_component: signalosome complex [goid 0008180]; go_function: MAP kinase kinase activity [goid 0004708]; go_process: photomorphogenesis [goid 0009640] At1g02100 chr1:000389876 0.0 W/389876-389943,390037-390250,390352-390399,390483-390564,390762-390864,391003-391123,391216-391263,391458-391541,391652-391716,392021-392072,392262-392300,392374-392448 leucine carboxyl methyltransferase family protein leucine carboxyl methyltransferase familyprotein similar to Leucine carboxyl methyltransferase (Protein-leucine O- methyltransferase) (CGI-68) (SP:Q9UIC8) {Homo sapiens}; go_function: methyltransferase activity [goid 0008168] At1g02100 chr1:000389876 0.0 W/389876-389943,390037-390250,390352-390399,390483-390564,390762-390864,391003-391123,391216-391263,391458-391541,391652-391716,392021-392076,392262-392293 leucine carboxyl methyltransferase family protein leucine carboxyl methyltransferase familyprotein similar to Leucine carboxyl methyltransferase (Protein-leucine O- methyltransferase) (CGI-68) (SP:Q9UIC8) {Homo sapiens}; go_function: methyltransferase activity [goid 0008168] At1g02110 chr1:000392939 0.0 W/392939-393875,393966-394153,394228-394297,394370-394451,394672-395434 proline-rich family protein At1g02110 chr1:000392939 0.0 W/392939-393875,393966-394153,394228-394297,394370-394451,394672-395554 proline-rich family protein At1g02120 chr1:000395623 0.0 W/395623-395946,396029-396088,396291-396356,396439-396534,396609-396725,396793-396863,396941-397098,397703-397722,397877-397964,398292-398346,398460-398526,398614-398713,399182-399393,399484-399720 GRAM domain-containing protein-related At1g02120 chr1:000395623 0.0 W/395623-395946,396029-396088,396291-396356,396439-396534,396609-396725,396793-396863,396941-397098,397703-397722,397877-397964,398292-398346,398460-398526,398614-398713,399182-399393,399484-399774 GRAM domain-containing protein-related At1g02130 chr1:000400350 0.0 C/400350-400446,400725-400828,400931-401086,401164-401235,401323-401370,401461-401508,401595-401667,401775-401788 Ras-related protein (ARA-5) / small GTP-binding protein, putative Ras-related protein (ARA-5) / small GTP-bindingprotein, putative go_function: GTP binding [goid 0005525] At1g02140 chr1:000403467 0.0 C/403467-403526,403771-403947,404186-404401 mago nashi family protein contains Pfam PF02792: Mago nashi protein domain; go_component: nucleus [goid 0005634]; go_process: sex determination [goid 0007530] At1g02150 chr1:000408779 0.0 W/408779-409138,409219-410433 pentatricopeptide (PPR) repeat-containing protein pentatricopeptide (PPR) repeat-containingprotein contains Pfam profile: PF01535 PPR repeat At1g02160 chr1:000410803 0.0 W/410803-410893,411177-411253,411336-411383 expressed protein At1g02170 chr1:000411883 0.0 W/411883-412258,412460-412790,412883-413003,413080-413295,413367-413426 latex-abundant family protein (AMC1) / caspase family protein latex-abundant family protein (AMC1) / caspasefamily protein contains Pfam profile PF00656: ICE-like protease (caspase) p20 domain; go_function: caspase activity [goid 0030693]; go_process: proteolysis and peptidolysis [goid 0006508] At1g02170 chr1:000411883 0.0 W/411883-412258,412460-412790,412883-413003,413080-413295,413367-413932 latex-abundant family protein (AMC1) / caspase family protein latex-abundant family protein (AMC1) / caspasefamily protein contains Pfam profile PF00656: ICE-like protease (caspase) p20 domain; go_function: caspase activity [goid 0030693]; go_process: proteolysis and peptidolysis [goid 0006508] At1g02180 chr1:000413619 0.0 C/413619-414217,414424-414505 ferredoxin-related At1g02190 chr1:000415154 0.0 W/415154-415670,415742-415961,416045-416435,416731-416838,416962-417162,417248-417520,417623-417796 CER1 protein, putative go_function: catalytic activity [goid 0003824] At1g02190 chr1:000415154 0.0 W/415154-415670,415742-415961,416045-416435,416743-416838,416962-417162,417248-417520,417623-417796 CER1 protein, putative go_function: catalytic activity [goid 0003824] At1g02205 chr1:000418818 0.0 W/418818-418877,418987-419210,419297-419529,419675-419894,420514-420889,420984-421091,421191-421391,421526-421633,421735-421908,421981-422154 CER1 protein go_function: octadecanal decarbonylase activity [goid 0009924]; go_process: wax biosynthesis [goid 0010025]; go_process: cuticle biosynthesis [goid 0042335] At1g02205 chr1:000418818 0.0 W/418818-418877,418987-419210,419297-419529,419675-419894,420514-420889,420984-421091,421191-421391,421526-421633,421735-421947 CER1 protein go_function: octadecanal decarbonylase activity [goid 0009924]; go_process: wax biosynthesis [goid 0010025]; go_process: cuticle biosynthesis [goid 0042335] At1g02210 chr1:000427548 0.0 C/427548-427811 regulator of shoot apical meristem-related At1g02220 chr1:000428902 0.0 C/428902-429099,429248-429370,429462-429776,429851-429997,430069-430316,430414-430567 no apical meristem (NAM) family protein At1g02230 chr1:000433031 0.0 C/433031-433698,435197-435323,435450-435563,435650-435850,435916-436128,436277-436539,436622-436775 no apical meristem (NAM) family protein At1g02250 chr1:000437951 0.0 C/437951-438106,438218-438334,438422-438679,438783-438887,439052-439314,439406-439559 no apical meristem (NAM) family protein At1g02260 chr1:000440757 0.0 C/440757-441013,441136-441325,441398-442459 transmembrane protein, putative contains 8 transmembrane domains; go_component: integral to membrane [goid 0016021]; go_function: transporter activity [goid 0005215] At1g02270 chr1:000443301 0.0 C/443301-443525,443629-443736,443979-444089,444258-444383,444489-444597,444683-444759,444846-445066,445454-445559,445648-445752,445844-445942,446030-446197 endonuclease/exonuclease/phosphatase family protein / calcium-binding EF hand family protein endonuclease/exonuclease/phosphatase familyprotein / calcium-binding EF hand family protein go_function: catalytic activity [goid 0003824]; go_function: calcium ion binding [goid 0005509] At1g02280 chr1:000448665 0.0 C/448665-448733,448812-448973,449055-449123,449225-449489,449714-449838,449939-450046,450151-450246 GTP-binding protein (TOC33) Carboxyl-terminal end highly similar to GTP-binding protein SP:U43377, location of EST gb|AA394770 and gb|R30089; identical to cDNA for chloroplast atToc33 protein GI:11557972; go_component: chloroplast outer membrane [goid 0009707]; go_function: GTP binding [goid 0005525]; go_process: protein-chloroplast targeting [goid 0045036] At1g02290 chr1:000450646 0.0 C/450646-451977 expressed protein At1g02300 chr1:000453288 0.0 W/453288-453365,453594-453647,453730-453810,453907-454063,454197-454336,454415-454540,454622-454840,454927-455040,455112-455147,455242-455376 cathepsin B-like cysteine protease, putative go_function: cysteine-type peptidase activity [goid 0008234]; go_process: proteolysis and peptidolysis [goid 0006508] At1g02300 chr1:000453288 0.0 W/453288-453365,453594-453647,453730-453810,453907-454063,454197-454336,454415-454540,454622-454840,454927-455040,455112-455147,455242-455463 cathepsin B-like cysteine protease, putative go_function: cysteine-type peptidase activity [goid 0008234]; go_process: proteolysis and peptidolysis [goid 0006508] At1g02305 chr1:000455816 0.0 W/455816-455902,456178-456231,456314-456394,456490-456646,456757-456761,456843-456917,457010-457135,457211-457429,457514-457627,457716-457751,457840-457974 cathepsin B-like cysteine protease, putative contains Pfam profile PF00112: Papain family cysteine protease; go_function: cysteine-type peptidase activity [goid 0008234]; go_process: proteolysis and peptidolysis [goid 0006508] At1g02310 chr1:000458243 0.0 C/458243-458636,458732-458940,459021-459143,459503-459682,460323-460652 glycosyl hydrolase family protein 5 / cellulase family protein / (1-4)-beta-mannan endohydrolase, putative glycosyl hydrolase family protein 5 / cellulasefamily protein / (1-4)-beta-mannan endohydrolase, go_function: hydrolase activity\, hydrolyzing O-glycosyl compounds [goid 0004553] At1g02320 chr1:000461828 0.0 W/461828-461974 hypothetical protein At1g02330 chr1:000462202 0.0 C/462202-462383,462475-462632,462727-462800,462876-462999,463123-463323,463421-463521 expressed protein At1g02335 chr1:000463976 0.0 C/463976-464669 pseudo At1g02340 chr1:000465933 0.0 C/465933-466247,466732-466797,466958-467086,467186-467552,467684-467685 long hypocotyl in far-red 1 (HFR1) / reduced phytochrome signaling (REP1) / basic helix-loop-helix FBI1 protein (FBI1) / reduced sensitivity to far-red light (RSF1) / bHLH protein 26 (BHLH026) (BHLH26) long hypocotyl in far-red 1 (HFR1) / reducedphytochrome signaling (REP1) / basic helix-loop-helix FBI1 go_function: DNA binding [goid 0003677]; go_function: transcription factor activity [goid 0003700]; go_process: signal transduction [goid 0007165]; go_process: red\, far-red light phototransduction [goid 0009585] At1g02350 chr1:000469818 0.0 W/469818-469971,470252-470288,470371-470482,470574-470693 protoporphyrinogen oxidase-related At1g02360 chr1:000472138 0.0 C/472138-472507,472668-473116 chitinase, putative go_function: chitinase activity [goid 0004568] At1g02370 chr1:000474516 0.0 W/474516-474887,475142-476383 pentatricopeptide (PPR) repeat-containing protein pentatricopeptide (PPR) repeat-containingprotein contains Pfam profile PF01535: PPR repeat At1g02380 chr1:000477814 0.0 W/477814-478443 expressed protein At1g02390 chr1:000480921 0.0 W/480921-481619,482270-483163 phospholipid/glycerol acyltransferase family protein phospholipid/glycerol acyltransferase familyprotein go_function: acyltransferase activity [goid 0008415]; go_process: metabolism [goid 0008152] At1g02400 chr1:000486964 0.0 W/486964-487364,488720-489062,489146-489391 gibberellin 2-oxidase, putative / GA2-oxidase, putative gibberellin 2-oxidase, putative / GA2-oxidase,putative similar to dioxygenase GI:1666096 from [Marah macrocarpus]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain; go_function: gibberellin 2-beta-dioxygenase activity [goid 0045543]; go_process: gibberellic acid catabolism [goid 0045487] At1g02405 chr1:000490093 0.0 C/490093-490497 proline-rich family protein At1g02410 chr1:000491300 0.0 W/491300-491379,491488-491803,491907-491959,492086-492158,492248-492352,492443-492523,492607-492762 cytochrome c oxidase assembly protein CtaG / Cox11 family cytochrome c oxidase assembly protein CtaG /Cox11 family similar to Cytochrome c oxidase assembly protein COX11, mitochondrial precursor (SP:Q9Y6N1){Homo sapiens}; contains Pfam PF04442: Cytochrome c oxidase assembly protein CtaG / Cox11 At1g02420 chr1:000493683 0.0 W/493683-495158 pentatricopeptide (PPR) repeat-containing protein At1g02430 chr1:000495175 0.0 C/495175-495259,495350-495489,495563-495682,495757-495833,495912-495963 ADP-ribosylation factor, putative go_function: ARF small monomeric GTPase activity [goid 0003926] At1g02440 chr1:000496586 0.0 C/496586-496670,496760-496899,496972-497091,497165-497241,497329-497479 ADP-ribosylation factor, putative At1g02450 chr1:000498052 0.0 C/498052-498480 NPR1/NIM1-interacting protein 1 (NIMIN-1) identical to cDNA NIMIN-1 protein (nimin-1 gene)GI:12057153 At1g02460 chr1:000504897 0.0 C/504897-505407,505499-505583,505845-506052,506137-506184,506367-506534,506644-507099 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein glycoside hydrolase family 28 protein /polygalacturonase (pectinase) family protein contains PF00295: Glycosyl hydrolases family 28 (polygalacturonases); go_function: polygalacturonase activity [goid 0004650]; go_process: carbohydrate metabolism [goid 0005975] At1g02470 chr1:000511916 0.0 C/511916-511990,512074-512121,512214-512262,512378-512430,512525-512620,513147-513246,513332-513573 expressed protein At1g02475 chr1:000514110 0.0 C/514110-514184,514271-514318,514422-514470,514553-514605,514705-514800,514892-514991,515093-515331 expressed protein At1g02480 chr1:000515494 0.0 W/515494-515566 tRNA-Phe At1g02490 chr1:000516618 0.0 W/516618-516734 hypothetical protein At1g02500 chr1:000519037 0.0 W/519037-520218 S-adenosylmethionine synthetase 1 (SAM1) go_function: methionine adenosyltransferase activity [goid 0004478]; go_process: S-adenosylmethionine biosynthesis [goid 0006556] At1g02510 chr1:000520687 0.0 C/520687-520804,520890-521626 outward rectifying potassium channel, putative (KCO4) outward rectifying potassium channel, putative(KCO4) At1g02520 chr1:000524134 0.0 W/524134-524436,524521-524575,524662-524837,524917-525138,525224-525462,525546-527202,527311-527577,527658-527921,528010-528309,528392-528745 multidrug resistance P-glycoprotein, putative At1g02530 chr1:000529836 0.0 W/529836-530099,530182-530236,530403-530578,530681-530902,530980-531218,531325-533005,533079-533345,533453-533716,533808-534107,534189-534542 multidrug resistance P-glycoprotein, putative go_function: ATP-binding cassette (ABC) transporter activity [goid 0004009] At1g02540 chr1:000534827 0.0 C/534827-535699 hypothetical protein At1g02550 chr1:000536483 0.0 W/536483-537211 invertase/pectin methylesterase inhibitor family protein At1g02560 chr1:000538000 0.0 W/538000-538130,538209-538328,538419-538533,538627-538719,538808-538853,538936-539008,539255-539289,539391-539479,539611-539805 ATP-dependent Clp protease proteolytic subunit (ClpP1) ATP-dependent Clp protease proteolytic subunit(ClpP1) contains Pfam profile PF00574: Clp protease; contains TIGRfam profile TIGR00493: ATP-dependent Clp protease, proteolytic subunit ClpP; go_component: thylakoid (sensu Viridiplantae) [goid 0009534]; go_component: chloroplast stroma [goid 0009570]; go_function: endopeptidase Clp activity [goid 0008462]; go_process: ATP-dependent proteolysis [goid 0006510] At1g02570 chr1:000541380 0.0 W/541380-541792,541856-542093,543339-543983 expressed protein At1g02580 chr1:000544796 0.0 W/544796-544804,544973-545062,545632-545963,546062-546235,546313-546400,546512-546637,546727-546774,546871-546939,547024-547172,547248-547374,547463-547671,547748-547879,547970-548051,548134-548181,548311-548439,548525-548602,548815-548994 maternal embryogenesis control protein / MEDEA (MEA) maternal embryogenesis control protein / MEDEA(MEA) contains Pfam profile PF00856: SET domain; go_component: nucleus [goid 0005634]; go_function: transcription factor activity [goid 0003700]; go_process: negative regulation of transcription of homeotic gene (Polycomb group) [goid 0006340] At1g02590 chr1:000552138 0.0 C/552138-552182,552275-552373,552456-552506,552687-552761 aldehyde oxidase, putative At1g02600 chr1:000552640 0.0 W/552640-552711 tRNA-His At1g02610 chr1:000553181 0.0 C/553181-553261,553395-553475,553600-553677,555572-555643,555726-555854 zinc finger (C3HC4-type RING finger) family protein zinc finger (C3HC4-type RING finger) familyprotein At1g02620 chr1:000557092 0.0 W/557092-557108,557317-557668 GTP-binding protein (SAR1A) contains domain PF00025: ADP-ribosylation factor family; go_function: ARF small monomeric GTPase activity [goid 0003926] At1g02620 chr1:000557092 0.0 W/557092-557108,557317-557986 GTP-binding protein (SAR1A) contains domain PF00025: ADP-ribosylation factor family; go_function: ARF small monomeric GTPase activity [goid 0003926] At1g02630 chr1:000561007 0.0 C/561007-561695,561902-562382 equilibrative nucleoside transporter, putative (ENT8) equilibrative nucleoside transporter, putative(ENT8) At1g02640 chr1:000564293 0.0 W/564293-564697,565433-565711,565784-565953,566043-566140,566226-567580 glycosyl hydrolase family 3 protein go_function: hydrolase activity\, hydrolyzing O-glycosyl compounds [goid 0004553] At1g02650 chr1:000568704 0.0 W/568704-568739,568832-569223,569305-570418 DNAJ heat shock N-terminal domain-containing protein DNAJ heat shock N-terminal domain-containingprotein At1g02660 chr1:000572187 0.0 C/572187-572759,572836-573252,573338-573397,573489-573953,574120-574746 lipase class 3 family protein go_function: triacylglycerol lipase activity [goid 0004806]; go_process: lipid metabolism [goid 0006629] At1g02670 chr1:000576046 0.0 W/576046-576145,576548-576613,576850-576912,576994-577592,577784-577941,577979-578079,578181-578244,578546-578620,578722-578791,578895-579017,579196-579312,579421-579525,579647-579799,579879-579967,580050-580130,580227-580299 DNA repair protein, putative At1g02680 chr1:000581084 0.0 W/581084-581186,581278-581315,581497-581556,581644-581718,581815-581919 transcription initiation factor IID (TFIID) 18 kDa subunit (TAFII-18) family protein transcription initiation factor IID (TFIID) 18kDa subunit (TAFII-18) family protein contains Pfam PF02269: Transcription initiation factor IID, 18kD subunit; go_component: transcription factor complex [goid 0005667]; go_function: RNA polymerase II transcription factor activity [goid 0003702]; go_process: transcription initiation [goid 0006352] At1g02690 chr1:000584397 0.0 W/584397-584618,584860-584956,585053-585144,585237-585368,585500-585685,585776-585942,586023-586101,586192-586320,586439-586566,586649-587036 importin alpha-2 subunit, putative go_function: protein transporter activity [goid 0008565]; go_process: intracellular protein transport [goid 0006886] At1g02690 chr1:000584397 0.0 W/584397-584618,584860-584956,585053-585144,585237-585368,585500-585685,585779-585942,586023-586101,586192-586320,586439-586566,586649-587036 importin alpha-2 subunit, putative go_function: protein transporter activity [goid 0008565]; go_process: intracellular protein transport [goid 0006886] At1g02700 chr1:000588367 0.0 W/588367-588540,588663-589232 expressed protein At1g02710 chr1:000589706 0.0 C/589706-589996 glycine-rich protein At1g02720 chr1:000592115 0.0 W/592115-593200 glycosyl transferase family 8 protein contains Pfam glycosyl transferase family 8 domain PF01501; go_function: transferase activity, transferring glycosyl groups [goid 0016757]; go_function: transferase activity, transferring hexosyl groups [goid 0016758]; go_process: carbohydrate biosynthesis [goid 0016051] At1g02730 chr1:000594697 0.0 C/594697-596478,596572-597382,597521-598473 cellulose synthase family protein go_function: cellulose synthase activity [goid 0016759]; go_process: polysaccharide biosynthesis [goid 0000271]; go_process: cell wall biosynthesis (sensu Magnoliophyta) [goid 0009832] At1g02740 chr1:000599734 0.0 C/599734-599803,599892-599976,600065-600234,600434-600513,600721-600825,600915-600976,601227-601328,601640-601706,601812-602021 MRG family protein similar to Transcription factor-like protein MRG15 (MORF-related gene 15 protein) (MSL3-1 protein) (Protein HSPC008/HSPC061) (SP:Q9UBU8) {Homo sapiens} At1g02740 chr1:000599734 0.0 C/599734-599803,599892-599976,600065-600234,600434-600513,600721-600825,600915-600976,601227-601328,601640-601706,601812-602096 MRG family protein similar to Transcription factor-like protein MRG15 (MORF-related gene 15 protein) (MSL3-1 protein) (Protein HSPC008/HSPC061) (SP:Q9UBU8) {Homo sapiens} At1g02750 chr1:000602673 0.0 W/602673-602754,602980-603125,603784-604134 drought-responsive family protein go_process: response to water deprivation [goid 0009414] At1g02750 chr1:000602673 0.0 W/602673-602754,602980-603125,603784-604286 drought-responsive family protein go_process: response to water deprivation [goid 0009414] At1g02760 chr1:000604402 0.0 W/604402-604474 tRNA-Lys At1g02770 chr1:000605071 0.0 C/605071-605403,605515-605604,605705-605805,605919-606102,606176-606322,606529-606624 expressed protein At1g02780 chr1:000608120 0.0 C/608120-608147,608242-608309,608398-608711,608816-608938,609280-609391 60S ribosomal protein L19 (RPL19A) go_component: ribosome [goid 0005840]; go_function: structural constituent of ribosome [goid 0003735]; go_process: protein biosynthesis [goid 0006412]; go_process: ribosome biogenesis [goid 0007046] At1g02790 chr1:000610681 0.0 C/610681-610935,611026-611529,611618-611920,612019-612225 exopolygalacturonase / galacturan 1,4-alpha-galacturonidase (PGA3) / pectinase exopolygalacturonase / galacturan1,4-alpha-galacturonidase (PGA3) / pectinase go_function: polygalacturonase activity [goid 0004650]; go_process: carbohydrate metabolism [goid 0005975] At1g02800 chr1:000613386 0.0 C/613386-613706,613994-614157,614240-614345,614449-614610,614722-614814,614989-615189,615277-615483,615852-616103 endo-1,4-beta-glucanase / cellulase (CEL2) ATCEL2 GI:3132891 from [Arabidopsis thaliana]; go_function: hydrolase activity\, hydrolyzing O-glycosyl compounds [goid 0004553]; go_function: cellulase activity [goid 0008810]; go_process: pattern specification [goid 0007389] At1g02810 chr1:000618284 0.0 W/618284-619328,619639-620333 pectinesterase family protein go_component: cell wall (sensu Magnoliophyta) [goid 0009505]; go_function: pectinesterase activity [goid 0030599] At1g02813 chr1:000620773 0.0 W/620773-621222 expressed protein At1g02816 chr1:000621637 0.0 W/621637-622137 expressed protein At1g02820 chr1:000623933 0.0 C/623933-624134,624231-624304 late embryogenesis abundant 3 family protein / LEA3 family protein late embryogenesis abundant 3 family protein /LEA3 family protein contains Pfam profile PF03242: Late embryogenesis abundant protein; go_process: embryonic development [goid 0009790] At1g02830 chr1:000625145 0.0 C/625145-625292,625373-625608 60S ribosomal protein L22 (RPL22A) At1g02840 chr1:000626918 0.0 W/626918-627004,627100-627165,627308-627382,627482-627614,627701-627747,627835-627892,627970-628019,628112-628168,628246-628469,628935-628995 pre-mRNA splicing factor SF2 (SF2) / SR1 protein pre-mRNA splicing factor SF2 (SF2) / SR1protein go_component: nucleus [goid 0005634]; go_function: RNA binding [goid 0003723]; go_function: pre-mRNA splicing factor activity [goid 0008248] At1g02840 chr1:000626918 0.0 W/626918-627004,627100-627165,627308-627382,627482-627614,627701-627747,627835-627892,627970-628019,628112-628168,628246-628469,629288-629321,629418-629494,629580-629583 pre-mRNA splicing factor SF2 (SF2) / SR1 protein pre-mRNA splicing factor SF2 (SF2) / SR1protein go_component: nucleus [goid 0005634]; go_function: RNA binding [goid 0003723]; go_function: pre-mRNA splicing factor activity [goid 0008248] At1g02850 chr1:000630569 0.0 W/630569-630703,630832-630895,630978-631033,631104-631179,631265-631336,631431-631518,631603-631858,631928-632043,632128-632348,632421-632449,632528-632615,632716-632806,632884-633085 glycosyl hydrolase family 1 protein TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to hydroxyisourate hydrolase (GI:19569603) [Glycine max]; go_function: hydrolase activity\, hydrolyzing O-glycosyl compounds [goid 0004553] At1g02850 chr1:000630569 0.0 W/630569-630703,630832-630895,630978-631033,631104-631179,631265-631336,631431-631518,631603-631858,632000-632043,632128-632348,632421-632449,632528-632615,632716-632806,632884-633085 glycosyl hydrolase family 1 protein TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to hydroxyisourate hydrolase (GI:19569603) [Glycine max]; go_function: hydrolase activity\, hydrolyzing O-glycosyl compounds [goid 0004553] At1g02850 chr1:000630569 0.0 W/630569-630703,630832-630895,630978-631033,631104-631179,631265-631336,631431-631518,631603-631858,632009-632043,632128-632348,632421-632449,632528-632615,632716-632806,632881-633085 glycosyl hydrolase family 1 protein TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to hydroxyisourate hydrolase (GI:19569603) [Glycine max]; go_function: hydrolase activity\, hydrolyzing O-glycosyl compounds [goid 0004553] At1g02850 chr1:000630569 0.0 W/630569-630703,630832-630895,630978-631033,631104-631179,631265-631336,631431-631518,631603-631858,632009-632043,632128-632348,632421-632449,632528-632615,632716-632806,632884-633085 glycosyl hydrolase family 1 protein TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to hydroxyisourate hydrolase (GI:19569603) [Glycine max]; go_function: hydrolase activity\, hydrolyzing O-glycosyl compounds [goid 0004553] At1g02860 chr1:000635474 0.0 W/635474-635651,635739-635986,636081-636359,636592-636729,636828-636886,636978-637083 SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-related SPX (SYG1/Pho81/XPR1) domain-containing protein/ zinc finger (C3HC4-type RING finger) protein-related contains Pfam profiles PF03105: SPX domain, PF00097: Zinc finger, C3HC4 type (RING finger) At1g02870 chr1:000637401 0.0 C/637401-637514,637602-637723,638258-638603 expressed protein At1g02880 chr1:000643063 0.0 C/643063-643208,643305-643554,643644-643745,643877-643949,644160-644256,644350-644476 thiamin pyrophosphokinase, putative go_function: thiamin diphosphokinase activity [goid 0004788]; go_process: thiamin metabolism [goid 0006772] At1g02880 chr1:000643063 0.0 C/643063-643208,643305-643554,643644-643745,643877-643949,644160-644256,644350-644485 thiamin pyrophosphokinase, putative go_function: thiamin diphosphokinase activity [goid 0004788]; go_process: thiamin metabolism [goid 0006772] At1g02880 chr1:000643063 0.0 C/643063-643208,643305-643554,643644-643745,643877-643972 thiamin pyrophosphokinase, putative go_function: thiamin diphosphokinase activity [goid 0004788]; go_process: thiamin metabolism [goid 0006772] At1g02890 chr1:000645372 0.0 C/645372-645485,645575-645679,645755-645814,645899-646037,646126-646310,646406-646489,646567-646689,646777-646956,647038-647107,647184-647280,647367-647442,647531-647620,647703-647807,647924-647995,648102-648275,648362-648432,648523-648656,648766-648829,648911-649139,649368-649459,649551-649675,649762-650445,650537-650709,650791-650904,651128-651219,651320-651539,651711-651797 AAA-type ATPase family protein similar to mitochondrial sorting protein 1 (MSP1) (TAT-binding homolog 4) (Swiss-Prot:P28737) [Saccharomyces cerevisiae]; go_function: ATPase activity [goid 0016887] At1g02900 chr1:000653976 0.0 C/653976-654338 rapid alkalinization factor (RALF) family protein go_component: extracellular matrix [goid 0005578]; go_process: cell-cell signaling [goid 0007267] At1g02910 chr1:000655749 0.0 C/655749-655823,655933-656029,656134-656234,656317-656505,656588-656745,656827-657058,657142-657277,657392-657495,657856-658125 tetratricopeptide repeat (TPR)-containing protein tetratricopeptide repeat (TPR)-containingprotein At1g02920 chr1:000658886 0.0 C/658886-659316,659423-659471,659556-659705 glutathione S-transferase, putative supported by cDNA GI:443697; go_function: glutathione transferase activity [goid 0004364] At1g02930 chr1:000661363 0.0 C/661363-661790,661901-661949,662042-662191 glutathione S-transferase, putative go_function: glutathione transferase activity [goid 0004364]; go_process: response to stress [goid 0006950] At1g02940 chr1:000663079 0.0 C/663079-663545,663615-663663,663760-663902,664017-664128 glutathione S-transferase, putative At1g02950 chr1:000665308 0.0 C/665308-665777,665862-665910,666114-666256,666351-666420 glutathione S-transferase, putative go_function: glutathione transferase activity [goid 0004364] At1g02950 chr1:000665308 0.0 C/665308-665777,665862-665910,666114-666262,666351-666420 glutathione S-transferase, putative go_function: glutathione transferase activity [goid 0004364] At1g02960 chr1:000667002 0.0 C/667002-667068,667151-667281,667373-667437,667541-667641,667735-667868,667957-668082,668173-668468,668613-668745,668856-668987,669079-669134,669227-669266,669461-669513,669620-669650,669750-669773 expressed protein At1g02960 chr1:000667002 0.0 C/667002-667068,667151-667281,667373-667464,667541-667641,667735-667868,667957-668082,668173-668468,668613-668745,668856-668987,669079-669134,669227-669266,669461-669513,669620-669650,669750-669773 expressed protein At1g02965 chr1:000671661 0.0 C/671661-671783,671919-671974,672106-672145,672332-672406,672518-672548,672651-672814 hypothetical protein At1g02970 chr1:000673408 0.0 W/673408-673706,673964-674024,674099-674165,674441-674704,674813-674880,674968-675077,675187-675227,675340-675494,675592-675945,676044-676127 protein kinase, putative go_function: kinase activity [goid 0016301] At1g02980 chr1:000677869 0.0 W/677869-678002,678094-678193,678289-678522,678592-678873,678971-679060,679148-679288,679368-679490,679578-679730,679821-679997,680103-680264,680341-680484,680559-680777,680858-681025,681111-681212 cullin family protein At1g02990 chr1:000683065 0.0 C/683065-683077,683175-683317,683402-684777,684864-685965,686056-686424,686505-686597,686679-686751,686844-686884 expressed protein At1g03000 chr1:000688057 0.0 C/688057-688146,688281-688364,688458-688602,688679-688950,689036-689158,689251-689409,689532-689813,689985-690173,690399-690579,690757-690898,691121-691364,691443-692078,692175-692453 AAA-type ATPase family protein go_function: ATPase activity [goid 0016887] At1g03010 chr1:000693480 0.0 W/693480-693571,694117-694183,694280-695476,695547-695793,695887-696188 phototropic-responsive NPH3 family protein go_function: signal transducer activity [goid 0004871]; go_process: response to light [goid 0009416] At1g03010 chr1:000693480 0.0 W/693480-693571,694117-694183,694280-695476,695547-695793,695887-696382 phototropic-responsive NPH3 family protein go_function: signal transducer activity [goid 0004871]; go_process: response to light [goid 0009416] At1g03020 chr1:000698207 0.0 C/698207-698515 glutaredoxin family protein At1g03030 chr1:000701621 0.0 W/701621-701681,701775-701875,701976-702019,702106-702183,702276-702468,702567-702597,702679-702737,702828-702901,703012-703098,703195-703256,703353-703381,703482-703568 phosphoribulokinase/uridine kinase family protein phosphoribulokinase/uridine kinase familyprotein Belongs to Interpro IPR006083 Phosphoribulokinase/uridine kinase family; similar to Uridine kinase (Uridine monophosphokinase) (SP:P27515) {Saccharomyces cerevisiae}; ESTs gb|AA585719, gb|AA728503 and gb|T22272 come from this gene; go_function: ATP binding [goid 0005524]; go_function: kinase activity [goid 0016301]; go_process: biosynthesis [goid 0009058] At1g03040 chr1:000704279 0.0 C/704279-704494,704588-704668,705064-705129,705302-705367,705534-705656,706101-706457 basic helix-loop-helix (bHLH) family protein go_function: DNA binding [goid 0003677]; go_function: transcription factor activity [goid 0003700] At1g03050 chr1:000707726 0.0 W/707726-708189,708304-708509,708601-709467,709598-709860 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related epsin N-terminal homology (ENTH)domain-containing protein / clathrin assembly At1g03055 chr1:000710912 0.0 C/710912-711016,711092-711184,711263-711408,711505-711763 expressed protein At1g03060 chr1:000712971 0.0 C/712971-714206,714317-714463,714558-714864,715007-715315,715660-718662,718935-720585,720681-721795,721905-722007,722116-722815,722966-724119,724275-724389,724681-724746,724890-725081,725236-725409,725552-725608,725689-725824,726037-726122,726275-726347,726710-726891 WD-40 repeat family protein / beige-related Similar to gb|U70015 lysosomal trafficking regulator from Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta repeats. ESTs gb|T43386 and gb|AA395236 come from this gene; go_process: signal transduction [goid 0007165] At1g03070 chr1:000730148 0.0 W/730148-730415,730497-730610,730916-731073,731176-731379 expressed protein At1g03080 chr1:000731794 0.0 C/731794-732774,732928-737081,737233-737332 kinase interacting family protein At1g03090 chr1:000739715 0.0 W/739715-740050,740124-740245,740355-740502,740620-740757,740970-741065,741148-741207,741509-741601,741684-741795,741946-742050,742181-742317,742502-742736,742822-742982,743090-743203,743301-743546,743620-743716,743815-743819 methylcrotonyl-CoA carboxylase alpha chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA) methylcrotonyl-CoA carboxylase alpha chain,mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA) go_component: mitochondrion [goid 0005739]; go_function: methylcrotonoyl-CoA carboxylase activity [goid 0004485]; go_process: leucine catabolism [goid 0006552] At1g03090 chr1:000739715 0.0 W/739715-740050,740124-740245,740355-740502,740620-740757,740970-741065,741509-741601,741684-741795,741946-742050,742181-742317,742502-742736,742822-742982,743090-743203,743301-743546,743620-743716,743815-743819 methylcrotonyl-CoA carboxylase alpha chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA) methylcrotonyl-CoA carboxylase alpha chain,mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA) go_component: mitochondrion [goid 0005739]; go_function: methylcrotonoyl-CoA carboxylase activity [goid 0004485]; go_process: leucine catabolism [goid 0006552] At1g03100 chr1:000744026 0.0 C/744026-746407 pentatricopeptide (PPR) repeat-containing protein At1g03103 chr1:000747219 0.0 W/747219-747531,747622-747726,747858-747955 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein protease inhibitor/seed storage/lipid transferprotein (LTP) family protein low similarity to SP:Q42978 Nonspecific lipid-transfer protein 2 precursor (LTP 2) {Oryza sativa}; go_component: membrane [goid 0016020] At1g03106 chr1:000748442 0.0 C/748442-748639 expressed protein At1g03110 chr1:000749359 0.0 W/749359-749495,749785-749949,750118-750298,750416-750472,750557-750627,750796-750874,750957-751016,751120-751223,751297-751357,751428-751796 transducin family protein / WD-40 repeat family protein transducin family protein / WD-40 repeat familyprotein similar to WD-repeat domain 4 protein (GI:9955698) [Mus musculus]; go_function: nucleotide binding [goid 0000166] At1g03120 chr1:000752271 0.0 W/752271-752660,752982-753140 seed maturation family protein At1g03130 chr1:000753528 0.0 C/753528-754142 photosystem I reaction center subunit II, chloroplast, putative / photosystem I 20 kDa subunit, putative / PSI-D, putative (PSAD2) contains Pfam profile PF02531: PsaD; go_component: photosystem I reaction center [goid 0009538]; go_process: photosynthesis [goid 0015979] At1g03140 chr1:000754471 0.0 C/754471-754890,755381-756223 splicing factor Prp18 family protein go_component: spliceosome complex [goid 0005681]; go_function: pre-mRNA splicing factor activity [goid 0008248]; go_process: RNA splicing [goid 0008380] At1g03150 chr1:000756461 0.0 W/756461-756538,756645-756735,757554-757686,757937-758006,758199-758259,758350-758441 GCN5-related N-acetyltransferase (GNAT) family protein GCN5-related N-acetyltransferase (GNAT) familyprotein contains Pfam profile PF00583: acetyltransferase, GNAT family; go_function: N-acetyltransferase activity [goid 0008080]; go_process: metabolism [goid 0008152] At1g03160 chr1:000761321 0.0 W/761321-761810,761886-762391,762510-762578,763013-763210,763299-763430,763980-764066,764157-764603 GTP-binding protein-related contains TIGRFAM TIGR00231: small GTP-binding protein domain; similar to mitofusin 1 precursor (GI:12744896) [Homo sapiens] At1g03170 chr1:000769805 0.0 W/769805-770527 expressed protein At1g03180 chr1:000773549 0.0 W/773549-773691,774096-774153,774231-774539,774652-774700,774785-774879,774968-775141 hypothetical protein At1g03190 chr1:000775822 0.0 W/775822-776355,776482-776762,777155-777237,777336-777739,777872-778065,778153-778333,778486-778610,778807-778896,779002-779080,779174-779250,779538-779646,779744-779863 DNA repair protein / transcription factor protein (UVH6) DNA repair protein / transcription factorprotein (UVH6) go_process: response to heat [goid 0009408]; go_process: response to UV [goid 0009411] At1g03200 chr1:000780755 0.0 W/780755-780836,781081-781124 expressed protein At1g03210 chr1:000782948 0.0 W/782948-783175,783318-783596,783681-783842,783943-784026,784133-784240 phenazine biosynthesis PhzC/PhzF family protein At1g03220 chr1:000787143 0.0 W/787143-788444 extracellular dermal glycoprotein, putative / EDGP, putative At1g03230 chr1:000790110 0.0 W/790110-791414 extracellular dermal glycoprotein, putative / EDGP, putative At1g03240 chr1:000792418 0.0 C/792418-792461,792754-792838 hypothetical protein At1g03250 chr1:000793576 0.0 C/793576-793731,793829-793930,794022-794180,794328-794410,794542-794650,794899-794969,795102-795159 expressed protein At1g03260 chr1:000795678 0.0 C/795678-795856,795988-796018,796536-796628,796776-796892,797041-797127,797313-797411,797546-797600,797728-797789,798001-798102 expressed protein At1g03270 chr1:000799191 0.0 W/799191-799431,799641-799717,799827-799910,799999-800112,800382-800465,800629-800700,800972-801039,801185-801272,801356-801429,801517-801889,802012-802058,802163-802223,802320-802436 expressed protein At1g03280 chr1:000803635 0.0 W/803635-803687,803835-803957,804247-804367,804739-804852,804961-805070,805167-805350,805458-805652,805860-806087,806196-806409,806661-806758 transcription initiation factor IIE (TFIIE) alpha subunit family protein / general transcription factor TFIIE family protein transcription initiation factor IIE (TFIIE)alpha subunit family protein / general transcription go_component: transcription factor TFIIE complex [goid 0005673]; go_function: transcription initiation factor activity [goid 0016986] At1g03290 chr1:000807970 0.0 W/807970-808017,808229-808394,808532-809214,809409-809582,809672-809788,809911-810090,810188-810234,810380-810680 expressed protein At1g03290 chr1:000807970 0.0 W/807970-808017,808229-808394,808532-809214,809409-809582,809672-809788,809911-810090,810188-810234,810380-810690 expressed protein At1g03300 chr1:000811033 0.0 C/811033-811988,812030-813086 agenet domain-containing protein At1g03310 chr1:000813975 0.0 W/813975-816623 isoamylase, putative / starch debranching enzyme, putative isoamylase, putative / starch debranchingenzyme, putative contains Pfam profiles PF00128: Alpha amylase catalytic domain, PF02922: Isoamylase N-terminal domain; ESTs gb|H36690, gb|AA712462, gb|AA651230 and gb|N95932 come from this gene; go_function: alpha-amylase activity [goid 0004556]; go_process: carbohydrate metabolism [goid 0005975] At1g03320 chr1:000817027 0.0 W/817027-817096,817175-817767 hypothetical protein At1g03330 chr1:000818161 0.0 C/818161-818280,818920-819078,819295-819297 small nuclear ribonucleoprotein D, putative / snRNP core SM-like protein, putative / U6 snRNA-associated Sm-like protein, putative small nuclear ribonucleoprotein D, putative /snRNP core SM-like protein, putative / U6 snRNA-associated go_component: nucleus [goid 0005634]; go_component: small nucleolar ribonucleoprotein complex [goid 0005732]; go_function: pre-mRNA splicing factor activity [goid 0008248] At1g03340 chr1:000819712 0.0 W/819712-819783,819897-820077,820159-820501,820595-820666,820738-821227 expressed protein At1g03350 chr1:000822834 0.0 C/822834-824246 BSD domain-containing protein At1g03360 chr1:000824653 0.0 W/824653-824813,824891-824992,825102-825147,825253-825342,825422-825487,825587-825655,825745-826179 exonuclease family protein go_function: exonuclease activity [goid 0004527] At1g03370 chr1:000827182 0.0 W/827182-829182,829721-830187,830958-831313,831420-832640,832753-832935,833084-833367,833415-833570,833694-833956,834254-834419,834514-834996 C2 domain-containing protein / GRAM domain-containing protein C2 domain-containing protein / GRAMdomain-containing protein contains PF02893: GRAM domain; similar to Chain A, Crystal Structure Of Synaptotagmin Iii C2aC2B Length(GI:6980525); similar to Synaptotagmin III (SytIII) (Swiss-Prot:P40748) [Rattus norvegicus] At1g03370 chr1:000827182 0.0 W/827182-829182,829721-830187,830958-831313,831420-832640,832753-832935,833084-833367,833415-833570,833694-833956,834254-834419,834514-835361 C2 domain-containing protein / GRAM domain-containing protein C2 domain-containing protein / GRAMdomain-containing protein contains PF02893: GRAM domain; similar to Chain A, Crystal Structure Of Synaptotagmin Iii C2aC2B Length(GI:6980525); similar to Synaptotagmin III (SytIII) (Swiss-Prot:P40748) [Rattus norvegicus] At1g03380 chr1:000836155 0.0 W/836155-836328,836769-837233,837471-837908,838069-838313,838497-839226,839311-839468,839677-839804,839919-840361 expressed protein At1g03390 chr1:000841032 0.0 C/841032-842417 transferase family protein At1g03400 chr1:000842894 0.0 C/842894-843145,843230-843551,843676-844157 2-oxoglutarate-dependent dioxygenase, putative similar to ESTs emb|Z34690, gb|T04168, gb|H37738, gb|T76913, gb|T43801, amd gb|T21964; go_function: oxidoreductase activity\, acting on paired donors\, with incorporation or reduction of molecular oxygen\, 2-oxoglutarate as one [goid 0016706]; go_process: ethylene metabolism [goid 0009692] At1g03410 chr1:000844781 0.0 C/844781-845032,845113-845434,845951-846462 2-oxoglutarate-dependent dioxygenase, putative contains Pfam profile PF03171: oxidoreductase, 2OG-Fe(II) oxygenase family; go_function: oxidoreductase activity\, acting on paired donors\, with incorporation or reduction of molecular oxygen\, 2-oxoglutarate as one [goid 0016706]; go_process: ethylene metabolism [goid 0009692] At1g03420 chr1:000847026 0.0 W/847026-847541 expressed protein At1g03430 chr1:000848158 0.0 W/848158-848226,848366-848496,848641-848712,848807-848878,848997-849069,849178-849234 two-component phosphorelay mediator, putative go_function: histidine phosphotransfer kinase activity [goid 0009927]; go_process: two-component signal transduction system (phosphorelay) [goid 0000160] At1g03440 chr1:000852680 0.0 W/852680-853873 leucine-rich repeat family protein go_function: protein binding [goid 0005515]; go_process: signal transduction [goid 0007165] At1g03445 chr1:000854900 0.0 C/854900-854932,855022-855165,855254-855329,855404-855600,855687-855785,855858-855942,856055-856293,856369-856443,856539-856650,856758-856839,857012-857092,857278-857436,857546-857627,857703-857798,857970-858039,858119-858215,858598-858692,858776-858849,859000-859078,859231-859291,859397-859748 kelch repeat-containing protein / serine/threonine phosphoesterase family protein kelch repeat-containing protein /serine/threonine phosphoesterase family protein go_function: protein serine/threonine phosphatase activity [goid 0004722] At1g03457 chr1:000861109 0.0 C/861109-861278,861368-861511,861606-861909,862042-862212,862314-862393,862488-862613,862753-862804,863459-863541,863860-864019 RNA-binding protein, putative contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM); go_function: RNA binding [goid 0003723] At1g03457 chr1:000861109 0.0 C/861109-861278,861368-861511,861606-861909,862042-862212,862314-862393,862488-862640,862753-862804,863459-863541,863860-864019 RNA-binding protein, putative contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM); go_function: RNA binding [goid 0003723] At1g03470 chr1:000866217 0.0 C/866217-866941,867409-867493 kinase interacting family protein At1g03475 chr1:000869458 0.0 C/869458-869553,869659-869783,869876-869963,870145-870228,870314-870408,870497-870572,870652-871176 coproporphyrinogen III oxidase, putative / coproporphyrinogenase, putative / coprogen oxidase, putative coproporphyrinogen III oxidase, putative /coproporphyrinogenase, putative / coprogen oxidase, contains Pfam domain coproporphyrinogen III oxidase, aerobic [PF01218]; go_function: coproporphyrinogen oxidase activity [goid 0004109]; go_process: porphyrin biosynthesis [goid 0006779] At1g03490 chr1:000871875 0.0 W/871875-872276,872293-872394,872473-872730 no apical meristem (NAM) family protein At1g03495 chr1:000873185 0.0 W/873185-874833 pseudo At1g03502 chr1:000875359 0.0 C/875359-875472 unknown At1g03506 chr1:000875519 0.0 C/875519-875605 unknown At1g03510 chr1:000876259 0.0 C/876259-877548 pentatricopeptide (PPR) repeat-containing protein At1g03515 chr1:000877649 0.0 W/877649-877720 tRNA-Asp At1g03520 chr1:000877949 0.0 C/877949-878457,878541-878656,878736-878811,878912-879554 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein glycosyltransferase family 14 protein /core-2/I-branching enzyme family protein go_component: membrane [goid 0016020]; go_function: acetylglucosaminyltransferase activity [goid 0008375]; go_function: transferase activity, transferring glycosyl groups [goid 0016757]; go_process: carbohydrate biosynthesis [goid 0016051] At1g03530 chr1:000880639 0.0 C/880639-881877,881979-882056,882251-882421,882433-883338 expressed protein At1g03540 chr1:000883782 0.0 W/883782-885611 pentatricopeptide (PPR) repeat-containing protein At1g03550 chr1:000885851 0.0 C/885851-885937,886035-886100,886196-886244,886393-886460,886554-886599,886696-886789,886878-886940,887015-887137,887225-887258,887368-887430,887531-887635,887725-887778 secretory carrier membrane protein (SCAMP) family protein secretory carrier membrane protein (SCAMP)family protein go_function: carrier activity [goid 0005386]; go_process: secretory pathway [goid 0045045] At1g03560 chr1:000890428 0.0 C/890428-892410 very similar to regions of Chromosmes 4 and 1, BACs MPA24, T7I23, MUB3, and T1G11 At1g03570 chr1:000892514 0.0 W/892514-892585 tRNA-Gln At1g03580 chr1:000892847 0.0 W/892847-894052 pseudo At1g03590 chr1:000894480 0.0 C/894480-894944,895030-895253,895355-895472,895583-895921,896015-896212 protein phosphatase 2C family protein / PP2C family protein protein phosphatase 2C family protein / PP2Cfamily protein PP2C (GI:3643088) [Mesembryanthemum crystallinum]; contains Pfam PF00481 : Protein phosphatase 2C domain; go_function: protein phosphatase type 2C activity [goid 0015071] At1g03600 chr1:000898915 0.0 W/898915-899439 photosystem II family protein similar to ESTs emb|Z27038, gb|AA451546, emb|Z29876, gb|T45359 and gb|R90316; go_component: thylakoid lumen (sensu Viridiplantae) [goid 0009543]; go_component: photosystem II (sensu Viridiplantae) [goid 0030095] At1g03610 chr1:000901303 0.0 W/901303-901395,901485-901705,901890-902076,902169-902346,902424-902671 expressed protein At1g03620 chr1:000904318 0.0 C/904318-904419,904520-904614,904727-904774,904880-905003,905118-905172,905267-905382,905496-905564,905666-905783,905942-906012 phagocytosis and cell motility protein ELMO1-related phagocytosis and cell motility proteinELMO1-related At1g03630 chr1:000907698 0.0 W/907698-907754,907848-907946,908032-908569,908654-909009,909089-909244 protochlorophyllide reductase C, chloroplast / PCR C / NADPH-protochlorophyllide oxidoreductase C (PORC) protochlorophyllide reductase C, chloroplast /PCR C / NADPH-protochlorophyllide oxidoreductase C (PORC) go_component: chloroplast [goid 0009507]; go_function: oxidoreductase activity [goid 0016491]; go_function: protochlorophyllide reductase activity [goid 0016630]; go_process: chlorophyll biosynthesis [goid 0015995] At1g03640 chr1:000909810 0.0 C/909810-909882 tRNA-Phe At1g03650 chr1:000910248 0.0 C/910248-910480,910859-911102 GCN5-related N-acetyltransferase (GNAT) family protein GCN5-related N-acetyltransferase (GNAT) familyprotein contains Pfam profile PF00583: acetyltransferase, GNAT family; go_function: N-acetyltransferase activity [goid 0008080]; go_process: metabolism [goid 0008152] At1g03660 chr1:000911435 0.0 C/911435-911758 expressed protein At1g03670 chr1:000914221 0.0 C/914221-914838,914908-915455,915537-916221 ankyrin repeat family protein At1g03680 chr1:000916989 0.0 C/916989-917302,917639-917864 thioredoxin M-type 1, chloroplast (TRX-M1) similar to ESTs gb|T13714, gb|H76398, gb|N37762, gb|AA042639, gb|T21104, emb|Z30901; go_function: thiol-disulfide exchange intermediate activity [goid 0030508] At1g03687 chr1:000918401 0.0 W/918401-918601,918868-919008,919096-919188,919267-919393,919503-919609,919737-919817,919913-919995,920087-920306 DTW domain-containing protein At1g03687 chr1:000918401 0.0 W/918401-918601,918868-919008,919096-919188,919267-919393,919503-919609,919737-919817,919913-919999 DTW domain-containing protein At1g03700 chr1:000921038 0.0 W/921038-921195,921299-921401,921611-921844 integral membrane family protein contains Pfam PF04535 : Domain of unknown function (DUF588) At1g03710 chr1:000923492 0.0 W/923492-923755,923828-923977,924093-924287 expressed protein At1g03720 chr1:000924996 0.0 C/924996-925208,925279-925446,925551-925780,926160-926373 cathepsin-related At1g03730 chr1:000931017 0.0 C/931017-931520 expressed protein At1g03740 chr1:000934055 0.0 W/934055-934708,934785-935069,935164-935481,935570-935797,935882-936025 protein kinase family protein go_function: kinase activity [goid 0016301] At1g03743 chr1:000937206 0.0 C/937206-937286 unknown At1g03746 chr1:000937400 0.0 C/937400-937484 unknown At1g03750 chr1:000937919 0.0 W/937919-938308,938423-938529,938633-939799,939875-940001,940091-940366,940452-940677,940772-941067 helicase, putative At1g03760 chr1:000941210 0.0 C/941210-941266,941365-941430,941536-941571,941693-941793,941914-941947,942030-942104,942186-942566,942652-942819,942979-943038,943122-943319 prefoldin subunit family protein contains Pfam profile PF02996: Prefoldin subunit; go_component: prefoldin complex [goid 0016272]; go_function: chaperone activity [goid 0003754]; go_process: protein folding [goid 0006457] At1g03770 chr1:000944771 0.0 W/944771-944981,945116-945167,945471-945529,945779-945860,945951-946071,946168-946209,946308-946811,947122-947334 zinc finger (C3HC4-type RING finger) family protein zinc finger (C3HC4-type RING finger) familyprotein At1g03780 chr1:000948063 0.0 C/948063-948342,948428-948639,948696-948815,949075-949206,949296-949451,949540-949620,949882-950124,950197-950310,950403-950499,950581-950793,950880-951040,951125-951210,951527-951695 targeting protein-related similar to Restricted expression proliferation associated protein 100 (p100) (Differentially expressed in lung cells 2) (DIL-2) (Targeting protein for Xklp2) (C20orf1 protein) (C20orf2 protein) (Protein FLS353)(SP:Q9ULW0) {Homo sapiens} At1g03790 chr1:000954588 0.0 W/954588-955769 zinc finger (CCCH-type) family protein go_function: nucleic acid binding [goid 0003676]; go_function: transcription factor activity [goid 0003700] At1g03800 chr1:000957260 0.0 C/957260-957997 ERF domain protein 10 (ERF10) At1g03810 chr1:000958758 0.0 W/958758-959007,959427-959608 DNA-binding protein-related At1g03820 chr1:000960007 0.0 C/960007-960675 expressed protein AGP (GI:1087015) {Pyrus communis}; similar to Protein E6. (SP:Q01197) {Gossypium hirsutum} At1g03830 chr1:000962127 0.0 C/962127-963320,963468-963545,963638-964190,964294-964379,964503-964625,964738-964872,964951-965040,965123-965308,965452-965505,965598-965735,965995-966156,966445-966621 guanylate-binding family protein At1g03840 chr1:000967595 0.0 C/967595-968567,969314-969710,969907-970057 zinc finger (C2H2 type) family protein go_function: nucleic acid binding [goid 0003676]; go_function: transcription factor activity [goid 0003700]; go_function: zinc ion binding [goid 0008270] At1g03850 chr1:000977232 0.0 C/977232-977684 glutaredoxin family protein go_function: electron transporter activity [goid 0005489]; go_function: thiol-disulfide exchange intermediate activity [goid 0030508]; go_process: electron transport [goid 0006118] At1g03860 chr1:000979610 0.0 C/979610-979798,979890-980102,980184-980354,980777-980869 prohibitin, putative contains Pfam profile PF01145: SPFH domain / Band 7 family At1g03860 chr1:000979610 0.0 C/979610-979798,979890-980102,980184-980354,980777-980893,980986-981156 prohibitin, putative contains Pfam profile PF01145: SPFH domain / Band 7 family At1g03870 chr1:000982624 0.0 C/982624-983367 fasciclin-like arabinogalactan-protein (FLA9) At1g03880 chr1:000985785 0.0 W/985785-986067,986278-986540,986853-987281,987523-987915 12S seed storage protein (CRB) contains Pfam profile PF00190 Cupin and Prosite 11-S plant seed storage proteins signature PS00305; go_function: nutrient reservoir activity [goid 0045735] At1g03890 chr1:000989249 0.0 W/989249-989549,989652-989917,990048-990458,990530-990907 cupin family protein contains Pfam profile PF00190 Cupin; Location of ESTs YAY049-3' end, gb|Z26364 and YAY049-5' end, gb|Z26363; go_function: nutrient reservoir activity [goid 0045735] At1g03900 chr1:000991251 0.0 W/991251-991745,992442-992690,992777-992851 expressed protein At1g03905 chr1:000993477 0.0 W/993477-993630,994045-994205,994353-994404,994495-994631,994827-994913,995312-995593 ABC transporter family protein At1g03910 chr1:000996431 0.0 W/996431-996733,996847-996938,997176-997275,997417-997488,997603-997665,997754-997894,998419-998514,998732-999016,999108-999410,999503-999679,999759-1000025,1000111-1000230 expressed protein At1g03920 chr1:001001472 0.0 W/1001472-1001746,1001808-1002066,1002142-1002383,1002470-1002686,1002782-1002861,1002947-1003031,1003136-1003267,1003388-1003501,1003606-1003653,1003809-1003893,1003970-1004026,1004124-1004239 protein kinase, putative go_function: kinase activity [goid 0016301] At1g03930 chr1:001005438 0.0 W/1005438-1005513,1005611-1005651,1005745-1005814,1005925-1006073,1006175-1006270,1006427-1006497,1006580-1006641,1006733-1006796,1006916-1007000,1007080-1007206,1007289-1007374,1007458-1007524,1007601-1007731,1007827-1008117 protein kinase (ADK1) supported by cDNA gi:18700076 and gi:1216483. Note: differences between cDNAs in the 11th exon, possibly due to errors or alternative splicing; go_function: protein threonine/tyrosine kinase activity [goid 0004712]; go_function: kinase activity [goid 0016301] At1g03935 chr1:001008809 0.0 W/1008809-1008895 unknown At1g03940 chr1:001009541 0.0 C/1009541-1011055 transferase family protein contains Pfam profile PF02458 transferase family; go_function: transferase activity [goid 0016740] At1g03950 chr1:001011387 0.0 C/1011387-1011432,1011501-1011556,1011653-1011688,1011777-1011857,1011941-1012012,1012164-1012235,1012334-1012438,1012508-1012558,1012645-1012679,1012867-1012911,1013178-1013211 SNF7 family protein At1g03960 chr1:001014823 0.0 W/1014823-1014871,1014950-1015049,1015198-1015303,1015427-1015517,1015683-1015824,1016078-1016225,1016339-1016448,1016794-1016950,1017057-1017182,1017331-1017471 calcium-binding EF hand family protein go_function: calcium ion binding [goid 0005509] At1g03970 chr1:001018099 0.0 W/1018099-1019207 G-box binding factor 4 (GBF4) At1g03980 chr1:001018106 0.0 C/1018106-1019393,1019603-1019778,1019905-1020091,1020186-1020413,1020512-1020563,1020654-1020817,1020981-1021219,1021286-1021442,1021799-1022107 phytochelatin synthase 2 (PCS2) At1g03970 chr1:001018236 0.0 W/1018236-1019048 go_component: nucleus [goid 0005634]; go_function: DNA binding [goid 0003677]; go_function: transcription factor activity [goid 0003700] At1g03980 chr1:001019310 0.0 C/1019310-1019393,1019603-1019778,1019905-1020091,1020186-1020413,1020512-1020563,1020654-1020817,1020981-1021219,1021286-1021442,1021799-1021870 go_function: glutathione gamma-glutamylcysteinyltransferase activity [goid 0016756]; go_process: phytochelatin biosynthesis [goid 0046938] At1g03990 chr1:001024846 0.0 W/1024846-1025094,1025292-1025567,1025864-1027615 alcohol oxidase-related At1g04000 chr1:001028414 0.0 C/1028414-1028872 expressed protein At1g04010 chr1:001032005 0.0 C/1032005-1032179,1032239-1032438,1032581-1032652,1032807-1032858,1033186-1033280,1033437-1033536,1033815-1034022,1034121-1034337,1034701-1034777,1034885-1035054,1035139-1035283,1035382-1035517,1035885-1036127 lecithin:cholesterol acyltransferase family protein / LACT family protein lecithin:cholesterol acyltransferase familyprotein / LACT family protein contains Pfam profile PF02450: Lecithin:cholesterol acyltransferase (phosphatidylcholine-sterol acyltransferase); go_function: phosphatidylcholine-sterol O-acyltransferase activity [goid 0004607]; go_process: lipid metabolism [goid 0006629] At1g04020 chr1:001036609 0.0 W/1036609-1036691,1036796-1036849,1036943-1037013,1037088-1037440,1037530-1037745,1037920-1038174,1038275-1038375,1038518-1038704,1038800-1038897,1038994-1039084,1039223-1039388,1039487-1039605,1039694-1040044 zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein zinc finger (C3HC4-type RING finger) familyprotein / BRCT domain-containing protein go_component: intracellular [goid 0005622]; go_function: transcription coactivator activity [goid 0003713] At1g04020 chr1:001036609 0.0 W/1036609-1036691,1036796-1036849,1036943-1037013,1037088-1037440,1037530-1037745,1037923-1038174,1038275-1038375,1038518-1038704,1038800-1038897,1038994-1039084,1039223-1039388,1039487-1039605,1039694-1040044 zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein zinc finger (C3HC4-type RING finger) familyprotein / BRCT domain-containing protein go_component: intracellular [goid 0005622]; go_function: transcription coactivator activity [goid 0003713] At1g04030 chr1:001040517 0.0 W/1040517-1040552,1040873-1040973,1041048-1042092,1042238-1042312 expressed protein At1g04030 chr1:001040517 0.0 W/1040517-1040552,1040873-1040973,1041048-1042092,1042238-1042314,1042567-1042891 expressed protein At1g04040 chr1:001042563 0.0 C/1042563-1042740,1042953-1043162,1043391-1043818 acid phosphatase class B family protein contains Pfam profile PF03767: HAD superfamily (subfamily IIIB) phosphatase; supporting cDNA gi|13926197|gb|AF370572.1|AF370572; go_function: acid phosphatase activity [goid 0003993] At1g04050 chr1:001045966 0.0 C/1045966-1045994,1046098-1046194,1046328-1046378,1046469-1046535,1046623-1046876,1046986-1048004,1048151-1048421,1048498-1048602 SET domain-containing protein / suppressor of variegation related 1 (SUVR1) SET domain-containing protein / suppressor ofvariegation related 1 (SUVR1) contains Pfam profiles PF00856: SET domain, PF05033: Pre-SET motif; identical to cDNA trithorax 3 (ATX3) partial cds GI:15217142 At1g04070 chr1:001050831 0.0 C/1050831-1051115 expressed protein go_component: mitochondrial outer membrane translocase complex [goid 0005742]; go_function: protein translocase activity [goid 0015450]; go_process: mitochondrial translocation [goid 0006628] At1g04080 chr1:001051802 0.0 W/1051802-1052036,1052159-1052268,1052545-1052774,1053326-1053493,1053806-1054199,1054662-1054805,1054935-1055087,1055173-1055289,1055477-1055707,1055797-1056102,1056186-1056287,1056433-1056549 hydroxyproline-rich glycoprotein family protein At1g04090 chr1:001057224 0.0 W/1057224-1057329,1057634-1059246 expressed protein At1g04100 chr1:001059808 0.0 W/1059808-1060079,1060323-1060633,1060731-1060863,1060956-1061025 auxin-responsive protein / indoleacetic acid-induced protein 10 (IAA10) auxin-responsive protein / indoleaceticacid-induced protein 10 (IAA10) go_function: transcription factor activity [goid 0003700] At1g04110 chr1:001061456 0.0 C/1061456-1063783 subtilase family protein At1g04120 chr1:001064847 0.0 C/1064847-1064959,1065054-1065293,1065379-1065442,1065549-1065854,1065934-1066148,1066230-1066524,1066606-1066770,1066851-1067549,1067762-1067848,1067926-1068246,1068356-1070395 ABC transporter family protein go_function: ATP-binding cassette (ABC) transporter activity [goid 0004009] At1g04130 chr1:001073464 0.0 W/1073464-1073568,1073648-1073860,1073939-1074130,1074224-1074426,1074531-1074609,1074897-1075020,1075107-1075199,1075300-1075373 tetratricopeptide repeat (TPR)-containing protein tetratricopeptide repeat (TPR)-containingprotein Contains similarity to serine/threonine protein phosphatase gb|X83099 from S. cerevisiae, SP|O95801 Tetratricopeptide repeat protein 4 Homo sapiens; contains Pfam profile PF00515: TPR Domain At1g04140 chr1:001075991 0.0 C/1075991-1076009,1076118-1076224,1076310-1076423,1076565-1076678,1076871-1076931,1077035-1077235,1077340-1078352,1078426-1078551,1078681-1078748,1078837-1078945,1079245-1079329,1079409-1079525,1079620-1079778,1080232-1080320 transducin family protein / WD-40 repeat family protein transducin family protein / WD-40 repeat familyprotein similar to neural cell adhesion molecule 2, large isoform precursor gb|M76710 from Xenopus laevis, and beta transducin from S. cerevisiae gb|Q05946. ESTs gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101, gb|H36304, and gb|N65606 come from; go_function: nucleotide binding [goid 0000166] At1g04150 chr1:001081207 0.0 C/1081207-1084245 C2 domain-containing protein At1g04160 chr1:001086494 0.0 W/1086494-1086496,1087113-1087241,1087369-1087512,1087656-1087801,1087889-1088048,1088250-1088308,1088410-1088569,1088663-1088812,1088894-1089030,1089120-1089266,1089392-1089493,1089911-1089968,1090060-1090161,1090405-1090442,1090566-1090692,1090814-1090981,1091073-1091204,1091303-1091412,1091501-1091561,1091655-1091832,1091925-1092130,1092301-1092420,1092571-1092669,1092775-1092987,1093108-1093247,1093335-1093449,1093540-1093584,1093691-1093741,1093824-1093994,1094311-1094463,1094550-1094741,1094900-1095028,1095106-1095176,1095346-1095442,1095517-1095573,1095664-1095720,1095803-1095966,1096034-1096145 myosin family protein At1g04170 chr1:001097422 0.0 W/1097422-1097530,1097618-1097679,1097799-1097911,1097998-1098100,1098378-1098605,1098717-1098935,1099036-1099296,1099399-1099701 eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative eukaryotic translation initiation factor 2subunit 3, putative / eIF2S3, putative / eIF-2-gamma, go_function: translation initiation factor activity [goid 0003743]; go_function: translation factor activity, nucleic acid binding [goid 0008135] At1g04180 chr1:001104622 0.0 W/1104622-1105287,1105388-1105987 flavin-containing monooxygenase family protein / FMO family protein flavin-containing monooxygenase family protein /FMO family protein At1g04190 chr1:001106616 0.0 C/1106616-1106691,1106856-1106989,1107069-1107188,1107267-1107446,1107555-1107728,1107819-1107869,1107984-1108077,1108399-1108556 tetratricopeptide repeat (TPR)-containing protein tetratricopeptide repeat (TPR)-containingprotein contains Pfam profile PF00515 TPR Domain; EST gb|Z47802 and gb|Z48402 come from this gene At1g04200 chr1:001109675 0.0 W/1109675-1109864,1109983-1110222,1110299-1110362,1110456-1110585,1110677-1110818,1110982-1111227,1111304-1111391,1111522-1111624,1111790-1111918,1112000-1112113,1112290-1112408,1112499-1112589,1112688-1112780,1112860-1112949,1113071-1113190,1113300-1113391,1113506-1113563,1113785-1113874 expressed protein At1g04210 chr1:001114695 0.0 W/1114695-1115191,1115556-1115820,1115937-1116099,1116225-1116960,1117052-1117481,1117574-1117755,1117988-1118144,1118222-1118446,1118530-1118880,1118967-1119068,1119152-1119382 leucine-rich repeat family protein / protein kinase family protein leucine-rich repeat family protein / proteinkinase family protein go_function: protein kinase activity [goid 0004672]; go_function: protein binding [goid 0005515] At1g04220 chr1:001119852 0.0 C/1119852-1120670,1121715-1122482 beta-ketoacyl-CoA synthase, putative go_component: integral to membrane [goid 0016021]; go_function: acyltransferase activity [goid 0008415]; go_process: very-long-chain fatty acid metabolism [goid 0000038]; go_process: fatty acid elongation [goid 0030497] At1g04230 chr1:001125575 0.0 W/1125575-1125727,1125994-1126123,1126232-1126362,1126534-1126672,1126847-1126961,1127192-1127255,1127433-1127672,1127822-1127827 expressed protein At1g04240 chr1:001128563 0.0 C/1128563-1128638,1128743-1129051,1129134-1129318 auxin-responsive protein / indoleacetic acid-induced protein 3 (IAA3) auxin-responsive protein / indoleaceticacid-induced protein 3 (IAA3) EST gb|T04296 comes from this gene; go_function: transcription factor activity [goid 0003700]; go_process: response to auxin stimulus [goid 0009733] At1g04250 chr1:001136381 0.0 W/1136381-1136619,1136933-1137144,1137459-1137597,1137739-1137800,1138302-1138339 auxin-responsive protein / indoleacetic acid-induced protein 17 (IAA17) auxin-responsive protein / indoleaceticacid-induced protein 17 (IAA17) ESTs gb|H36782 and gb|F14074 come from this gene; go_function: transcription factor activity [goid 0003700]; go_process: response to auxin stimulus [goid 0009733]; go_process: auxin mediated signaling [goid 0009734] At1g04260 chr1:001140748 0.0 C/1140748-1141296 prenylated rab acceptor (PRA1) family protein contains Pfam profile PF03208: Prenylated rab acceptor (PRA1); go_component: cytoplasm [goid 0005737]; go_function: protein binding [goid 0005515]; go_process: viral spread within host [goid 0046739] At1g04270 chr1:001141851 0.0 C/1141851-1142099,1142575-1142632,1142720-1142868,1142957-1142959 40S ribosomal protein S15 (RPS15A) go_component: cytosolic small ribosomal subunit (sensu Eukarya) [goid 0005843]; go_function: structural constituent of ribosome [goid 0003735]; go_process: protein biosynthesis [goid 0006412] At1g04280 chr1:001143642 0.0 C/1143642-1143887,1143979-1144123,1144233-1144555,1144654-1144783,1144875-1145093,1145294-1145358,1145496-1145719,1146140-1146230 expressed protein At1g04290 chr1:001147720 0.0 C/1147720-1147863,1147947-1148090,1148172-1148351 thioesterase family protein EST gb|T45093 comes from this gene; go_function: acyl-CoA thioesterase activity [goid 0016291]; go_function: hydrolase activity, acting on ester bonds [goid 0016788] At1g04300 chr1:001148817 0.0 C/1148817-1149995,1150117-1150318,1150391-1150881,1150967-1151117,1151211-1151323,1151502-1151850,1152316-1152474,1152676-1152808,1152878-1152970,1153035-1153323 meprin and TRAF homology domain-containing protein / MATH domain-containing protein meprin and TRAF homology domain-containingprotein / MATH domain-containing protein ontains Pfam PF00917: Meprin And TRAF-Homology (MATH) domain At1g04310 chr1:001155115 0.0 C/1155115-1155276,1155349-1157124 ethylene receptor-related contains Pfam profiles PF01590: GAF domain, PF00512: His Kinase A (phosphoacceptor) domain; go_function: protein-histidine kinase activity [goid 0004673] At1g04320 chr1:001159022 0.0 W/1159022-1159092 tRNA-Gly At1g04330 chr1:001161583 0.0 C/1161583-1161885 expressed protein At1g04340 chr1:001163344 0.0 C/1163344-1163451,1163605-1163703,1163790-1163879,1163971-1164085,1164669-1164736 lesion inducing protein-related At1g04350 chr1:001165295 0.0 W/1165295-1165800,1165872-1166193,1166283-1166537 2-oxoglutarate-dependent dioxygenase, putative EST gb|T76913 comes from this gene; go_function: oxidoreductase activity\, acting on paired donors\, with incorporation or reduction of molecular oxygen\, 2-oxoglutarate as one [goid 0016706]; go_process: ethylene metabolism [goid 0009692] At1g04360 chr1:001167506 0.0 C/1167506-1168651 zinc finger (C3HC4-type RING finger) family protein go_function: protein binding [goid 0005515]; go_function: zinc ion binding [goid 0008270] At1g04370 chr1:001175176 0.0 W/1175176-1175577 ethylene-responsive factor, putative At1g04380 chr1:001177141 0.0 C/1177141-1177392,1177525-1177846,1177920-1178383 2-oxoglutarate-dependent dioxygenase, putative go_function: oxidoreductase activity\, acting on paired donors\, with incorporation or reduction of molecular oxygen\, 2-oxoglutarate as one [goid 0016706]; go_process: ethylene metabolism [goid 0009692] At1g04390 chr1:001179677 0.0 C/1179677-1180109,1180478-1180630,1180716-1181480,1181668-1181768,1182080-1182322,1182453-1182586,1182690-1183197,1183301-1183427,1183529-1183614 expressed protein At1g04400 chr1:001185718 0.0 C/1185718-1186305,1186451-1187163,1187259-1187483,1187588-1187900 cryptochrome 2 apoprotein (CRY2) / blue light photoreceptor (PHH1) cryptochrome 2 apoprotein (CRY2) / blue lightphotoreceptor (PHH1) contains Pfam profiles PF03441: FAD binding domain of DNA photolyase and PF00875: deoxyribodipyrimidine photolyase; identical to cDNA Cvi cryptochrome 2 (CRY2) GI:18026275; go_component: nucleus [goid 0005634]; go_function: blue light photoreceptor activity [goid 0009882]; go_process: response to blue light [goid 0009637]; go_process: phototropism [goid 0009638] At1g04410 chr1:001189417 0.0 C/1189417-1189511,1189600-1189711,1189804-1189939,1190029-1190306,1190464-1190639,1190746-1190904,1191224-1191266 malate dehydrogenase, cytosolic, putative contains InterPro entry IPR001236: Lactate/malate dehydrogenase; go_function: malate dehydrogenase activity [goid 0016615] At1g04420 chr1:001191633 0.0 W/1191633-1191857,1191938-1192033,1192213-1192296,1192412-1192572,1192717-1192834,1192924-1193059,1193142-1193320,1193459-1193698 aldo/keto reductase family protein contains Pfam profile PF00248: oxidoreductase, aldo/keto reductase family; go_function: aldo-keto reductase activity [goid 0004033] At1g04430 chr1:001198859 0.0 W/1198859-1199113,1199196-1199360,1199458-1199640,1199709-1200303,1200423-1200535,1200642-1200862,1200961-1201300 dehydration-responsive protein-related contains Pfam profile PF03141: Putative methyltransferase At1g04440 chr1:001202814 0.0 W/1202814-1202889,1202975-1203015,1203103-1203172,1203271-1203419,1203494-1203589,1203697-1203767,1203843-1203904,1204043-1204106,1204181-1204265,1204392-1204518,1204618-1204703,1204794-1204857,1205114-1205250,1205385-1205663 casein kinase, putative contains protein kinase domain, Pfam:PF00069; go_function: casein kinase I activity [goid 0004681]; go_function: kinase activity [goid 0016301] At1g04445 chr1:001207343 0.0 W/1207343-1207861 zinc finger (C2H2 type) family protein At1g04450 chr1:001209005 0.0 W/1209005-1209059,1209158-1209258,1209346-1209852 p21-rho-binding domain-containing protein At1g04470 chr1:001211176 0.0 C/1211176-1212143,1212221-1212407,1212485-1213157,1213229-1213896,1213979-1214590 expressed protein At1g04480 chr1:001216109 0.0 W/1216109-1216121,1216243-1216527,1217132-1217256 60S ribosomal protein L23 (RPL23A) go_component: ribosome [goid 0005840]; go_function: structural constituent of ribosome [goid 0003735]; go_process: protein biosynthesis [goid 0006412] At1g04490 chr1:001218019 0.0 C/1218019-1218180,1218281-1219324 expressed protein At1g04500 chr1:001221756 0.0 C/1221756-1221863,1221955-1222080,1222173-1222364,1222488-1223180,1224193-1224234 zinc finger CONSTANS-related At1g04510 chr1:001226748 0.0 W/1226748-1226760,1226851-1226936,1227086-1227157,1227246-1227308,1227579-1227665,1227815-1227956,1228045-1228166,1228330-1228446,1228705-1228800,1228896-1228955,1229053-1229127,1229232-1229336,1229503-1229622,1229716-1229793,1229892-1229976,1230064-1230115,1230302-1230372,1230464-1230591 transducin family protein / WD-40 repeat family protein transducin family protein / WD-40 repeat familyprotein similar to cell cycle control protein cwf8 (SP:O14011) [Schizosaccharomyces pombe (Fission yeast)]; go_function: nucleotide binding [goid 0000166] At1g04520 chr1:001231851 0.0 W/1231851-1232271,1232604-1232990,1233492-1233599,1233779-1233786 33 kDa secretory protein-related At1g04530 chr1:001234455 0.0 C/1234455-1234503,1234603-1234757,1234993-1235107,1235184-1235356,1235454-1235894 expressed protein At1g04540 chr1:001237255 0.0 W/1237255-1239060 C2 domain-containing protein At1g04550 chr1:001240581 0.0 W/1240581-1240783,1241056-1241342,1241424-1241541,1241615-1241676,1241760-1241809 auxin-responsive protein / indoleacetic acid-induced protein 12 (IAA12) auxin-responsive protein / indoleaceticacid-induced protein 12 (IAA12) go_function: transcription factor activity [goid 0003700]; go_process: response to auxin stimulus [goid 0009733]; go_process: embryonic pattern specification [goid 0009880] At1g04550 chr1:001240581 0.0 W/1240581-1240783,1241056-1241374 auxin-responsive protein / indoleacetic acid-induced protein 12 (IAA12) auxin-responsive protein / indoleaceticacid-induced protein 12 (IAA12) go_function: transcription factor activity [goid 0003700]; go_process: response to auxin stimulus [goid 0009733]; go_process: embryonic pattern specification [goid 0009880] At1g04560 chr1:001245069 0.0 W/1245069-1245198,1245291-1245468,1245635-1245887 AWPM-19-like membrane family protein similar to late embryogenesis abundant protein, (Lea) with hydrophobic domain, high pI value (11.6); 15kD protein; putative (GI:310570) {Glycine max} At1g04570 chr1:001246858 0.0 C/1246858-1248002,1248116-1248599 integral membrane transporter family protein contains Pfam PF03092: BT1 family; contains TIGRFAMS TIGR00788: folate/biopterin transporter; similar to hypothetical protein GB:AAD38263; go_component: membrane [goid 0016020]; go_function: transporter activity [goid 0005215]; go_process: transport [goid 0006810] At1g04580 chr1:001252211 0.0 C/1252211-1252440,1252541-1252730,1252826-1252924,1253011-1253106,1253181-1254146,1254219-1254437,1254540-1254749,1254865-1255124,1255276-1256883,1257374-1257509 aldehyde oxidase, putative identical to cDNA putative aldehyde oxidase (AO2) mRNA, partial cds GI:2792305; go_function: aldehyde oxidase activity [goid 0004031]; go_process: abscisic acid biosynthesis [goid 0009688] At1g04590 chr1:001258759 0.0 C/1258759-1258898,1259026-1259218,1259357-1259569,1259727-1259870,1260011-1260124,1260524-1260625,1260745-1260805,1260941-1260977,1261269-1261410 expressed protein At1g04590 chr1:001258759 0.0 C/1258759-1258898,1259026-1259227,1259357-1259569,1259727-1259870,1260011-1260124,1260524-1260625,1260745-1260805,1260941-1260977,1261269-1261410 expressed protein At1g04600 chr1:001262122 0.0 W/1262122-1262124,1262555-1262680,1262896-1263039,1263174-1263319,1263411-1263567,1263680-1263738,1263832-1263991,1264093-1264242,1264309-1264445,1264532-1264678,1264759-1264860,1265158-1265215,1265290-1265391,1265491-1265528,1265613-1265739,1265822-1265992,1266076-1266207,1266313-1266422,1266551-1266611,1266814-1266991,1267075-1267280,1267394-1267513,1267770-1267868,1267995-1268282,1268405-1268557,1268672-1268821,1268939-1269103,1269191-1269330,1269451-1269565,1269644-1269664,1269770-1269847,1269936-1270106,1270271-1270423,1270571-1270747,1270840-1271130,1271198-1271268,1271366-1271465,1271542-1271598,1271677-1271733,1271940-1272020,1272100-1272176,1272261-1272375 myosin, putative At1g04610 chr1:001279523 0.0 W/1279523-1280236,1280399-1280770,1281103-1281330 flavin-containing monooxygenase / FMO (YUCCA3) go_function: monooxygenase activity [goid 0004497]; go_process: auxin biosynthesis [goid 0009851] At1g04620 chr1:001282868 0.0 C/1282868-1282958,1283067-1283161,1283257-1283321,1283482-1283539,1283638-1283707,1283793-1283872,1283968-1283995,1284100-1284161,1284242-1284277,1284355-1284452,1284627-1284689,1284789-1284840,1284925-1285003,1285138-1285179,1285284-1285368,1285515-1285626,1285718-1285802,1285895-1286000,1286410-1286491 coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family coenzyme F420 hydrogenase family /dehydrogenase, beta subunit family similar to Coenzyme F420 hydrogenase beta subunit (SP:Q00391) {Methanobacterium thermoautotrophicum}; go_function: coenzyme F420 hydrogenase activity [goid 0050454] At1g04625 chr1:001288189 0.0 C/1288189-1288952 pseudo At1g04630 chr1:001289920 0.0 C/1289920-1290064,1290151-1290222,1290771-1290985 expressed protein At1g04635 chr1:001291349 0.0 W/1291349-1291804 ribonuclease P family protein / Rpp14 family protein go_function: ribonuclease P activity [goid 0004526]; go_process: tRNA processing [goid 0008033] At1g04640 chr1:001292540 0.0 W/1292540-1293247 biotin/lipoate A/B protein ligase family protein biotin/lipoate A/B protein ligase familyprotein contains Pfam profile PF03099: Biotin/lipoate A/B protein ligase family; go_component: mitochondrion [goid 0005739]; go_function: lipoyltransferase activity [goid 0017118]; go_process: lipoic acid metabolism [goid 0000273] At1g04645 chr1:001293852 0.0 C/1293852-1294238 self-incompatibility protein-related At1g04650 chr1:001294892 0.0 C/1294892-1295499,1295536-1295774,1295940-1297534,1297705-1297854,1297944-1298033,1298121-1298201,1298855-1298902 hypothetical protein At1g04660 chr1:001300667 0.0 C/1300667-1301305 glycine-rich protein At1g04670 chr1:001301984 0.0 W/1301984-1302088,1302160-1302285,1302382-1302531 expressed protein At1g04680 chr1:001304051 0.0 C/1304051-1304278,1304372-1304510,1304620-1304723,1304822-1305464,1306791-1306871,1307679-1307779 pectate lyase family protein go_function: lyase activity [goid 0016829]; go_function: pectate lyase activity [goid 0030570] At1g04690 chr1:001313661 0.0 W/1313661-1314028,1314463-1314658,1314779-1314922,1315040-1315204,1315306-1315419 potassium channel protein, putative contains Pfam profile PF00248: oxidoreductase, aldo/keto reductase family; go_function: potassium channel activity [goid 0005267]; go_process: potassium ion transport [goid 0006813] At1g04700 chr1:001316918 0.0 W/1316918-1318786,1318866-1319186,1319284-1319523,1319604-1319767,1319851-1319998,1320087-1320209,1320285-1320372,1320477-1320652 protein kinase family protein contains Pfam profile: PF00069 Eukaryotic protein kinase domain; go_function: protein kinase activity [goid 0004672]; go_process: protein amino acid phosphorylation [goid 0006468] At1g04700 chr1:001316918 0.0 W/1316918-1318786,1318866-1319186,1319284-1319523,1319604-1319767,1319851-1319998,1320087-1320209,1320285-1320372,1320477-1320918 protein kinase family protein contains Pfam profile: PF00069 Eukaryotic protein kinase domain; go_function: protein kinase activity [goid 0004672]; go_process: protein amino acid phosphorylation [goid 0006468] At1g04710 chr1:001321940 0.0 W/1321940-1322017,1322256-1322320,1322406-1322490,1322572-1322698,1322787-1322885,1322966-1323033,1323131-1323238,1323322-1323399,1323505-1323637,1323731-1323827,1323904-1324027,1324133-1324241,1324307-1324390,1324479-1324555 acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative acetyl-CoA C-acyltransferase, putative /3-ketoacyl-CoA thiolase, putative contains InterPro accession IPR002155: Thiolase; go_function: acetyl-CoA C-acyltransferase activity [goid 0003988] At1g04720 chr1:001324922 0.0 W/1324922-1325006 tRNA-Met At1g04730 chr1:001325384 0.0 C/1325384-1325437,1325589-1325688,1325854-1326143,1326193-1326252,1326339-1326530,1326636-1326814,1327043-1327121,1327224-1327305,1327393-1327490,1327571-1327639,1327836-1327903,1328033-1328127,1328456-1328500,1328721-1328881,1329147-1329212,1329318-1329419,1329558-1329644,1329763-1330035,1330146-1330345,1330473-1330630,1330679-1331085 AAA-type ATPase family protein At1g04750 chr1:001331856 0.0 C/1331856-1331999,1332136-1332198,1332388-1332508,1332588-1332729,1333236-1333425 synaptobrevin family protein go_component: membrane [goid 0016020] At1g04760 chr1:001334759 0.0 W/1334759-1334948,1335331-1335472,1335562-1335682,1335767-1335829,1335923-1336069 synaptobrevin family protein At1g04770 chr1:001336563 0.0 C/1336563-1336985,1337086-1337241,1337343-1337555,1337647-1337766 male sterility MS5 family protein contains Pfam profile PF00515 TPR Domain At1g04780 chr1:001340890 0.0 C/1340890-1341258,1341339-1342964 ankyrin repeat family protein At1g04790 chr1:001345468 0.0 W/1345468-1346240,1346358-1346838,1346941-1347039,1347237-1347437,1347526-1347614,1347704-1347803,1347898-1347996,1348080-1348142 zinc finger (C3HC4-type RING finger) family protein zinc finger (C3HC4-type RING finger) familyprotein go_function: protein binding [goid 0005515]; go_function: zinc ion binding [goid 0008270] At1g04800 chr1:001348634 0.0 C/1348634-1349236 glycine-rich protein At1g04810 chr1:001350303 0.0 W/1350303-1350448,1350832-1350901,1351106-1351211,1351525-1351633,1351712-1351880,1352070-1352530,1352637-1352772,1352875-1353123,1353223-1353443,1353540-1353798,1353920-1354152,1354239-1354737,1354913-1355260 26S proteasome regulatory subunit, putative go_component: proteasome regulatory particle, base subcomplex (sensu Eukarya) [goid 0008540]; go_process: ubiquitin-dependent protein catabolism [goid 0006511] At1g04820 chr1:001356420 0.0 C/1356420-1357073,1357157-1357762,1358173-1358265 tubulin alpha-2/alpha-4 chain (TUA4) go_component: tubulin [goid 0045298]; go_function: structural constituent of cytoskeleton [goid 0005200]; go_process: microtubule-based process [goid 0007017] At1g04830 chr1:001359086 0.0 C/1359086-1359250,1359380-1359496,1359719-1359898,1360224-1360352,1360437-1360535,1360679-1360831,1361074-1361178,1361317-1361409,1361538-1361843 RabGAP/TBC domain-containing protein contains Pfam profile PF00566: TBC domain At1g04840 chr1:001362866 0.0 C/1362866-1363698,1363797-1364961 pentatricopeptide (PPR) repeat-containing protein pentatricopeptide (PPR) repeat-containingprotein At1g04850 chr1:001365310 0.0 C/1365310-1365486,1365611-1365730,1365872-1365949,1366038-1366127,1366217-1366298,1366390-1366457,1366600-1366660,1366806-1366885,1367146-1367222,1367612-1367707,1367789-1367933,1368538-1368705 ubiquitin-associated (UBA)/TS-N domain-containing protein ubiquitin-associated (UBA)/TS-Ndomain-containing protein contains Pfam profile PF00627: UBA/TS-N domain At1g04860 chr1:001369305 0.0 C/1369305-1369545,1369645-1372289 ubiquitin-specific protease 2 (UBP2) go_function: ubiquitin-specific protease activity [goid 0004843] At1g04870 chr1:001373484 0.0 C/1373484-1373660,1373750-1373833,1373916-1374101,1374247-1374436,1374741-1374846,1375028-1375127 protein arginine N-methyltransferase family protein protein arginine N-methyltransferase familyprotein go_function: methyltransferase activity [goid 0008168] At1g04870 chr1:001373484 0.0 C/1373484-1373660,1373750-1373833,1373916-1374101,1374247-1374436,1374741-1374846,1375028-1375220,1375382-1375597 protein arginine N-methyltransferase family protein protein arginine N-methyltransferase familyprotein go_function: methyltransferase activity [goid 0008168] At1g04880 chr1:001376105 0.0 C/1376105-1376524,1376619-1377034,1377138-1377260,1377353-1377509,1377664-1377742,1378112-1378263 high mobility group (HMG1/2) family protein / ARID/BRIGHT DNA-binding domain-containing protein high mobility group (HMG1/2) family protein /ARID/BRIGHT DNA-binding domain-containing protein contains Pfam profiles PF00505: HMG (high mobility group) box, PF01388: ARID/BRIGHT DNA binding domain; go_function: transcription factor activity [goid 0003700] At1g04890 chr1:001381108 0.0 C/1381108-1381164,1381275-1382248,1382350-1382803 hypothetical protein At1g04900 chr1:001383911 0.0 W/1383911-1384039,1384339-1384450,1384658-1384740,1384836-1384901,1385400-1385500,1385646-1385764,1386108-1386148,1386249-1386337,1386409-1386568,1386640-1386756,1387023-1387067,1387202-1387333,1387426-1387560 expressed protein At1g04910 chr1:001388100 0.0 C/1388100-1388714,1388880-1389009,1389203-1389486,1389580-1389703,1389992-1390080,1390263-1390333,1390450-1390528,1390776-1390935,1391066-1391073 expressed protein previously annotated as 'growth regulator protein' based on similarity to axi 1 protein (GB:X80301) (GI:559920) from [Nicotiana tabacum], which, due to scienitific fraud was retracted. Retraction in: Schell J. EMBO J 1999 May 17;18(10):2908. PMID:10400497. At1g04920 chr1:001391673 0.0 C/1391673-1391949,1392055-1392182,1392256-1393191,1393268-1393330,1393479-1393709,1393795-1393926,1394013-1394147,1394230-1394925,1395007-1395070,1395144-1395376,1395462-1395755 sucrose-phosphate synthase, putative go_function: transferase activity, transferring glycosyl groups [goid 0016757]; go_function: sucrose-phosphate synthase activity [goid 0046524]; go_process: sucrose biosynthesis [goid 0005986] At1g04930 chr1:001396545 0.0 C/1396545-1396626,1396785-1396864,1397010-1397123,1397496-1397576,1397667-1397706,1397829-1397881,1398439-1398987 hydroxyproline-rich glycoprotein family protein At1g04940 chr1:001399587 0.0 W/1399587-1399777,1399978-1400034,1400075-1400553,1401065-1401154,1401874-1401977,1402066-1402650 tic20 family protein contains TIGRFAM IGR00994: chloroplast protein import component, Tic20 family; go_component: membrane [goid 0016020] At1g04950 chr1:001403605 0.0 C/1403605-1404111,1404200-1404325,1404616-1404748,1405109-1405233,1405559-1405654,1405742-1405879,1405956-1406056,1406338-1406446,1406540-1406641,1406871-1406957,1407058-1407183 TATA box-binding protein-associated factor (TAF) family protein TATA box-binding protein-associated factor (TAF)family protein go_component: nucleus [goid 0005634]; go_function: transcription initiation factor activity [goid 0016986]; go_process: transcription initiation [goid 0006352] At1g04960 chr1:001408020 0.0 C/1408020-1408199,1408457-1408513,1408616-1408693,1408796-1408828,1408930-1409004,1409351-1409440,1409527-1409628,1409755-1409822,1409951-1410032,1410184-1410317,1410618-1410672 expressed protein At1g04970 chr1:001411923 0.0 W/1411923-1412053,1412159-1412510,1412655-1412903,1413016-1413141,1413239-1413430 lipid-binding serum glycoprotein family protein contains Pfam profile PF02886: LBP / BPI / CETP family, C-terminal domain; go_function: lipid binding [goid 0008289] At1g04980 chr1:001413868 0.0 C/1413868-1414054,1414155-1414301,1414416-1414561,1414645-1414821,1414992-1415091,1415196-1415374,1415449-1415562,1415674-1415832,1415985-1416107 thioredoxin family protein contains Pfam profile PF00085: Thioredoxin; go_function: thiol-disulfide exchange intermediate activity [goid 0030508] At1g04985 chr1:001416562 0.0 C/1416562-1416778,1416868-1416977,1417325-1417389,1417973-1418045,1418174-1418290 expressed protein At1g04990 chr1:001419367 0.0 C/1419367-1419657,1419786-1420031,1420103-1420372,1420447-1420563,1420824-1420880,1420972-1421129,1421378-1421453 zinc finger (CCCH-type) family protein go_function: nucleic acid binding [goid 0003676] At1g05000 chr1:001425659 0.0 W/1425659-1425924,1426015-1426108,1427898-1427955,1428070-1428113,1428207-1428392 tyrosine specific protein phosphatase family protein tyrosine specific protein phosphatase familyprotein go_function: phosphoprotein phosphatase activity [goid 0004721] At1g05010 chr1:001431418 0.0 C/1431418-1431723,1431806-1432139,1432291-1432517,1432590-1432694 1-aminocyclopropane-1-carboxylate oxidase / ACC oxidase / ethylene-forming enzyme (ACO) (EAT1) 1-aminocyclopropane-1-carboxylate oxidase / ACCoxidase / ethylene-forming enzyme (ACO) (EAT1) go_function: 1-aminocyclopropane-1-carboxylate oxidase activity [goid 0009815]; go_process: ethylene biosynthesis [goid 0009693] At1g05020 chr1:001435383 0.0 C/1435383-1437344 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related contains Pfam PF01417: ENTH domain. ENTH (Epsin N-terminal homology) domain; EST gb|W43552 comes from this gene; go_function: binding [goid 0005488] At1g05030 chr1:001438323 0.0 C/1438323-1438514,1438595-1438709,1438810-1438898,1438984-1439057,1439157-1439303,1439501-1439657,1439734-1439827,1439897-1440009,1440233-1440332,1440445-1440645,1441002-1441125,1441216-1441384 hexose transporter, putative contains Pfam profile PF00083: major facilitator superfamily protein; go_component: membrane [goid 0016020]; go_function: sugar porter activity [goid 0005351]; go_function: carbohydrate transporter activity [goid 0015144] At1g05040 chr1:001447757 0.0 C/1447757-1447846,1447953-1448055,1448140-1448447 hypothetical protein At1g05055 chr1:001448912 0.0 C/1448912-1449060,1449236-1449614,1449712-1450173,1450576-1450851 basic transcription factor 2, 44kD subunit-related basic transcription factor 2, 44kDsubunit-related At1g05060 chr1:001451254 0.0 C/1451254-1451361,1451450-1451536,1451664-1451755,1452294-1452418,1452508-1452857 expressed protein At1g05065 chr1:001454968 0.0 C/1454968-1455219 CLE20, putative At1g05070 chr1:001457171 0.0 C/1457171-1457517,1457617-1457640,1458347-1458530 expressed protein At1g05080 chr1:001459090 0.0 W/1459090-1459977,1460062-1460196,1460282-1460578 F-box family protein At1g05085 chr1:001460987 0.0 W/1460987-1461124,1461214-1461263,1461394-1461551,1461641-1461669 hypothetical protein At1g05090 chr1:001463201 0.0 W/1463201-1463527,1463648-1464089,1464147-1465323,1465447-1465621 dentin sialophosphoprotein-related At1g05100 chr1:001469678 0.0 W/1469678-1470697 protein kinase family protein go_function: kinase activity [goid 0016301] At1g05120 chr1:001471623 0.0 C/1471623-1471695,1471779-1471859,1471947-1472035,1472129-1472281,1472372-1472476,1472602-1472832,1473008-1473130,1473237-1473306,1473393-1473478,1473670-1473816,1473920-1473983,1474094-1474167,1474252-1474374,1474595-1475538,1475630-1475722,1476021-1476066 SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein SNF2 domain-containing protein / helicasedomain-containing protein / RING finger domain-containing At1g05135 chr1:001477499 0.0 C/1477499-1478820 pseudo At1g05140 chr1:001482680 0.0 W/1482680-1484005 membrane-associated zinc metalloprotease, putative Similar to Synechocystis hypothetical protein (gb|D90908);contains Pfam PF00595: PDZ domain (Also known as DHR or GLGF); contains TIGRFAM TIGR00054: membrane-associated zinc metalloprotease, putative; go_component: plastid [goid 0009536]; go_function: metalloendopeptidase activity [goid 0004222]; go_process: proteolysis and peptidolysis [goid 0006508] At1g05150 chr1:001484279 0.0 C/1484279-1486705 calcium-binding EF hand family protein contains Pfam profiles PF00036: EF hand, PF00515: TPR Domain; go_function: calcium ion binding [goid 0005509] At1g05160 chr1:001487639 0.0 C/1487639-1487729,1487811-1487935,1488018-1488124,1488219-1488297,1488389-1488478,1488560-1488823,1488908-1489385,1489589-1489827 ent-kaurenoic acid hydroxylase (KAO1) / cytochrome P450 88A3, putative (CYP88A3) ent-kaurenoic acid hydroxylase (KAO1) /cytochrome P450 88A3, putative (CYP88A3) nearly identical to ent-kaurenoic acid hydroxylase (KAO1) GI:13021852 from [Arabidopsis thaliana]; go_function: cytochrome P450 activity [goid 0015034]; go_function: oxygen binding [goid 0019825] At1g05170 chr1:001491459 0.0 C/1491459-1491607,1491939-1492048,1492135-1492260,1492335-1492422,1492527-1492647,1492732-1492804,1492888-1492951,1493028-1493239,1493327-1493391,1493494-1493590,1493821-1493930 galactosyltransferase family protein go_function: transferase activity, transferring hexosyl groups [goid 0016758] At1g05180 chr1:001498113 0.0 C/1498113-1498439,1498565-1498745,1498835-1498918,1499228-1499313,1499455-1499617,1499705-1499778,1499890-1499978,1500155-1500248,1500331-1500484,1500599-1500678,1500803-1500913,1501166-1501189,1501288-1501329,1501424-1501596,1501689-1501771 auxin-resistance protein AXR1 (AXR1) contains Pfam profile PF00899: ThiF family; identical to cDNA ubiquitin activating enzyme E1-related protein (AXR1) GI:304103; go_component: nucleus [goid 0005634]; go_function: ubiquitin-like activating enzyme activity [goid 0008642]; go_process: auxin mediated signaling [goid 0009734] At1g05180 chr1:001498356 0.0 C/1498356-1498439,1498565-1498745,1498835-1498918,1499228-1499313,1499455-1499617,1499705-1499778,1499890-1499978,1500155-1500248,1500331-1500484,1500599-1500678,1500803-1500913,1501166-1501189,1501288-1501329,1501424-1501468 auxin-resistance protein AXR1 (AXR1) contains Pfam profile PF00899: ThiF family; identical to cDNA ubiquitin activating enzyme E1-related protein (AXR1) GI:304103; go_component: nucleus [goid 0005634]; go_function: ubiquitin-like activating enzyme activity [goid 0008642]; go_process: auxin mediated signaling [goid 0009734] At1g05180 chr1:001498356 0.0 C/1498356-1498439,1498565-1498745,1498835-1498918,1499228-1499313,1499455-1499617,1499705-1499778,1499890-1499978,1500155-1500248,1500331-1500484,1500599-1500678,1500803-1500913,1501166-1501329,1501424-1501596,1501689-1501774 auxin-resistance protein AXR1 (AXR1) contains Pfam profile PF00899: ThiF family; identical to cDNA ubiquitin activating enzyme E1-related protein (AXR1) GI:304103; go_component: nucleus [goid 0005634]; go_function: ubiquitin-like activating enzyme activity [goid 0008642]; go_process: auxin mediated signaling [goid 0009734] At1g05190 chr1:001502514 0.0 C/1502514-1502850,1502961-1503260,1503703-1503737 ribosomal protein L6 family protein go_component: large ribosomal subunit [goid 0015934]; go_function: structural constituent of ribosome [goid 0003735]; go_process: protein biosynthesis [goid 0006412] At1g05200 chr1:001505641 0.0 W/1505641-1505992,1506116-1507449,1507528-1507805,1507885-1507916,1508023-1508432,1508528-1509001 glutamate receptor family protein (GLR3.4) go_function: intracellular ligand-gated ion channel activity [goid 0005217]; go_process: calcium ion homeostasis [goid 0006874]; go_process: response to light [goid 0009416] At1g05205 chr1:001509351 0.0 C/1509351-1509435,1509691-1509770,1510138-1510248 expressed protein At1g05210 chr1:001510468 0.0 W/1510468-1510791,1511302-1511484 expressed protein At1g05220 chr1:001511942 0.0 W/1511942-1512262,1512494-1512655 expressed protein At1g05230 chr1:001513387 0.0 C/1513387-1513743,1513824-1513919,1513993-1514264,1514349-1514523,1514589-1514789,1514861-1514962,1515037-1515450,1515820-1516008,1516586-1516703,1516782-1517023 homeobox-leucine zipper family protein / lipid-binding START domain-containing protein homeobox-leucine zipper family protein /lipid-binding START domain-containing protein Strong similarity to Phalaenopsis homeobox protein (gb|U34743); go_component: nucleus [goid 0005634]; go_function: DNA binding [goid 0003677]; go_function: transcription factor activity [goid 0003700]; go_process: regulation of transcription, DNA-dependent [goid 0006355] At1g05240 chr1:001521201 0.0 W/1521201-1521413,1521503-1521688,1521782-1521947,1522034-1522446 peroxidase, putative peroxidase ATP11a [Arabidopsis thaliana] gi|1546688|emb|CAA67334; go_function: peroxidase activity [goid 0004601] At1g05250 chr1:001525923 0.0 C/1525923-1526335,1526422-1526587,1526681-1526866,1526956-1527168 peroxidase, putative peroxidase ATP11a [Arabidopsis thaliana] gi|1546688|emb|CAA67334; go_function: peroxidase activity [goid 0004601] At1g05260 chr1:001529826 0.0 W/1529826-1530038,1530147-1530335,1530429-1530591,1530855-1531270 peroxidase 3 (PER3) (P3) / rare cold-inducible protein (RCI3A) (PRC) peroxidase 3 (PER3) (P3) / rare cold-inducibleprotein (RCI3A) (PRC) go_component: endoplasmic reticulum [goid 0005783]; go_function: peroxidase activity [goid 0004601]; go_process: response to dessication [goid 0009269]; go_process: response to cold [goid 0009409]; go_process: hyperosmotic salinity response [goid 0042538] At1g05270 chr1:001531805 0.0 C/1531805-1531933,1532018-1532129,1532263-1532363,1532483-1532596,1532729-1532833,1532916-1532999,1533351-1533410,1533502-1533549,1533942-1534304 TraB family protein At1g05280 chr1:001535443 0.0 C/1535443-1535472,1535584-1535886,1535974-1536210,1536296-1536707,1537010-1537413 fringe-related protein ringe encodes an extracellular protein that regulates Notch signalling; go_function: transferase activity, transferring glycosyl groups [goid 0016757] At1g05280 chr1:001535443 0.0 C/1535443-1535472,1535584-1535886,1535974-1536210,1536296-1536707,1537010-1537524 fringe-related protein ringe encodes an extracellular protein that regulates Notch signalling; go_function: transferase activity, transferring glycosyl groups [goid 0016757] At1g05290 chr1:001539151 0.0 C/1539151-1539295,1539383-1539693,1539781-1539969,1540081-1540416,1540471-1540545 hypothetical protein At1g05300 chr1:001546160 0.0 C/1546160-1546336,1547082-1547708 metal transporter, putative (ZIP5) similar to zinc transporter protein ZIP1 [Glycine max] gi|15418778|gb|AAK37761; member of the Zinc (Zn2+)-Iron (Fe2+) permease (ZIP) family, PMID:11500563; go_function: cation transporter activity [goid 0008324]; go_function: metal ion transporter activity [goid 0046873]; go_process: cation transport [goid 0006812] At1g05310 chr1:001550614 0.0 C/1550614-1550770,1550860-1551119,1551211-1551417,1551798-1551969,1552048-1552433 pectinesterase family protein At1g05320 chr1:001554855 0.0 W/1554855-1554899,1554990-1556585,1556657-1556866,1556944-1557078,1557175-1557357,1557409-1557639,1557683-1557769 myosin-related ESTs gb|AA042402,gb|ATTS1380 come from this gene At1g05330 chr1:001558169 0.0 W/1558169-1558582 expressed protein At1g05340 chr1:001559078 0.0 C/1559078-1559123,1559375-1559516,1559615-1559645 expressed protein At1g05350 chr1:001560890 0.0 C/1560890-1561038,1561142-1561194,1561312-1561430,1561536-1561622,1561743-1561817,1561952-1562026,1562079-1562120,1562204-1562286,1562368-1562404,1562577-1562732,1563011-1563079,1563164-1563292,1563389-1563502,1563581-1563649,1563924-1564004 thiF family protein At1g05360 chr1:001564815 0.0 W/1564815-1564860,1565151-1565362,1565621-1565699,1565817-1566104,1566341-1566489,1566611-1566727,1566825-1567004,1567098-1567277 expressed protein At1g05370 chr1:001569417 0.0 C/1569417-1570085,1570315-1570378,1570494-1570629,1570987-1571075,1571157-1571203,1571295-1571383,1571948-1572065,1572172-1572279 expressed protein At1g05380 chr1:001578844 0.0 W/1578844-1579194,1579313-1579439,1579533-1579618,1580029-1580267,1580624-1580710,1581183-1581282,1581377-1582189 PHD finger transcription factor, putative go_function: DNA binding [goid 0003677]; go_process: regulation of transcription, DNA-dependent [goid 0006355] At1g05385 chr1:001582746 0.0 C/1582746-1582883,1582964-1583346,1583569-1583647 photosystem II 11 kDa protein-related At1g05390 chr1:001583771 0.0 C/1583771-1583844 tRNA-Asn At1g05400 chr1:001584341 0.0 W/1584341-1584587,1584905-1585059,1585160-1585243 hypothetical protein At1g05410 chr1:001585503 0.0 C/1585503-1585930,1586029-1586089,1586157-1586722,1586907-1587267 expressed protein At1g05420 chr1:001590072 0.0 W/1590072-1590752 ovate protein-related At1g05430 chr1:001594226 0.0 C/1594226-1594429,1594539-1594806,1594922-1595042,1595132-1595185,1595320-1595425,1595674-1595730 expressed protein At1g05440 chr1:001596373 0.0 C/1596373-1596666,1596902-1597051,1597132-1597869 expressed protein At1g05450 chr1:001600003 0.0 W/1600003-1600333,1600506-1600532,1600641-1600700,1600808-1600861,1600940-1601085 protease inhibitor/seed storage/lipid transfer protein (LTP)-related protease inhibitor/seed storage/lipid transferprotein (LTP)-related At1g05450 chr1:001600859 0.0 W/1600859-1600861,1600940-1601089 protease inhibitor/seed storage/lipid transfer protein (LTP)-related protease inhibitor/seed storage/lipid transferprotein (LTP)-related At1g05460 chr1:001601356 0.0 C/1601356-1601961,1602052-1603506,1603622-1603786,1603875-1604657 RNA helicase SDE3 (SDE3) go_function: RNA helicase activity [goid 0003724]; go_process: virus induced gene silencing [goid 0009616] At1g05470 chr1:001608557 0.0 C/1608557-1608779,1608867-1609015,1609098-1609206,1609315-1609508,1609601-1610396,1610485-1610589,1610673-1610760,1611073-1611166 endonuclease/exonuclease/phosphatase family protein endonuclease/exonuclease/phosphatase familyprotein At1g05480 chr1:001618794 0.0 C/1618794-1620560 SNF2 domain-containing protein / helicase domain-containing protein contains PFam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N