At1g01010	chr1:000003760	0	W/3760-3913,3996-4276,4486-4605,4706-5095,5174-5326,5439-5630	gene_syn ANAC001, T25K16.1, T25K16_1 gene ANAC001  product ANAC001; transcription factor go_component cellular component unknown|GO:0008372||ND go_process development|GO:0007275||ISS go_function transcription factor activity|GO:0003700|11118137|ISS note no apical meristem (NAM) family protein, contains Pfam PF02365: No apical meristem (NAM) domain; similar to NAC domain protein NAM GB: AAD17313 GI:4325282 from (Arabidopsis thaliana) protein_id AT1G01010.1p transcript_id AT1G01010.1 protein_id AT1G01010.1p transcript_id AT1G01010.1
At1g01020	chr1:000006915	0	C/6915-7069,7157-7232,7384-7450,7564-7649,7762-7835,7942-7987,8236-8325,8417-8464,8571-8666	gene_syn ARV1, T25K16.2, T25K16_2 gene ARV1  product ARV1 go_component membrane|GO:0016020||ISS go_process biological process unknown|GO:0000004||ND go_function molecular function unknown|GO:0005554||ND note expressed protein, similar to hypothetical protein DDB0188786 [Dictyostelium discoideum] (GB:EAL62332.1); contains InterPro domain Arv1-like protein (InterPro:IPR007290) protein_id AT1G01020.1p transcript_id AT1G01020.1 protein_id AT1G01020.1p transcript_id AT1G01020.1
At1g01020	chr1:000007315	0	C/7315-7450,7564-7649,7762-7835,7942-7987,8236-8325,8417-8464,8571-8666	gene_syn ARV1, T25K16.2, T25K16_2 gene ARV1  product ARV1 go_component membrane|GO:0016020||ISS go_process biological process unknown|GO:0000004||ND go_function molecular function unknown|GO:0005554||ND note similar to transmembrane ARV1-like family protein [Arabidopsis thaliana] (TAIR:At4g01510.1); similar to hypothetical protein DDB0188786 [Dictyostelium discoideum] (GB:EAL62332.1); contains InterPro domain Arv1-like protein (InterPro:IPR007290) protein_id AT1G01020.2p transcript_id AT1G01020.2 protein_id AT1G01020.2p transcript_id AT1G01020.2
At1g01030	chr1:000011864	0	C/11864-12940	gene_syn T25K16.3, T25K16_3  product transcription factor go_component cellular component unknown|GO:0008372||ND go_process regulation of transcription|GO:0045449|11118137|TAS go_function transcription factor activity|GO:0003700|11118137|ISS note DNA-binding protein, putative, similar to DNA-binding proteins from (Arabidopsis thaliana) RAV1 GI:3868857, RAV2 GI:3868859; contains Pfam profile PF02362: B3 DNA binding domain protein_id AT1G01030.1p transcript_id AT1G01030.1 protein_id AT1G01030.1p transcript_id AT1G01030.1
At1g01040	chr1:000023519	0	W/23519-24451,24542-24655,24752-24962,25041-25435,25524-25743,25825-25997,26081-26203,26292-26452,26543-26776,26862-27012,27099-27281,27372-27533,27618-27713,27803-28431,28708-28805,28890-29080,29160-30065,30147-30311,30410-30816,30902-31079	gene_syn ABNORMAL SUSPENSOR 1, ASU1, CAF, CARPEL FACTORY, DICER-LIKE1, EMB60, EMB76, EMBRYO DEFECTIVE 60, EMBRYO DEFECTIVE 76, SHORT INTEGUMENTS 1, SIN1, SUS1, SUSPENSOR 1, T25K16.4, T25K16_4 gene DCL1 function encodes a Dicer homolog. Dicer is a RNA helicase involved in microRNA processing. Mutations in this locus can result in embryo lethality. Embryo shape at seed maturity is globular-elongate. Other mutants convert the floral meristems to an indeterminate state, others yet show defects in ovule development. mRNA is expressed in all shoot tissues.  product DCL1 (DICER-LIKE1); ATP-dependent helicase/ ribonuclease III go_component intracellular|GO:0005622||IEA go_process flower development|GO:0009908|8787738|TAS go_function ribonuclease III activity|GO:0004525||ISS go_function ATP-dependent helicase activity|GO:0008026||ISS go_process cytokinesis|GO:0000910|10556049|IMP go_process RNA processing|GO:0006396|12225663|ISS go_process embryonic pattern specification|GO:0009880|8787738|IMP go_process suspensor development|GO:0010098||IMP go_process vegetative to reproductive phase transition|GO:0010228|8787738|IMP go_process miRNA-mediated gene silencing, mRNA cleavage|GO:0035279|15851028|IMP go_function RNA helicase activity|GO:0003724|12376646|ISS note DEAD/DEAH box helicase carpel factory / CAF, identical to RNA helicase/RNAseIII CAF protein GB:AAF03534 GI:6102610 from (Arabidopsis thaliana) protein_id AT1G01040.1p transcript_id AT1G01040.1 protein_id AT1G01040.1p transcript_id AT1G01040.1
At1g01050	chr1:000031382	0	C/31382-31424,31521-31602,31693-31813,31933-31998,32088-32195,32282-32347,32431-32459,32547-32670	gene_syn T25K16.5, T25K16_5  product inorganic diphosphatase/ magnesium ion binding / pyrophosphatase go_component nucleus|GO:0005634|15610358|IDA go_component cytoplasm|GO:0005737|15610358|IDA go_component membrane|GO:0016020||ISS go_process phosphate metabolism|GO:0006796||IEA go_process metabolism|GO:0008152||ISS go_function magnesium ion binding|GO:0000287||IEA go_function inorganic diphosphatase activity|GO:0004427||IEA go_function pyrophosphatase activity|GO:0016462||ISS note inorganic pyrophosphatase, putative (soluble) / pyrophosphate phospho-hydrolase, putative / PPase, putative, strong similarity to SP|Q43187 Soluble inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho- hydrolase) (PPase) {Solanum tuberosum}; contains Pfam profile PF00719: inorganic pyrophosphatase protein_id AT1G01050.1p transcript_id AT1G01050.1 protein_id AT1G01050.1p transcript_id AT1G01050.1
At1g01060	chr1:000033992	0	C/33992-34327,34401-35474,35567-35647,35730-35963,36624-36685,36810-36921,37023-37061	gene_syn LATE ELONGATED HYPOCOTYL, LHY1, T25K16.6, T25K16_6 gene LHY function myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1  product LHY (LATE ELONGATED HYPOCOTYL); DNA binding / transcription factor go_component nucleus|GO:0005634||IEA go_function DNA binding|GO:0003677||ISS go_function transcription factor activity|GO:0003700|11118137|ISS go_process regulation of circadian rhythm|GO:0042752|12007421|IMP go_function transcription factor activity|GO:0003700|9657154|ISS note myb family transcription factor, contains Pfam profile: PF00249 myb-like DNA-binding domain; identical to cDNA LATE ELONGATED HYPOCOTYL MYB transcription factor GI:3281845 protein_id AT1G01060.2p transcript_id AT1G01060.2 protein_id AT1G01060.2p transcript_id AT1G01060.2
At1g01070	chr1:000038898	0	C/38898-39054,39136-39287,39409-39814,40213-40329,40473-40535,40675-40877	gene_syn T25K16.7, T25K16_7  product unknown protein go_component membrane|GO:0016020||IEA note nodulin MtN21 family protein, similar to MtN21 GI:2598575 (root nodule development) from (Medicago truncatula) protein_id AT1G01070.1p transcript_id AT1G01070.1 protein_id AT1G01070.1p transcript_id AT1G01070.1
At1g01070	chr1:000038898	0	C/38898-39054,39136-39287,39409-39814,40213-40329,40473-40597	gene_syn T25K16.7, T25K16_7  product unknown protein go_component membrane|GO:0016020||IEA note nodulin MtN21 family protein, similar to MtN21 GI:2598575 (root nodule development) from (Medicago truncatula) protein_id AT1G01070.2p transcript_id AT1G01070.2 protein_id AT1G01070.2p transcript_id AT1G01070.2
At1g01080	chr1:000045503	0	C/45503-45559,45646-45954,46044-46145,46373-46789	gene_syn T25K16.19, T25K16_19  product RNA binding / nucleic acid binding go_function nucleic acid binding|GO:0003676||IEA go_function RNA binding|GO:0003723||ISS note similar to 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative [Arabidopsis thaliana] (TAIR:At3g52380.1); similar to unnamed protein product [Nicotiana tabacum] (GB:CAA37879.1); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif) (InterPro:IPR000504) protein_id AT1G01080.2p transcript_id AT1G01080.2 protein_id AT1G01080.2p transcript_id AT1G01080.2
At1g01080	chr1:000045503	0	C/45503-45559,45646-45954,46044-46145,46376-46789	gene_syn T25K16.19, T25K16_19  product RNA binding / nucleic acid binding go_component chloroplast|GO:0009507||IEA go_process biological process unknown|GO:0000004||ND go_function nucleic acid binding|GO:0003676||IEA go_function RNA binding|GO:0003723||ISS note 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative, similar to 33 KDA RIBONUCLEOPROTEIN GB:P19684 from (Nicotiana sylvestris) protein_id AT1G01080.1p transcript_id AT1G01080.1 protein_id AT1G01080.1p transcript_id AT1G01080.1
At1g01090	chr1:000047705	0	C/47705-47982,48075-48852,48936-49166	gene_syn PYRUVATE DEHYDROGENASE E1 ALPHA, T25K16.8, T25K16_8 gene PDH-E1 ALPHA function pyruvate dehydrogenase E1 alpha subunit  product PDH-E1 ALPHA (PYRUVATE DEHYDROGENASE E1 ALPHA); oxidoreductase, acting on the aldehyde or oxo group of donors, disulfide as acceptor / pyruvate dehydrogenase (acetyl-transferring) go_component chloroplast|GO:0009507||IEA go_process metabolism|GO:0008152||IEA go_process metabolism|GO:0008152||ISS go_function pyruvate dehydrogenase (acetyl-transferring) activity|GO:0004739||ISS go_function oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor|GO:0016624||IEA note pyruvate dehydrogenase E1 component alpha subunit, chloroplast, identical to pyruvate dehydrogenase E1 alpha subunit GB:AAB86803 GI:2454182 from (Arabidopsis thaliana); identical to cDNA pyruvate dehydrogenase E1 alpha subunit mRNA, nuclear gene encoding plastid protein GI:2454181 protein_id AT1G01090.1p transcript_id AT1G01090.1 protein_id AT1G01090.1p transcript_id AT1G01090.1
At1g01100	chr1:000050284	0	C/50284-50337,50419-50631,50883-50954	gene_syn T25K16.9, T25K16_9  product structural constituent of ribosome go_component intracellular|GO:0005622||IEA go_component ribosome|GO:0005840||IEA go_component ribosome|GO:0005840||ISS go_process translational elongation|GO:0006414||IEA go_process translational elongation|GO:0006414||ISS go_function structural constituent of ribosome|GO:0003735||IEA go_function structural constituent of ribosome|GO:0003735||ISS note 60S acidic ribosomal protein P1 (RPP1A), similar to 60S ACIDIC RIBOSOMAL PROTEIN P1 GB:O23095 from (Arabidopsis thaliana) protein_id AT1G01100.1p transcript_id AT1G01100.1 protein_id AT1G01100.1p transcript_id AT1G01100.1
At1g01110	chr1:000053022	0	W/53022-53183,53484-53624,53703-54494	gene_syn T25K16.10, T25K16_10  product unknown protein go_component mitochondrion|GO:0005739||IEA go_function molecular function unknown|GO:0005554||ND note expressed protein, contains Prosite PS00165: Serine/threonine dehydratases pyridoxal-phosphate attachment site protein_id AT1G01110.1p transcript_id AT1G01110.1 protein_id AT1G01110.1p transcript_id AT1G01110.1
At1g01120	chr1:000057392	0	C/57392-58978	gene_syn T25K16.11, T25K16_11 gene KCS1 function Encodes a condensing enzyme (3-ketoacyl-CoA synthase) which is involved in the critical fatty acid elongation process in wax biosynthesis.  product KCS1; acyltransferase go_process very-long-chain fatty acid metabolism|GO:0000038|10074711|IDA go_process fatty acid elongation|GO:0030497|10074711|IDA go_process cuticle biosynthesis|GO:0042335|10074711|IMP go_function acyltransferase activity|GO:0008415||ISS go_component membrane|GO:0016020|10074711|ISS go_process wax biosynthesis|GO:0010025|10074711|IDA go_process wax biosynthesis|GO:0010025|10074711|IMP go_function fatty acid elongase activity|GO:0009922|10074711|IDA note fatty acid elongase 3-ketoacyl-CoA synthase 1 (KCS1), nearly identical to GB:AAC99312 GI:4091810 from (Arabidopsis thaliana) protein_id AT1G01120.1p transcript_id AT1G01120.1 protein_id AT1G01120.1p transcript_id AT1G01120.1
At1g01130	chr1:000061963	0	C/61963-62124,63431-63811	gene_syn F6F3.33  product unknown protein go_component cellular component unknown|GO:0008372||ND go_process biological process unknown|GO:0000004||ND go_function molecular function unknown|GO:0005554||ND note expressed protein, ; expression supported by MPSS protein_id AT1G01130.1p transcript_id AT1G01130.1 protein_id AT1G01130.1p transcript_id AT1G01130.1
At1g01140	chr1:000064398	0	C/64398-64475,64570-64656,64751-64807,64901-65017,65110-65217,65331-65456,65563-65652,65739-65864,66107-66160,66262-66342,66450-66557,66678-66749,66835-66897,67324-67512	gene_syn CBL-INTERACTING PROTEIN KINASE 9, F6F3.28, PKS6 gene CIPK9 function Encodes a CBL-interacting protein kinase with similarity to SOS2  product CIPK9 (CBL-INTERACTING PROTEIN KINASE 9); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase go_component mitochondrion|GO:0005739||IEA go_process protein amino acid phosphorylation|GO:0006468||IEA go_process signal transduction|GO:0007165||IEA go_function protein kinase activity|GO:0004672||IEA go_function protein serine/threonine kinase activity|GO:0004674||IEA go_function protein-tyrosine kinase activity|GO:0004713||IEA go_function ATP binding|GO:0005524||IEA go_function kinase activity|GO:0016301||ISS note CBL-interacting protein kinase 9 (CIPK9), identical to CBL-interacting protein kinase 9 (Arabidopsis thaliana) gi|13249117|gb|AAK16684; contains Pfam profiles PF00069: Protein kinase domain and PF03822: NAF domain; identical to cDNA CBL-interacting protein kinase 9 (CIPK9) GI:13249116 protein_id AT1G01140.3p transcript_id AT1G01140.3 protein_id AT1G01140.3p transcript_id AT1G01140.3
At1g01140	chr1:000064398	0	C/64398-64475,64582-64656,64751-64807,64901-65017,65110-65217,65331-65456,65563-65652,65733-65864,66107-66160,66262-66342,66450-66557,66678-66749,66835-66897,67324-67512	gene_syn CBL-INTERACTING PROTEIN KINASE 9, F6F3.28, PKS6 gene CIPK9 function Encodes a CBL-interacting protein kinase with similarity to SOS2  product CIPK9 (CBL-INTERACTING PROTEIN KINASE 9); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase go_component mitochondrion|GO:0005739||IEA go_process protein amino acid phosphorylation|GO:0006468||IEA go_process signal transduction|GO:0007165||IEA go_function protein kinase activity|GO:0004672||IEA go_function protein serine/threonine kinase activity|GO:0004674||IEA go_function protein-tyrosine kinase activity|GO:0004713||IEA go_function ATP binding|GO:0005524||IEA go_function kinase activity|GO:0016301||ISS note CBL-interacting protein kinase 9 (CIPK9), identical to CBL-interacting protein kinase 9 (Arabidopsis thaliana) gi|13249117|gb|AAK16684; contains Pfam profiles PF00069: Protein kinase domain and PF03822: NAF domain; identical to cDNA CBL-interacting protein kinase 9 (CIPK9) GI:13249116 protein_id AT1G01140.2p transcript_id AT1G01140.2 protein_id AT1G01140.2p transcript_id AT1G01140.2
At1g01140	chr1:000064398	0	C/64398-64475,64582-64656,64751-64807,64901-65017,65110-65217,65331-65456,65563-65652,65739-65864,66107-66160,66262-66342,66450-66557,66678-66749,66835-66897,67324-67512	gene_syn CBL-INTERACTING PROTEIN KINASE 9, F6F3.28, PKS6 gene CIPK9 function Encodes a CBL-interacting protein kinase with similarity to SOS2  product CIPK9 (CBL-INTERACTING PROTEIN KINASE 9); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase go_component mitochondrion|GO:0005739||IEA go_process protein amino acid phosphorylation|GO:0006468||IEA go_process signal transduction|GO:0007165||IEA go_function protein kinase activity|GO:0004672||IEA go_function protein serine/threonine kinase activity|GO:0004674||IEA go_function protein-tyrosine kinase activity|GO:0004713||IEA go_function ATP binding|GO:0005524||IEA go_function kinase activity|GO:0016301||ISS note CBL-interacting protein kinase 9 (CIPK9), identical to CBL-interacting protein kinase 9 (Arabidopsis thaliana) gi|13249117|gb|AAK16684; contains Pfam profiles PF00069: Protein kinase domain and PF03822: NAF domain; identical to cDNA CBL-interacting protein kinase 9 (CIPK9) GI:13249116 protein_id AT1G01140.1p transcript_id AT1G01140.1 protein_id AT1G01140.1p transcript_id AT1G01140.1
At1g01150	chr1:000070115	0	C/70115-70285,70840-70968,71041-71721,71942-71998	gene_syn F6F3.30  product unknown protein note expressed protein, ; expression supported by MPSS protein_id AT1G01150.1p transcript_id AT1G01150.1 protein_id AT1G01150.1p transcript_id AT1G01150.1
At1g01160	chr1:000072583	0	W/72583-72669,73087-73163,73287-73395,73488-73740,73822-73883	gene_syn F6F3.29, GRF1-INTERACTING FACTOR 2 gene GIF2 function Arabidopsis thaliana GRF1-interacting factor 2 (GIF2) mRNA  product GIF2 (GRF1-INTERACTING FACTOR 2) go_process biological process unknown|GO:0000004||ND go_component nucleus|GO:0005634|15326298|ISS go_function transcription coactivator activity|GO:0003713|12974814|ISS go_function protein binding|GO:0005515|15326298|IPI note SSXT protein-related / transcription co-activator-related, similar to SYT/SSX4 fusion protein (GI:11127695) (Homo sapiens); supporting cDNA gi|21539891|gb|AY102640.1|; contains Pfam profile PF05030: SSXT protein (N-terminal region) protein_id AT1G01160.1p transcript_id AT1G01160.1 protein_id AT1G01160.1p transcript_id AT1G01160.1
At1g01170	chr1:000074105	0	C/74105-74250,74338-74443	gene_syn F6F3.32  product unknown protein go_component endomembrane system|GO:0012505||IEA go_process response to stress|GO:0006950||ISS go_function molecular function unknown|GO:0005554||ND note ozone-responsive stress-related protein, putative, similar to stress-related ozone-induced protein AtOZI1 (GI:790583) (Arabidopsis thaliana); contains 1 predicted transmembrane domain; protein_id AT1G01170.1p transcript_id AT1G01170.1 protein_id AT1G01170.1p transcript_id AT1G01170.1
At1g01180	chr1:000075633	0	W/75633-76547,76814-76951,77031-77280,77313-77446	gene_syn F6F3.5  product unknown protein go_component mitochondrion|GO:0005739||IEA go_process biological process unknown|GO:0000004||ND note expressed protein protein_id AT1G01180.1p transcript_id AT1G01180.1 protein_id AT1G01180.1p transcript_id AT1G01180.1
At1g01183	chr1:000078932	0	C/78932-79032	gene_syn MIR165a gene MIR165a function Encodes a microRNA. MicroRNAs are regulatory RNAs with a mature length of ~21-nucleotides that are processed from hairpin precursors by Dicer-like enzymes. MicroRNAs can negatively regulate gene expression by attenuating translation or by directing mRNA cleavage. Mature sequence: TCGGACCAGGCTTCATCCCCC product MIR165a; miRNA 
At1g01190	chr1:000083045	0	C/83045-83671,83884-84864	gene_syn F6F3.25 gene CYP78A8 function member of CYP78A  product CYP78A8; heme binding / iron ion binding / monooxygenase/ oxygen binding go_component endomembrane system|GO:0012505||IEA go_process electron transport|GO:0006118||IEA go_function monooxygenase activity|GO:0004497||IEA go_function iron ion binding|GO:0005506||IEA go_function oxygen binding|GO:0019825||ISS go_function heme binding|GO:0020037||IEA note cytochrome P450, putative, similar to cytochrome P450 SP:O48927 from (Glycine max) protein_id AT1G01190.1p transcript_id AT1G01190.1 protein_id AT1G01190.1p transcript_id AT1G01190.1
At1g01200	chr1:000086715	0	C/86715-87162,87880-88145	gene_syn F6F3.1, F6F3_1  product GTP binding go_component cellular component unknown|GO:0008372||ND go_process intracellular protein transport|GO:0006886||IEA go_process small GTPase mediated signal transduction|GO:0007264||IEA go_process protein transport|GO:0015031||IEA go_function GTP binding|GO:0005525||IEA go_function GTP binding|GO:0005525||ISS note Ras-related GTP-binding protein, putative, similar to GTP-binding protein GB:D12541 GI:303736 from (Pisum sativum) protein_id AT1G01200.1p transcript_id AT1G01200.1 protein_id AT1G01200.1p transcript_id AT1G01200.1
At1g01210	chr1:000088977	0	W/88977-89081,89173-89263,89405-89529	gene_syn F6F3.2, F6F3_2  product DNA binding / DNA-directed RNA polymerase/ transcription factor go_component nucleus|GO:0005634||ISS go_process transcription|GO:0006350||IEA go_process RNA elongation|GO:0006354||IEA go_process RNA elongation|GO:0006354||ISS go_process regulation of transcription, DNA-dependent|GO:0006355||IEA go_process regulation of transcription, DNA-dependent|GO:0006355||ISS go_function DNA binding|GO:0003677||IEA go_function DNA binding|GO:0003677||ISS go_function transcription factor activity|GO:0003700||IEA go_function transcription factor activity|GO:0003700||ISS go_function DNA-directed RNA polymerase activity|GO:0003899||IEA go_function DNA-directed RNA polymerase activity|GO:0003899||ISS note DNA-directed RNA polymerase III family protein, similar to SP|O13896 DNA-directed RNA polymerases III 12.5 kDa polypeptide (EC 2.7.7.6) {Schizosaccharomyces pombe}; contains Pfam profiles PF02150: RNA polymerases M/15 Kd subunit, PF01096: Transcription factor S-II (TFIIS) protein_id AT1G01210.1p transcript_id AT1G01210.1 protein_id AT1G01210.1p transcript_id AT1G01210.1
At1g01220	chr1:000091750	0	W/91750-92070,92270-92501,92569-92933,93045-93171,93271-94281,94357-95075,95160-95552	gene_syn F6F3.3, F6F3_3  product ATP binding / galactokinase/ kinase/ phosphotransferase, alcohol group as acceptor go_component cytoplasm|GO:0005737||IEA go_component mitochondrion|GO:0005739||IEA go_process metabolism|GO:0008152||IEA go_process phosphorylation|GO:0016310||IEA go_function galactokinase activity|GO:0004335||ISS go_function ATP binding|GO:0005524||IEA go_function ATP binding|GO:0005524||ISS go_function kinase activity|GO:0016301||IEA go_function phosphotransferase activity, alcohol group as acceptor|GO:0016773||IEA note GHMP kinase-related, contains similarity to L-fucose kinase (Homo sapiens) gi|21212956|emb|CAD29647 protein_id AT1G01220.1p transcript_id AT1G01220.1 protein_id AT1G01220.1p transcript_id AT1G01220.1
At1g01225	chr1:000096064	0	W/96064-96157,96554-97242	product unknown protein go_component cellular component unknown|GO:0008372||ND note NC domain-containing protein-related, contains weak hit to Pfam profile PF04970: NC domain protein_id AT1G01225.1p transcript_id AT1G01225.1 protein_id AT1G01225.1p transcript_id AT1G01225.1
At1g01230	chr1:000097620	0	W/97620-97805,98457-98605,98908-99046	gene_syn F6F3.4, F6F3_4  product unknown protein go_component endoplasmic reticulum|GO:0005783||ISS go_component integral to membrane|GO:0016021||IEA go_process protein folding|GO:0006457||ISS go_function molecular function unknown|GO:0005554||ND note ORMDL family protein, contains Pfam domain PF04061: ORMDL family protein_id AT1G01230.1p transcript_id AT1G01230.1 protein_id AT1G01230.1p transcript_id AT1G01230.1
At1g01240	chr1:000100683	0	W/100683-101678	gene_syn F633.5, F633_5, F6F3.27  product unknown protein go_component mitochondrion|GO:0005739||IEA go_process N-terminal protein myristoylation|GO:0006499|12912986|IEA note expressed protein protein_id AT1G01240.1p transcript_id AT1G01240.1 protein_id AT1G01240.1p transcript_id AT1G01240.1
At1g01250	chr1:000104731	0	C/104731-105309	gene_syn F6F3.6, F6F3_6 function encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.  product DNA binding / transcription factor go_component nucleus|GO:0005634||IC go_process regulation of transcription, DNA-dependent|GO:0006355||IEA go_process regulation of transcription, DNA-dependent|GO:0006355||ISS go_function DNA binding|GO:0003677||ISS go_function transcription factor activity|GO:0003700|11118137|ISS go_function transcription factor activity|GO:0003700||ISS note AP2 domain-containing transcription factor, putative, similar to transcription factor TINY GB:CAA64359 GI:1246403 from (Arabidopsis thaliana) protein_id AT1G01250.1p transcript_id AT1G01250.1 protein_id AT1G01250.1p transcript_id AT1G01250.1
At1g01260	chr1:000109595	0	W/109595-111367	gene_syn F6F3.7, F6F3_7  product DNA binding / transcription factor go_component nucleus|GO:0005634||IEA go_process regulation of transcription|GO:0045449|11118137|TAS go_function DNA binding|GO:0003677||ISS go_function transcription factor activity|GO:0003700|11118137|ISS go_function transcription factor activity|GO:0003700|12679534|ISS note basic helix-loop-helix (bHLH) family protein, contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain protein_id AT1G01260.1p transcript_id AT1G01260.1 protein_id AT1G01260.1p transcript_id AT1G01260.1
At1g01270	chr1:000111890	0	C/111890-111961	gene_syn 51947.TRNA-GLN-1 product pre-tRNA go_process translational elongation|GO:0006414|8980477|TAS go_function triplet codon-amino acid adaptor activity|GO:0030533|8980477|TAS note tRNA-Gln (anticodon: CTG) 
At1g01280	chr1:000112290	0	W/112290-113195,113279-113905	gene_syn F6F3.8, F6F3_8 gene CYP703A2 function member of CYP703A  product CYP703A2; heme binding / iron ion binding / monooxygenase/ oxygen binding go_component endomembrane system|GO:0012505||IEA go_process electron transport|GO:0006118||IEA go_function monooxygenase activity|GO:0004497||IEA go_function iron ion binding|GO:0005506||IEA go_function oxygen binding|GO:0019825||ISS go_function heme binding|GO:0020037||IEA note cytochrome P450 family protein, similar to cytochrome P450 GB:BAA92894 GI:7339658 from ( Petunia hybrida) protein_id AT1G01280.1p transcript_id AT1G01280.1 protein_id AT1G01280.1p transcript_id AT1G01280.1
At1g01290	chr1:000114299	0	W/114299-114433,114619-115296	gene_syn COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 3, F6F3.9, F6F3_9 gene CNX3 function COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 3. Encodes a protein involved in molybdenum cofactor biosynthesis. Homologous to E.coli MoaC. Expression is low in all tissues examined, except in roots. Appears to have targeting signals for chloroplast or mitochondria  product CNX3 (COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 3); catalytic go_function catalytic activity|GO:0003824|7890743|IGI go_component mitochondrion|GO:0005739|7890743|ISS go_component chloroplast|GO:0009507|7890743|ISS go_process Mo-molybdopterin cofactor biosynthesis|GO:0006777|7890743|IGI note molybdopterin biosynthesis CNX3 protein / molybdenum cofactor biosynthesis enzyme CNX3 (CNX3), identical to molybdopterin biosynthesis CNX3 protein SP|Q39056 from (Arabidopsis thaliana) protein_id AT1G01290.1p transcript_id AT1G01290.1 protein_id AT1G01290.1p transcript_id AT1G01290.1
At1g01300	chr1:000117065	0	W/117065-118522	gene_syn F6F3.10, F6F3_10  product aspartic-type endopeptidase/ pepsin A go_component endomembrane system|GO:0012505||IEA go_process proteolysis|GO:0006508||IEA go_process proteolysis|GO:0006508||ISS go_function aspartic-type endopeptidase activity|GO:0004190||IEA go_function pepsin A activity|GO:0004194||IEA go_function pepsin A activity|GO:0004194||ISS note aspartyl protease family protein, contains Pfam domain, PF00026: eukaryotic aspartyl protease protein_id AT1G01300.1p transcript_id AT1G01300.1 protein_id AT1G01300.1p transcript_id AT1G01300.1
At1g01310	chr1:000120221	0	W/120221-120946	gene_syn F6F3.11, F6F3_11  product unknown protein go_component extracellular region|GO:0005576||IEA go_component extracellular region|GO:0005576||ISS go_process biological process unknown|GO:0000004||ND go_function molecular function unknown|GO:0005554||ND note allergen V5/Tpx-1-related family protein, similar to pathogenesis related protein-1 GB:AAC25629 GI:3290004 from (Zea mays); contains Pfam profile PF00188: SCP-like extracellular protein protein_id AT1G01310.1p transcript_id AT1G01310.1 protein_id AT1G01310.1p transcript_id AT1G01310.1
At1g01320	chr1:000121582	0	C/121582-123501,123579-123669,123785-123897,123992-124123,124211-124394,124499-124632,124714-124818,124921-125046,125134-125226,125329-125655,125742-125843,125936-125998,126076-126589,126686-126840,126935-127453,127532-127573,127651-127782,127868-127935,128028-128312,128479-128551,128968-129060,129853-129914,130039-130099	gene_syn F6F3.12, F6F3_12  product unknown protein go_component cellular component unknown|GO:0008372||ND go_function molecular function unknown|GO:0005554||ND note tetratricopeptide repeat (TPR)-containing protein, low similarity to SP|P46825 Kinesin light chain (KLC) {Loligo pealeii}; contains Pfam profile PF00515: TPR Domain protein_id AT1G01320.1p transcript_id AT1G01320.1 protein_id AT1G01320.1p transcript_id AT1G01320.1
At1g01340	chr1:000132414	0	C/132414-132744,132824-133218,133303-133539,133641-133752,133911-134206,134289-134501,134582-135118	gene_syn ACBK1, CNGC10, F6F3.13, F6F3_13 gene ATCNGC10 function member of Cyclic nucleotide gated channel family  product ATCNGC10; calmodulin binding / cyclic nucleotide binding / ion channel go_component membrane|GO:0016020||IEA go_process ion transport|GO:0006811||IEA go_function ion channel activity|GO:0005216||ISS go_function calmodulin binding|GO:0005516|11782485|ISS go_function calmodulin binding|GO:0005516||ISS go_function cyclic nucleotide binding|GO:0030551||ISS note cyclic nucleotide-regulated ion channel (CNGC10) (ACBK1), almost identical to CaM-regulated potassium ion channel (ACBK1) GI:8515883 from (Arabidopsis thaliana); contains Pfam domain, PF00520: Ion transport protein protein_id AT1G01340.1p transcript_id AT1G01340.1 protein_id AT1G01340.1p transcript_id AT1G01340.1
At1g01350	chr1:000136732	0	W/136732-136816,136935-137758,137848-137966,138522-138778,138863-139114,139203-139345,139488-139568	gene_syn F6F3.14, F6F3.15, F6F3_14, F6F3_15  product nucleic acid binding / ubiquitin-protein ligase/ zinc ion binding go_component ubiquitin ligase complex|GO:0000151||IEA go_process protein ubiquitination|GO:0016567||IEA go_function nucleic acid binding|GO:0003676||IEA go_function nucleic acid binding|GO:0003676||ISS go_function ubiquitin-protein ligase activity|GO:0004842||IEA go_function zinc ion binding|GO:0008270||IEA note zinc finger (CCCH-type/C3HC4-type RING finger) family protein, similar to SP|O15541 Zinc finger protein 183 {Homo sapiens}; contains Pfam profiles PF04396: Protein of unknown function, DUF537, PF00097: Zinc finger, C3HC4 type (RING finger), PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar) protein_id AT1G01350.1p transcript_id AT1G01350.1 protein_id AT1G01350.1p transcript_id AT1G01350.1
At1g01360	chr1:000142138	0	W/142138-142281,142424-142639,142711-142914	gene_syn F6F3.16, F6F3_16  product unknown protein go_component cellular component unknown|GO:0008372||ND note expressed protein, similar to hypothetical protein GB:CAB45785 GI:5262156 from (Arabidopsis thaliana) protein_id AT1G01360.1p transcript_id AT1G01360.1 protein_id AT1G01360.1p transcript_id AT1G01360.1
At1g01370	chr1:000143773	0	W/143773-143824,143934-143977,144064-144109,144193-144227,144315-144351,144447-144559,144927-145004,145132-145207,145345-145400	gene_syn F6F3.17, F6F3_17 gene HTR12 function Encodes a centromere-identifying protein histone H3 variant.Localized at centromeres in both mitotic and meiotic cells.  product HTR12; DNA binding go_process nucleosome assembly|GO:0006334||IEA go_process chromosome organization and biogenesis (sensu Eukaryota)|GO:0007001||IEA go_function DNA binding|GO:0003677||IEA go_function DNA binding|GO:0003677||ISS go_component chromosome, pericentric region|GO:0000775|12034896|IDA note centromeric histone H3 HTR12 (HTR12), similar to histone H3 GB:X17141 GI:10795 from Tetrahymena pyriformis, GI:161790 from Tetrahymena thermophila; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4 protein_id AT1G01370.1p transcript_id AT1G01370.1 protein_id AT1G01370.1p transcript_id AT1G01370.1
At1g01380	chr1:000147267	0	W/147267-147333,147452-147539,147644-147740	gene_syn ENHANCER OF TRY AND CPC 1, F6F3.18, F6F3_18 gene ETC1 function ETC1 is involved in trichome and root hair patterning in Arabidopsis.  product ETC1 (ENHANCER OF TRY AND CPC 1); DNA binding / transcription factor go_component nucleus|GO:0005634||IEA go_process regulation of transcription, DNA-dependent|GO:0006355||ISS go_function DNA binding|GO:0003677||ISS go_function transcription factor activity|GO:0003700|11118137|ISS go_function transcription factor activity|GO:0003700||ISS note myb family transcription factor, similar to myb homolog (CPC) GI:2346966 from (Arabidopsis thaliana) protein_id AT1G01380.1p transcript_id AT1G01380.1 protein_id AT1G01380.1p transcript_id AT1G01380.1
At1g01390	chr1:000148319	0	C/148319-149761	gene_syn F6F3.19, F6F3_19  product UDP-glycosyltransferase/ transferase, transferring glycosyl groups go_process metabolism|GO:0008152||IEA go_function UDP-glycosyltransferase activity|GO:0008194||ISS go_function transferase activity, transferring glycosyl groups|GO:0016757||ISS note UDP-glucoronosyl/UDP-glucosyl transferase family protein, contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase protein_id AT1G01390.1p transcript_id AT1G01390.1 protein_id AT1G01390.1p transcript_id AT1G01390.1
At1g01400	chr1:000151158	0	C/151158-151298,151393-151731,151932-152002,152086-152149	gene_syn F6F3.20, F6F3_20  product unknown protein go_component cellular component unknown|GO:0008372||ND go_process biological process unknown|GO:0000004||ND go_function molecular function unknown|GO:0005554||ND note expressed protein protein_id AT1G01400.1p transcript_id AT1G01400.1 protein_id AT1G01400.1p transcript_id AT1G01400.1
At1g01410	chr1:000153113	0	W/153113-154198	gene_syn F6F3.21, F6F3_21  product RNA binding go_component cellular component unknown|GO:0008372||ND go_function RNA binding|GO:0003723||IEA note hypothetical protein protein_id AT1G01410.1p transcript_id AT1G01410.1 protein_id AT1G01410.1p transcript_id AT1G01410.1
At1g01420	chr1:000154566	0	C/154566-156011	gene_syn F6F3.22, F6F3_22  product UDP-glycosyltransferase/ transferase, transferring glycosyl groups go_component cellular component unknown|GO:0008372||ND go_process metabolism|GO:0008152||IEA go_function UDP-glycosyltransferase activity|GO:0008194||ISS go_function transferase activity, transferring glycosyl groups|GO:0016757||ISS note UDP-glucoronosyl/UDP-glucosyl transferase family protein, contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase protein_id AT1G01420.1p transcript_id AT1G01420.1 protein_id AT1G01420.1p transcript_id AT1G01420.1
At1g01430	chr1:000156953	0	C/156953-157756,157829-158112,158254-158536	gene_syn F6F3.23, F6F3_23  product unknown protein go_component cellular component unknown|GO:0008372||ND go_process biological process unknown|GO:0000004||ND note expressed protein, similar to hypothetical protein GB:CAB80917 GI:7267605 from (Arabidopsis thaliana) protein_id AT1G01430.1p transcript_id AT1G01430.1 protein_id AT1G01430.1p transcript_id AT1G01430.1
At1g01440	chr1:000159935	0	C/159935-159992,160079-160302,160418-160478,160568-162219	gene_syn F6F3.24, F6F3_24  product unknown protein go_component cellular component unknown|GO:0008372||ND go_process biological process unknown|GO:0000004||ND go_function molecular function unknown|GO:0005554||ND note extra-large G-protein-related, weak similarity to extra-large G-protein (AtXLG1) (GI:3201682) (Arabidopsis thaliana) protein_id AT1G01440.1p transcript_id AT1G01440.1 protein_id AT1G01440.1p transcript_id AT1G01440.1
At1g01450	chr1:000164105	0	C/164105-165517	gene_syn F22L4.1, F22L4_1  product ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase go_component cellular component unknown|GO:0008372||ND go_process protein amino acid phosphorylation|GO:0006468||IEA go_function protein kinase activity|GO:0004672||IEA go_function protein serine/threonine kinase activity|GO:0004674||IEA go_function protein-tyrosine kinase activity|GO:0004713||IEA go_function ATP binding|GO:0005524||IEA go_function kinase activity|GO:0016301||ISS note protein kinase-related, contains eukaryotic protein kinase domain, INTERPRO:IPR000719 protein_id AT1G01450.1p transcript_id AT1G01450.1 protein_id AT1G01450.1p transcript_id AT1G01450.1
At1g01460	chr1:000169115	0	W/169115-169257,169347-169509,169600-169710,169806-169993,170071-170162,170266-170313,170412-170507,170622-170760,170851-171154	gene_syn ATPIPK11, F22L4.2, F22L4_2 function Type I phosphatidylinositol-4-phosphate 5-kinase, subfamily A.  product 1-phosphatidylinositol-4-phosphate 5-kinase go_component cellular component unknown|GO:0008372||ND go_process biological process unknown|GO:0000004||ND go_function 1-phosphatidylinositol-4-phosphate 5-kinase activity|GO:0016308||IEA go_function 1-phosphatidylinositol-4-phosphate 5-kinase activity|GO:0016308||ISS note phosphatidylinositol-4-phosphate 5-kinase family protein, similar to phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1 (Arabidopsis thaliana) GI:3702691; contains Pfam profile PF01504: Phosphatidylinositol-4-phosphate 5-Kinase protein_id AT1G01460.1p transcript_id AT1G01460.1 protein_id AT1G01460.1p transcript_id AT1G01460.1
At1g01470	chr1:000172295	0	C/172295-172544,172621-172826	gene_syn F22L4.3, F22L4_3, LATE EMBRYOGENESIS ABUNDANT 14, LIGHT STRESS-REGULATED 3, LSR3 gene LEA14 function Encodes late-embryogenesis abundant protein whose mRNA levels are induced in response to wounding and light stress. Might be involved in protection against dessication.  product LEA14 (LATE EMBRYOGENESIS ABUNDANT 14) go_process response to desiccation|GO:0009269||ISS go_process embryonic development (sensu Magnoliophyta)|GO:0009793||ISS go_function molecular function unknown|GO:0005554||ND go_component cellular component unknown|GO:0008372||ND go_process response to wounding|GO:0009611|12068110|IEP go_process response to high light intensity|GO:0009644|11683875|IEP go_function molecular function unknown|GO:0005554||ND note late embryogenesis abundant protein, putative / LEA protein, putative, similar to SP|P46518 Late embryogenesis abundant protein Lea14-A {Gossypium hirsutum}; contains Pfam profile PF03168: Late embryogenesis abundant protein protein_id AT1G01470.1p transcript_id AT1G01470.1 protein_id AT1G01470.1p transcript_id AT1G01470.1
At1g01480	chr1:000175862	0	W/175862-176032,176207-176338,176592-176752,177025-178051	gene_syn 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE, AT-ACC2, EC 4.4.1.14, F22L4.4, F22L4_4, S-ADENOSYL-L-METHIONINE METHYLTHIOADENOSINE-LYASE gene ACS2 function a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family, isolated from a flower-specific cDNA library.  product ACS2 go_process ethylene biosynthesis|GO:0009693|1357670|TAS go_process ethylene biosynthesis|GO:0009693|1438312|TAS go_component cellular component unknown|GO:0008372||ND go_function 1-aminocyclopropane-1-carboxylate synthase activity|GO:0016847|8566772|IDA note 1-aminocyclopropane-1-carboxylate synthase 2 / ACC synthase 2 (ACS2) (ACC1), identical to 1-aminocyclopropane-1-carboxylate synthase SP|Q06402 (GI:166578) from (Arabidopsis thaliana) protein_id AT1G01480.1p transcript_id AT1G01480.1 protein_id AT1G01480.1p transcript_id AT1G01480.1
At1g01480	chr1:000176607	0	W/176607-176752,177025-178051	gene_syn 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE, AT-ACC2, EC 4.4.1.14, F22L4.4, F22L4_4, S-ADENOSYL-L-METHIONINE METHYLTHIOADENOSINE-LYASE gene ACS2 function a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family, isolated from a flower-specific cDNA library.  product ACS2 go_process ethylene biosynthesis|GO:0009693|1357670|TAS go_process ethylene biosynthesis|GO:0009693|1438312|TAS go_component cellular component unknown|GO:0008372||ND go_function 1-aminocyclopropane-1-carboxylate synthase activity|GO:0016847|8566772|IDA note 1-aminocyclopropane-1-carboxylate synthase 2 / ACC synthase 2 (ACS2) (ACC1), identical to 1-aminocyclopropane-1-carboxylate synthase SP|Q06402 (GI:166578) from (Arabidopsis thaliana) protein_id AT1G01480.2p transcript_id AT1G01480.2 protein_id AT1G01480.2p transcript_id AT1G01480.2
At1g01490	chr1:000180401	0	C/180401-180852,181347-181422,182061-182066	gene_syn F22L4.5, F22L4_5  product metal ion binding go_component cellular component unknown|GO:0008372||ND go_process metal ion transport|GO:0030001||IEA go_function metal ion binding|GO:0046872||IEA go_function metal ion binding|GO:0046872||ISS note heavy-metal-associated domain-containing protein, contains Pfam profile PF00403: Heavy-metal-associated domain protein_id AT1G01490.1p transcript_id AT1G01490.1 protein_id AT1G01490.1p transcript_id AT1G01490.1
At1g01500	chr1:000185260	0	W/185260-186009,186340-186573	gene_syn F22L4.17, F22L4_17  product unknown protein go_component cellular component unknown|GO:0008372||ND go_process biological process unknown|GO:0000004||ND go_function molecular function unknown|GO:0005554||ND note expressed protein, identical to cDNA unknown protein GI:1922247 embY10087.1 protein_id AT1G01500.1p transcript_id AT1G01500.1 protein_id AT1G01500.1p transcript_id AT1G01500.1
At1g01510	chr1:000187235	0	W/187235-187822,188011-188176,188284-188414,188529-189320,189417-189464,189562-189675,189765-189836	gene_syn ANGUSTIFOLIA, F22L4.6, F22L4_6 gene AN function Encodes a homolog of human CtBP. Mutant has longer and thicker leaves than wild type. Involved in controlling polar cell expansion in the leaf width direction.  product AN (ANGUSTIFOLIA) go_component cellular component unknown|GO:0008372||ND go_process microtubule cytoskeleton organization and biogenesis|GO:0000226|11889033|IMP go_process leaf morphogenesis|GO:0009965|8625845|IMP go_process monopolar cell growth|GO:0042814|8625845|IMP go_function protein binding|GO:0005515|11889033|IPI note C-terminal binding protein (ANGUSTIFOLIA), nearly identical to C-terminal binding protein ANGUSTIFOLIA (Arabidopsis thaliana) GI:15408535; contains Pfam profile PF02826: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein_id AT1G01510.1p transcript_id AT1G01510.1 protein_id AT1G01510.1p transcript_id AT1G01510.1
At1g01520	chr1:000190596	0	W/190596-190828,190941-190998,191138-191258,191341-191475,191579-191692,191780-191889,191967-192026,192107-192139	gene_syn F22L4.18, F22L4_18  product DNA binding / transcription factor go_component nucleus|GO:0005634||IEA go_component chloroplast|GO:0009507||IEA go_process regulation of transcription, DNA-dependent|GO:0006355||ISS go_function DNA binding|GO:0003677||ISS go_function transcription factor activity|GO:0003700|11118137|ISS go_function transcription factor activity|GO:0003700||ISS note myb family transcription factor, similar to myb-related protein GI:2505876 from (Arabidopsis thaliana) protein_id AT1G01520.1p transcript_id AT1G01520.1 protein_id AT1G01520.1p transcript_id AT1G01520.1
At1g01530	chr1:000192640	0	C/192640-193071,193351-193662	gene_syn F22L4.7, F22L4_7  product DNA binding / transcription factor go_component nucleus|GO:0005634||IEA go_component mitochondrion|GO:0005739||IEA go_process regulation of transcription, DNA-dependent|GO:0006355||IEA go_function DNA binding|GO:0003677||ISS go_function transcription factor activity|GO:0003700|11118137|ISS note MADS-box protein (AGL28), similar to MADS-box transcription factor GI:6580943 from (Picea abies); contains Pfam profile PF00319: SRF-type transcription factor (DNA-binding and dimerisation domain) protein_id AT1G01530.1p transcript_id AT1G01530.1 protein_id AT1G01530.1p transcript_id AT1G01530.1
At1g01540	chr1:000195980	0	W/195980-196542,197115-197219,197300-197422,197501-197671,197775-197904,197974-198183,198267-198383	gene_syn F22L4.8, F22L4_8  product ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase go_component cellular component unknown|GO:0008372||ND go_process protein amino acid phosphorylation|GO:0006468||IEA go_function protein kinase activity|GO:0004672||IEA go_function protein serine/threonine kinase activity|GO:0004674||IEA go_function protein-tyrosine kinase activity|GO:0004713||IEA go_function ATP binding|GO:0005524||IEA go_function kinase activity|GO:0016301||ISS note protein kinase family protein, contains protein kinase domain, Pfam:PF00069; contains serine/threonine protein kinase domain, INTERPRO:IPR002290 protein_id AT1G01540.2p transcript_id AT1G01540.2 protein_id AT1G01540.2p transcript_id AT1G01540.2
At1g01540	chr1:000195980	0	W/195980-196542,197115-197219,197300-197422,197501-197671,197775-197973	gene_syn F22L4.8, F22L4_8  product ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase go_component cellular component unknown|GO:0008372||ND go_process protein amino acid phosphorylation|GO:0006468||IEA go_function protein kinase activity|GO:0004672||IEA go_function protein serine/threonine kinase activity|GO:0004674||IEA go_function protein-tyrosine kinase activity|GO:0004713||IEA go_function ATP binding|GO:0005524||IEA go_function kinase activity|GO:0016301||ISS note protein kinase family protein, contains protein kinase domain, Pfam:PF00069; contains serine/threonine protein kinase domain, INTERPRO:IPR002290 protein_id AT1G01540.1p transcript_id AT1G01540.1 protein_id AT1G01540.1p transcript_id AT1G01540.1
At1g01550	chr1:000200526	0	W/200526-201575	gene_syn BYPASS 1, F22L4.9, F22L4_9 gene BPS1 function BYPASS1, required to prevent constitutive production of a root-derived graft-transmissible signal  product BPS1 (BYPASS 1) go_component chloroplast|GO:0009507||IEA go_function molecular function unknown|GO:0005554||ND note expressed protein protein_id AT1G01550.1p transcript_id AT1G01550.1 protein_id AT1G01550.1p transcript_id AT1G01550.1
At1g01560	chr1:000202345	0	W/202345-202508,202782-202911,202991-203128,203267-203662	gene_syn F22L4.10, F22L4_10 gene ATMPK11 function member of MAP Kinase  product ATMPK11; MAP kinase/ kinase go_process signal transduction|GO:0007165|12119167|IC go_function MAP kinase activity|GO:0004707|12119167|ISS go_function kinase activity|GO:0016301||ISS go_component cellular component unknown|GO:0008372||ND go_function MAP kinase activity|GO:0004707|11544109|ISS note mitogen-activated protein kinase, putative / MAPK, putative (MPK11), similar to MAP kinase 5 GI:4239889 from (Zea mays); mitogen-activated protein kinase (MAPK)(AtMPK11), PMID:12119167 protein_id AT1G01560.1p transcript_id AT1G01560.1 protein_id AT1G01560.1p transcript_id AT1G01560.1
At1g01570	chr1:000205176	0	W/205176-205949,206692-207243,207325-207435	gene_syn F22L4.11, F22L4_11  product transferase, transferring glycosyl groups go_component endomembrane system|GO:0012505||IEA go_process biological process unknown|GO:0000004||ND go_function transferase activity, transferring glycosyl groups|GO:0016757||ISS note fringe-related protein, + similar to hypothetical protein GB:AAC23643 (Arabidopsis thaliana) + weak similarity to Fringe (Schistocerca gregaria)(GI:6573138);Fringe encodes an extracellular protein that regulates Notch signalling. protein_id AT1G01570.1p transcript_id AT1G01570.1 protein_id AT1G01570.1p transcript_id AT1G01570.1
At1g01580	chr1:000209395	0	W/209395-209608,209764-209866,209950-210144,210385-210619,211052-211379,211474-211717,211855-212573,212671-212810	gene_syn F22L4.12, F22L4_12  product ferric-chelate reductase/ oxidoreductase go_component membrane|GO:0016020||IEA go_component membrane|GO:0016020||ISS go_process electron transport|GO:0006118||IEA go_process electron transport|GO:0006118||ISS go_function ferric-chelate reductase activity|GO:0000293||ISS go_function oxidoreductase activity|GO:0016491||IEA note ferric-chelate reductase, putative, similar to ferric-chelate reductase (FRO1) (Pisum sativum) GI:15341529; contains Pfam profile: PF01794 ferric reductase like transmembrane component protein_id AT1G01580.1p transcript_id AT1G01580.1 protein_id AT1G01580.1p transcript_id AT1G01580.1
At1g01590	chr1:000214229	0	W/214229-214406,214480-214582,214697-214897,215317-215554,215633-215960,216044-216293,216414-217090,217165-217304	gene_syn F22L4.13, F22L4_13 gene FRO1 function Putative ferric-chelate reductase  product FRO1; ferric-chelate reductase go_component membrane|GO:0016020||IEA go_component membrane|GO:0016020||ISS go_process electron transport|GO:0006118||IEA go_process electron transport|GO:0006118||ISS go_function ferric-chelate reductase activity|GO:0000293||ISS go_function ferric-chelate reductase activity|GO:0000293|10067892|ISS note ferric-chelate reductase, putative, similar to ferric-chelate reductase (FRO1) (Pisum sativum) GI:15341529; contains Pfam profile: PF01794 ferric reductase like transmembrane component protein_id AT1G01590.1p transcript_id AT1G01590.1 protein_id AT1G01590.1p transcript_id AT1G01590.1
At1g01600	chr1:000219200	0	W/219200-219621,219752-220994	gene_syn F22L4.14, F22L4_14 gene CYP86A4 function Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed significantly at highest level in mature stems and flowers.  product CYP86A4; oxygen binding go_component mitochondrion|GO:0005739||IEA go_function oxygen binding|GO:0019825||ISS go_process fatty acid metabolism|GO:0006631|15709153|IDA go_function fatty acid (omega-1)-hydroxylase activity|GO:0008393|15709153|IDA note cytochrome P450, putative, similar to cytochrome P450 GI:10442763 from (Triticum aestivum) protein_id AT1G01600.1p transcript_id AT1G01600.1 protein_id AT1G01600.1p transcript_id AT1G01600.1
At1g01610	chr1:000221950	0	C/221950-222359,222622-223096,223551-223866,223945-224255	gene_syn ATGPAT4, F22L4.15, F22L4_15, GPAT4 gene ATGPAT4/GPAT4 function Encodes a protein with glycerol-3-phosphate acyltransferase activity.  product ATGPAT4/GPAT4; 1-acylglycerol-3-phosphate O-acyltransferase/ acyltransferase go_process metabolism|GO:0008152||IEA go_process metabolism|GO:0008152||ISS go_function 1-acylglycerol-3-phosphate O-acyltransferase activity|GO:0003841|12897259|IGI go_function acyltransferase activity|GO:0008415||ISS note phospholipid/glycerol acyltransferase family protein, similar to unknown protein GI:3335359 from (Arabidopsis thaliana) protein_id AT1G01610.1p transcript_id AT1G01610.1 protein_id AT1G01610.1p transcript_id AT1G01610.1
At1g01620	chr1:000225986	0	C/225986-226081,226171-226311,226396-226691,226849-227176	gene_syn F22L4.16, F22L4_16, PIP1;3, TMP-B gene PIP1C function a member of the plasma membrane intrinsic protein subfamily PIP1. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed ubiquitously and protein level decreases slightly during leaf development.  product PIP1C; water channel go_component plasma membrane|GO:0005886|7920711|TAS go_component membrane|GO:0016020||ISS go_process transport|GO:0006810||ISS go_function water channel activity|GO:0015250||ISS go_component plasma membrane|GO:0005886|7920711|IDA go_process water transport|GO:0006833|7920711|IDA go_function water channel activity|GO:0015250|7920711|IDA note plasma membrane intrinsic protein 1C (PIP1C) / aquaporin PIP1.3 (PIP1.3) / transmembrane protein B (TMPB), identical to plasma membrane intrinsic protein 1c SP:Q08733 from (Arabidopsis thaliana) protein_id AT1G01620.1p transcript_id AT1G01620.1 protein_id AT1G01620.1p transcript_id AT1G01620.1
At1g01630	chr1:000229206	0	W/229206-229343,229429-229724,229829-229934,230349-230459,230559-230675	gene_syn T1N6.1, T1N6_1  product transporter go_component cellular component unknown|GO:0008372||ND go_process transport|GO:0006810||ISS go_function transporter activity|GO:0005215||ISS note SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative, contains Pfam PF00650 : CRAL/TRIO domain and PF03765 : CRAL/TRIO, N-terminus; similar to polyphosphoinositide binding protein Ssh2p GB:AAB94599 GI:2739046 from (Glycine max) protein_id AT1G01630.1p transcript_id AT1G01630.1 protein_id AT1G01630.1p transcript_id AT1G01630.1
At1g01640	chr1:000231164	0	C/231164-231655,231784-231915	gene_syn T1N6.2, T1N6_2  product protein binding go_component cellular component unknown|GO:0008372||ND go_process biological process unknown|GO:0000004||ND go_function protein binding|GO:0005515|15659098|IPI go_function protein binding|GO:0005515||ISS note speckle-type POZ protein-related, contains Pfam profile:PF00651 BTB/POZ domain; similar to Speckle-type POZ protein (SP:O43791) (Homo sapiens) protein_id AT1G01640.1p transcript_id AT1G01640.1 protein_id AT1G01640.1p transcript_id AT1G01640.1
At1g01650	chr1:000233188	0	C/233188-233297,233387-233470,233548-233618,234250-234392,234529-234621,234935-234988,235198-235360,235718-235752,235845-236027,236145-236296,236429-236537	gene_syn T1N6.3, T1N6_3  product D-alanyl-D-alanine endopeptidase/ peptidase go_component integral to membrane|GO:0016021||IEA go_process proteolysis|GO:0006508||ISS go_function peptidase activity|GO:0008233||ISS go_function D-alanyl-D-alanine endopeptidase activity|GO:0008717||IEA note similar to protease-associated (PA) domain-containing protein [Arabidopsis thaliana] (TAIR:At1g63690.2); similar to growth-on protein GRO10 [Euphorbia esula] (GB:AAL14629.1); contains InterPro domain Presenilin signal peptide peptidase (InterPro:IPR006639); contains InterPro domain Membrane protein of unknown function DUF435 (InterPro:IPR007369) protein_id AT1G01650.2p transcript_id AT1G01650.2 protein_id AT1G01650.2p transcript_id AT1G01650.2
At1g01650	chr1:000233188	0	C/233188-233297,233387-233470,233548-233618,234250-234392,234529-234621,234935-234988,235198-235360,235718-235752,235845-236027,236145-236296,236429-236548,236673-236784,236865-237023,237504-237647	gene_syn T1N6.3, T1N6_3  product D-alanyl-D-alanine endopeptidase/ peptidase go_component integral to membrane|GO:0016021||IEA go_process proteolysis|GO:0006508||IEA go_process proteolysis|GO:0006508||ISS go_function peptidase activity|GO:0008233||IEA go_function peptidase activity|GO:0008233||ISS go_function D-alanyl-D-alanine endopeptidase activity|GO:0008717||IEA note similar to protease-associated (PA) domain-containing protein [Arabidopsis thaliana] (TAIR:At1g63690.1); similar to protease-associated (PA) domain-containing protein [Arabidopsis thaliana] (TAIR:At1g63690.2); similar to putative growth-on protein GRO10 [Oryza sativa (japonica cultivar-group)] (GB:XP_468462.1); similar to growth-on protein GRO10 [Euphorbia esula] (GB:AAL14629.1); similar to putative growth-on protein GRO10 [Oryza sativa (japonica cultivar-group)] (GB:BAD62487.1); contains InterPro domain Protease-associated PA (InterPro:IPR003137); contains InterPro domain Presenilin signal peptide peptidase (InterPro:IPR006639); contains InterPro domain Membrane protein of unknown function DUF435 (InterPro:IPR007369) protein_id AT1G01650.1p transcript_id AT1G01650.1 protein_id AT1G01650.1p transcript_id AT1G01650.1
At1g01660	chr1:000240057	0	C/240057-240242,240352-240672,240744-240884,240960-241226,241306-241443,241539-241719,241805-241909,241983-242113,242214-242290,242449-242608	gene_syn T1N6.4, T1N6_4  product ubiquitin-protein ligase go_component ubiquitin ligase complex|GO:0000151||IEA go_process protein ubiquitination|GO:0016567||IEA go_function ubiquitin-protein ligase activity|GO:0004842||IEA note U-box domain-containing protein protein_id AT1G01660.1p transcript_id AT1G01660.1 protein_id AT1G01660.1p transcript_id AT1G01660.1
At1g01670	chr1:000242943	0	C/242943-243128,243336-243746,244035-244182,244257-244361,244505-244635,244770-244873,245151-245163	gene_syn T1N6.28, T1N6_28  product ubiquitin-protein ligase go_component ubiquitin ligase complex|GO:0000151||IEA go_process protein ubiquitination|GO:0016567||IEA go_function ubiquitin-protein ligase activity|GO:0004842||IEA note U-box domain-containing protein protein_id AT1G01670.1p transcript_id AT1G01670.1 protein_id AT1G01670.1p transcript_id AT1G01670.1
At1g01680	chr1:000246411	0	C/246411-246608,246731-246853,246949-247078,247167-247268,247362-247492,247577-247680,248191-248329	gene_syn T1N6.5, T1N6_5  product ubiquitin-protein ligase go_component ubiquitin ligase complex|GO:0000151||IEA go_process protein ubiquitination|GO:0016567||IEA go_function ubiquitin-protein ligase activity|GO:0004842||IEA note U-box domain-containing protein protein_id AT1G01680.1p transcript_id AT1G01680.1 protein_id AT1G01680.1p transcript_id AT1G01680.1
At1g01690	chr1:000249242	0	W/249242-249306,249543-249693,249774-249930,250014-250151,250536-250588,250669-250863,251004-251066,251101-251184,251260-251316,251399-251440,251922-252006,252121-252193,253024-253457,253531-253662,254210-254380,257225-257460,259011-259094,259163-259171	gene_syn T1N6.6, T1N6_6  product unknown protein go_component chloroplast|GO:0009507||IEA go_process biological process unknown|GO:0000004||ND go_function molecular function unknown|GO:0005554||ND note expressed protein protein_id AT1G01690.1p transcript_id AT1G01690.1 protein_id AT1G01690.1p transcript_id AT1G01690.1
At1g01700	chr1:000259495	0	C/259495-259614,259690-260034,260118-260417,260508-260582,260670-260824,260921-261037,261129-261474	gene_syn KINASE PARTNER PROTEIN-LIKE, KPP-LIKE, T1N6.8, T1N6_8 function member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato; expressed protein, contains Pfam profile PF03759: Domain of unknown function (DUF315)  product unknown protein go_component cellular component unknown|GO:0008372||ND go_process biological process unknown|GO:0000004||ND go_function molecular function unknown|GO:0005554||ISS note expressed protein, contains Pfam profile PF03759: Domain of unknown function (DUF315) protein_id AT1G01700.1p transcript_id AT1G01700.1 protein_id AT1G01700.1p transcript_id AT1G01700.1
At1g01710	chr1:000262950	0	W/262950-262965,263047-263139,263232-263299,263369-263444,263526-263572,263645-263770,263857-263934,264073-264160,264280-264392,264520-264582,264657-264712,264797-264901,265021-265077,265336-265437,265578-265626,265777-265845,265952-266029	gene_syn T1N6.10, T1N6.9, T1N6_10, T1N6_9  product acyl-CoA thioesterase/ cyclic nucleotide binding go_component cellular component unknown|GO:0008372||ND go_process acyl-CoA metabolism|GO:0006637||IEA go_process acyl-CoA metabolism|GO:0006637||ISS go_function acyl-CoA thioesterase activity|GO:0016291||IEA go_function acyl-CoA thioesterase activity|GO:0016291||ISS go_function cyclic nucleotide binding|GO:0030551||ISS note acyl-CoA thioesterase family protein, contains Pfam profiles: PF02551 acyl-CoA thioesterase, PF00027 cyclic nucleotide-binding domain protein_id AT1G01710.1p transcript_id AT1G01710.1 protein_id AT1G01710.1p transcript_id AT1G01710.1
At1g01720	chr1:000268471	0	W/268471-268630,268717-268994,269083-269514	gene_syn ANAC002, T1N6.12, T1N6_12 gene ATAF1 function belongs to a large family of putative transcriptional activators with NAC domain. Transcript level increases in response to wounding.  product ATAF1; transcription factor go_process development|GO:0007275||ISS go_function transcription factor activity|GO:0003700|11118137|ISS go_component cellular component unknown|GO:0008372||ND go_process response to wounding|GO:0009611|11516145|IEP go_function transcriptional activator activity|GO:0016563|11516145|TAS note no apical meristem (NAM) family protein, contains Pfam PF02365: No apical meristem (NAM) domain; similar to NAC domain protein NAM GB:AAD17313 GI:4325282 from (Arabidopsis thaliana) protein_id AT1G01720.1p transcript_id AT1G01720.1 protein_id AT1G01720.1p transcript_id AT1G01720.1
At1g01725	chr1:000270016	0	C/270016-270090,270622-270735	product unknown protein go_component endomembrane system|GO:0012505||IEA go_process biological process unknown|GO:0000004||ND go_function molecular function unknown|GO:0005554||ND note expressed protein protein_id AT1G01725.1p transcript_id AT1G01725.1 protein_id AT1G01725.1p transcript_id AT1G01725.1
At1g01730	chr1:000271002	0	W/271002-271289,271379-271433,271541-271872	gene_syn T1N6.14, T1N6_14  product unknown protein go_component chloroplast|GO:0009507||IEA go_process biological process unknown|GO:0000004||ND go_function molecular function unknown|GO:0005554||ND note expressed protein protein_id AT1G01730.1p transcript_id AT1G01730.1 protein_id AT1G01730.1p transcript_id AT1G01730.1
At1g01740	chr1:000272111	0	C/272111-272362,272445-272555,272651-272983,273064-273149,273234-273339,273429-273562,273653-273788,273863-274083,274167-274239	gene_syn T1N6.15, T1N6_15  product ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase go_process protein amino acid phosphorylation|GO:0006468||IEA go_process N-terminal protein myristoylation|GO:0006499|12912986|IEA go_function protein kinase activity|GO:0004672||IEA go_function protein serine/threonine kinase activity|GO:0004674||IEA go_function protein-tyrosine kinase activity|GO:0004713||IEA go_function ATP binding|GO:0005524||IEA go_function kinase activity|GO:0016301||ISS note protein kinase family protein, low similarity to protein kinase (Arabidopsis thaliana) GI:2852449; contains Pfam profile: PF00069 Protein kinase domain protein_id AT1G01740.1p transcript_id AT1G01740.1 protein_id AT1G01740.1p transcript_id AT1G01740.1
At1g01750	chr1:000275528	0	W/275528-275530,275632-275897,275973-276126	gene_syn T1N6.16, T1N6_16  product actin binding go_component intracellular|GO:0005622||IEA go_component intracellular|GO:0005622||ISS go_process biological process unknown|GO:0000004||ND go_function actin binding|GO:0003779||IEA note actin-depolymerizing factor, putative, strong similarity to SP|P30175 Actin-depolymerizing factor (ADF) {Lilium longiflorum}; contains Pfam profile PF00241: Cofilin/tropomyosin-type actin-binding protein protein_id AT1G01750.1p transcript_id AT1G01750.1 protein_id AT1G01750.1p transcript_id AT1G01750.1
At1g01760	chr1:000276866	0	C/276866-276989,277077-277153,277232-277401,277493-277606,277717-277803,277929-278033,278085-278252,278316-278448	gene_syn T1N6.17, T1N6_17  product RNA binding / adenosine deaminase go_component cellular component unknown|GO:0008372||ND go_process RNA processing|GO:0006396||IEA go_process RNA processing|GO:0006396||ISS go_function RNA binding|GO:0003723||IEA go_function RNA binding|GO:0003723||ISS go_function adenosine deaminase activity|GO:0004000||IEA go_function adenosine deaminase activity|GO:0004000||ISS note adenosine-deaminase family / editase family, similar to double-stranded RNA-specific editase GB:AAF69673 GI:7770275 from (Danio rerio) protein_id AT1G01760.1p transcript_id AT1G01760.1 protein_id AT1G01760.1p transcript_id AT1G01760.1
At1g01770	chr1:000278759	0	W/278759-278809,278887-279088,279166-279240,279327-279425,279536-279576,279797-279910,279974-280088,280180-280370,280449-280568,280657-280737,280889-281121,281309-281348,281438-281536,281759-282189,282484-282490	gene_syn T1N6.18, T1N6_18  product unknown protein go_component cellular component unknown|GO:0008372||ND go_process biological process unknown|GO:0000004||ND note expressed protein protein_id AT1G01770.1p transcript_id AT1G01770.1 protein_id AT1G01770.1p transcript_id AT1G01770.1
At1g01780	chr1:000282919	0	W/282919-283053,283132-283231,283314-283336,283444-283533,283813-284082	gene_syn T1N6.19, T1N6_19  product zinc ion binding go_component cellular component unknown|GO:0008372||ND go_process biological process unknown|GO:0000004||ND go_function zinc ion binding|GO:0008270||IEA note LIM domain-containing protein, similar to PGPS/D1 (Petunia x hybrida) GI:4105772, LIM domain protein PLIM1 (Nicotiana tabacum) GI:5932418; contains Pfam profile PF00412: LIM domain protein_id AT1G01780.1p transcript_id AT1G01780.1 protein_id AT1G01780.1p transcript_id AT1G01780.1
At1g01790	chr1:000286606	0	W/286606-286623,286717-286807,286997-287133,287221-287280,287395-287514,287642-287710,287789-287854,288087-288176,288401-288505,288593-288721,288882-289091,289237-289386,289539-289592,289718-289776,290028-290094,290170-290346,290439-290495,290578-290652,290747-290869	gene_syn ATKEA1, K EFFLUX ANTIPORTER 1, T1N6.21, T1N6_21 gene KEA1 function K efflux antiporter KEA1 mRNA, complete cds  product KEA1 (K EFFLUX ANTIPORTER 1); potassium:hydrogen antiporter go_component cellular component unknown|GO:0008372|11500563|TAS go_process cation transport|GO:0006812||IEA go_process potassium ion transport|GO:0006813||IEA go_process regulation of pH|GO:0006885||IEA go_function potassium:hydrogen antiporter activity|GO:0015386||ISS go_function potassium ion transporter activity|GO:0015079||ISS note K+ efflux antiporter, putative (KEA1), identical to GB:AAD01191 GI:4101473 from ( Arabidopsis thaliana); Monovalent cation:proton antiporter family 2 (CPA2 family) member, PMID:11500563 protein_id AT1G01790.1p transcript_id AT1G01790.1 protein_id AT1G01790.1p transcript_id AT1G01790.1
At1g01800	chr1:000293396	0	W/293396-293409,293500-293752,294055-294120,294210-294386,294511-294888	gene_syn T1N6.22, T1N6_22  product oxidoreductase go_component cellular component unknown|GO:0008372||ND go_process metabolism|GO:0008152||IEA go_function oxidoreductase activity|GO:0016491||IEA go_function oxidoreductase activity|GO:0016491||ISS note short-chain dehydrogenase/reductase (SDR) family protein, similar to carbonyl reductase GI:1049108 from (Mus musculus) protein_id AT1G01800.1p transcript_id AT1G01800.1 protein_id AT1G01800.1p transcript_id AT1G01800.1
At1g01810	chr1:000295242	0	W/295242-295724	gene_syn T1N6.23, T1N6_23  product unknown protein go_component mitochondrion|GO:0005739||IEA go_process biological process unknown|GO:0000004||ND note expressed protein protein_id AT1G01810.1p transcript_id AT1G01810.1 protein_id AT1G01810.1p transcript_id AT1G01810.1
At1g01820	chr1:000296213	0	C/296213-296248,296362-296535,296626-296700,296782-296862,296951-297025,297101-297175,297532-297723	gene_syn T1N6.24, T1N6_24  product unknown protein go_component peroxisomal membrane|GO:0005778||IEA go_component peroxisomal membrane|GO:0005778||ISS go_process peroxisome fission|GO:0016559||IEA go_process peroxisome fission|GO:0016559||ISS go_function molecular function unknown|GO:0005554||ND note peroxisomal biogenesis factor 11 family protein / PEX11 family protein, contains Pfam PF05648: Peroxisomal biogenesis factor 11 (PEX11) protein_id AT1G01820.1p transcript_id AT1G01820.1 protein_id AT1G01820.1p transcript_id AT1G01820.1
At1g01830	chr1:000298717	0	C/298717-300441	gene_syn T1N6.25, T1N6_25  product unknown protein go_component cellular component unknown|GO:0008372||ND note armadillo/beta-catenin repeat family protein, armadillo/beta-catenin-like repeats, Pfam:PF00514 protein_id AT1G01830.1p transcript_id AT1G01830.1 protein_id AT1G01830.1p transcript_id AT1G01830.1
At1g01840	chr1:000303650	0	W/303650-304108	gene_syn T1N6.26, T1N6_26  product unknown protein go_component chloroplast|GO:0009507||IEA go_process biological process unknown|GO:0000004||ND go_function molecular function unknown|GO:0005554||ND note expressed protein protein_id AT1G01840.1p transcript_id AT1G01840.1 protein_id AT1G01840.1p transcript_id AT1G01840.1
At1g01860	chr1:000304439	0	C/304439-304504,304697-304807,304880-304963,305038-305090,305174-305258,305347-305442,305547-305702,305785-305934,306045-306275	gene_syn DIMETHYLADENOSINE TRANSFERASE, PALEFACE 1 gene PFC1 function dimethyladenosine transferase  product PFC1 (PALEFACE 1) go_component chloroplast|GO:0009507||IEA go_process response to cold|GO:0009409|9596631|IMP go_function mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity|GO:0016422|9596631|ISS note dimethyladenosine transferase (PFC1), identical to dimethyladenosine transferase GB:AAC09322 GI:3005590 from (Arabidopsis thaliana) protein_id AT1G01860.1p transcript_id AT1G01860.1 protein_id AT1G01860.1p transcript_id AT1G01860.1
At1g01870	chr1:000306384	0	W/306384-306456	gene_syn 51779.TRNA-VAL-1 product pre-tRNA go_process translational elongation|GO:0006414|8980477|TAS go_function triplet codon-amino acid adaptor activity|GO:0030533|8980477|TAS note tRNA-Val (anticodon: TAC) 
At1g01880	chr1:000306558	0	C/306558-306800,306893-307073,307161-307359,307441-307805,307889-308070,308148-308318,308397-308573,308797-308991	gene_syn F22M8.2, F22M8_2  product DNA binding / nuclease go_component mitochondrion|GO:0005739||IEA go_process DNA repair|GO:0006281||IEA go_process DNA repair|GO:0006281||ISS go_function DNA binding|GO:0003677||IEA go_function nuclease activity|GO:0004518||IEA go_function nuclease activity|GO:0004518||ISS note DNA repair protein, putative, similar to Swiss-Prot:P28706 DNA repair protein rad13 (Schizosaccharomyces pombe); similar to UV hypersensitive protein (Arabidopsis thaliana) gi|13649704|gb|AAK37472 protein_id AT1G01880.1p transcript_id AT1G01880.1 protein_id AT1G01880.1p transcript_id AT1G01880.1
At1g01890	chr1:000309275	0	C/309275-309347	gene_syn 51779.TRNA-LYS-1 product pre-tRNA go_process translational elongation|GO:0006414|8980477|TAS go_function triplet codon-amino acid adaptor activity|GO:0030533|8980477|TAS note tRNA-Lys (anticodon: CTT) 
At1g01900	chr1:000310332	0	W/310332-310981,311337-313011	gene_syn F22M8.3, F22M8_3  product peptidase/ subtilase go_component endomembrane system|GO:0012505||IEA go_process proteolysis|GO:0006508||IEA go_process proteolysis|GO:0006508||ISS go_function subtilase activity|GO:0004289||IEA go_function subtilase activity|GO:0004289||ISS go_function peptidase activity|GO:0008233||IEA note subtilase family protein, contains similarity to cucumisin-like serine protease GB:AAC18851 GI:3176874 from (Arabidopsis thaliana) protein_id AT1G01900.1p transcript_id AT1G01900.1 protein_id AT1G01900.1p transcript_id AT1G01900.1
At1g01910	chr1:000313595	0	C/313595-313759,313880-313995,314087-314225,314441-314551,314652-314802,314891-315015,315577-315831	gene_syn F22M8.4, F22M8_4  product ATP binding go_component membrane|GO:0016020||IEA go_component membrane|GO:0016020||ISS go_process anion transport|GO:0006820||IEA go_process anion transport|GO:0006820||ISS go_function ATP binding|GO:0005524||IEA go_function ATP binding|GO:0005524||ISS note anion-transporting ATPase, putative, similar to SP|O43681 Arsenical pump-driving ATPase (EC 3.6.3.16) (Arsenite-translocating ATPase) (Arsenical resistance ATPase) (Arsenite-transporting ATPase) (ARSA) (ASNA-I) {Homo sapiens}; contains Pfam profile PF02374: Anion-transporting ATPase protein_id AT1G01910.1p transcript_id AT1G01910.1 protein_id AT1G01910.1p transcript_id AT1G01910.1
At1g01910	chr1:000313746	0	C/313746-313752,313872-313995,314087-314225,314441-314551,314652-314802,314891-315015,315577-315831	gene_syn F22M8.4, F22M8_4  product ATP binding go_component membrane|GO:0016020||IEA go_component membrane|GO:0016020||ISS go_process anion transport|GO:0006820||IEA go_process anion transport|GO:0006820||ISS go_function ATP binding|GO:0005524||IEA go_function ATP binding|GO:0005524||ISS note similar to anion-transporting ATPase family protein [Arabidopsis thaliana] (TAIR:At5g60730.1); similar to ENSANGP00000018739 [Anopheles gambiae str. PEST] (GB:XP_315798.2); contains InterPro domain Anion-transporting ATPase (InterPro:IPR003348) protein_id AT1G01910.3p transcript_id AT1G01910.3 protein_id AT1G01910.3p transcript_id AT1G01910.3
At1g01920	chr1:000316204	0	W/316204-316257,316344-316440,316539-316713,316792-316897,317008-317090,317167-317193,317294-317439,317553-317642,317765-317845,317979-318040,318145-318201,318362-318433,318565-318813,318986-319101,319204-319296,319372-319507	gene_syn F22M8.5, F22M8_5  product unknown protein go_component cellular component unknown|GO:0008372||ND go_process biological process unknown|GO:0000004||ND go_function molecular function unknown|GO:0005554||ND note similar to ribulose-1,5 bisphosphate carboxylase oxygenase large subunit N-methyltransferase, putative [Arabidopsis thaliana] (TAIR:At1g14030.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:NP_910361.1); contains InterPro domain Nuclear protein SET (InterPro:IPR001214) protein_id AT1G01920.2p transcript_id AT1G01920.2 protein_id AT1G01920.2p transcript_id AT1G01920.2
At1g01920	chr1:000316204	0	W/316204-316257,316344-316440,316539-316713,316792-316897,317008-317090,317167-317193,317294-317456,317561-317642,317765-317845,317979-318040,318145-318201,318296-318433,318565-318813,318986-319101,319204-319296,319372-319507	gene_syn F22M8.5, F22M8_5  product unknown protein go_component cellular component unknown|GO:0008372||ND go_process biological process unknown|GO:0000004||ND go_function molecular function unknown|GO:0005554||ND note SET domain-containing protein, low similarity to SP|Q43088 Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N- methyltransferase, chloroplast precursor (EC 2.1.1.127) {Pisum sativum}; contains Pfam profile PF00856: SET domain protein_id AT1G01920.1p transcript_id AT1G01920.1 protein_id AT1G01920.1p transcript_id AT1G01920.1
At1g01930	chr1:000320041	0	C/320041-320145,320252-320296,320380-320457,320769-321422,321751-321865,321958-322406,322513-322809	gene_syn F22M8.6, F22M8_6  product unknown protein go_process biological process unknown|GO:0000004||ND note zinc finger protein-related, contains Pfam PF00023: Ankyrin repeat; contains Pfam PF00096: Zinc finger, C2H2 type domain and Prosite PS00028: Zinc finger, C2H2 type, domain protein_id AT1G01930.1p transcript_id AT1G01930.1 protein_id AT1G01930.1p transcript_id AT1G01930.1
At1g01940	chr1:000323082	0	W/323082-323084,323208-323282,323679-323840,324258-324416,324636-324719	gene_syn F22M8.7, F22M8_7  product peptidyl-prolyl cis-trans isomerase go_component cellular component unknown|GO:0008372||ND go_process protein folding|GO:0006457||IEA go_process protein folding|GO:0006457||ISS go_function peptidyl-prolyl cis-trans isomerase activity|GO:0003755||ISS note peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein, contains Pfam domain, PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type protein_id AT1G01940.1p transcript_id AT1G01940.1 protein_id AT1G01940.1p transcript_id AT1G01940.1
At1g01950	chr1:000325473	0	W/325473-325641,325913-326013,326106-326228,326332-326517,326594-326815,326931-327084,327237-327386,327488-327576,327663-327866,328000-328107,328188-328322,328424-328555,328898-329030,329119-329211,329311-329436,329573-329698,329781-329924,330027-330155,330243-330403	gene_syn F22M8.8, F22M8_8  product ATP binding / microtubule motor go_component microtubule associated complex|GO:0005875||IEA go_component chloroplast|GO:0009507||IEA go_process microtubule-based movement|GO:0007018||IEA go_function microtubule motor activity|GO:0003777||IEA go_function microtubule motor activity|GO:0003777||ISS go_function ATP binding|GO:0005524||IEA note armadillo/beta-catenin repeat family protein / kinesin motor family protein, similar to kinesin-like protein GB:CAB41097 GI:5541717 from (Arabidopsis thaliana); contains Pfam profiles PF00225: Kinesin motor domain, PF00514: Armadillo/beta-catenin-like repeat protein_id AT1G01950.1p transcript_id AT1G01950.1 protein_id AT1G01950.1p transcript_id AT1G01950.1
At1g01960	chr1:000330830	0	C/330830-331423,331534-332183,332276-332633,332724-333045,333129-333628,333905-334178,334471-334763,334899-335321,335419-335773,335916-336233,336417-337582	gene_syn F22M8.9, F22M8_9  product guanyl-nucleotide exchange factor go_component cellular component unknown|GO:0008372||ND go_process biological process unknown|GO:0000004||ND go_function guanyl-nucleotide exchange factor activity|GO:0005085||ISS note guanine nucleotide exchange family protein, similar to guanine nucleotide exchange factor (Homo sapiens) GI:5456754; contains Pfam profile PF01369: Sec7 domain protein_id AT1G01960.1p transcript_id AT1G01960.1 protein_id AT1G01960.1p transcript_id AT1G01960.1
At1g01970	chr1:000338538	0	W/338538-338987,339126-339905	gene_syn F22M8.10, F22M8_10  product unknown protein go_component mitochondrion|GO:0005739||IEA go_process biological process unknown|GO:0000004||ND go_function molecular function unknown|GO:0005554||ND note pentatricopeptide (PPR) repeat-containing protein, low similarity to 67 kD chloroplastic RNA-binding protein RSP67.2 (Raphanus sativus) GI:9755888; contains Pfam profile PF01535: PPR repeat protein_id AT1G01970.1p transcript_id AT1G01970.1 protein_id AT1G01970.1p transcript_id AT1G01970.1
At1g01980	chr1:000340374	0	C/340374-341999	gene_syn F22M8.11, F22M8_11, SEC1A gene ATSEC1A function member of Reticuline oxidase-like family  product ATSEC1A; electron carrier go_component endomembrane system|GO:0012505||IEA go_process electron transport|GO:0006118||IEA go_function electron carrier activity|GO:0009055||ISS note FAD-binding domain-containing protein, similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) (Eschscholzia californica); contains PF01565 FAD binding domain protein_id AT1G01980.1p transcript_id AT1G01980.1 protein_id AT1G01980.1p transcript_id AT1G01980.1
At1g01990	chr1:000343462	0	C/343462-344199	gene_syn F22M8.12, F22M8_12  product unknown protein go_component mitochondrion|GO:0005739||IEA go_process biological process unknown|GO:0000004||ND go_function molecular function unknown|GO:0005554||ND note expressed protein protein_id AT1G01990.1p transcript_id AT1G01990.1 protein_id AT1G01990.1p transcript_id AT1G01990.1
At1g02000	chr1:000346052	0	W/346052-347356	gene_syn F22M8.13, F22M8_13, UDP-D-GLUCURONATE 4-EPIMERASE 2 gene GAE2 function UDP-D-glucuronate 4-epimerase  product GAE2 (UDP-D-GLUCURONATE 4-EPIMERASE 2); NAD binding / catalytic go_component cellular component unknown|GO:0008372||ND go_process nucleotide-sugar metabolism|GO:0009225||IEA go_process nucleotide-sugar metabolism|GO:0009225||ISS go_function catalytic activity|GO:0003824||IEA go_function catalytic activity|GO:0003824||ISS go_function NAD binding|GO:0051287||IEA note NAD-dependent epimerase/dehydratase family protein, similar to nucleotide sugar epimerase from Vibrio vulnificus GI:3093975 (PID:g3093975), WbnF (Escherichia coli) GI:5739472, CAPI protein {Staphylococcus aureus} SP|P39858; contains Pfam profile PF01370 NAD dependent epimerase/dehydratase family protein_id AT1G02000.1p transcript_id AT1G02000.1 protein_id AT1G02000.1p transcript_id AT1G02000.1
At1g02010	chr1:000348046	0	W/348046-348127,348212-348267,348373-348454,348562-348640,348735-348785,348880-348976,349067-349099,349238-349366,349550-349720,349803-349886,350049-350147,350226-350296,350474-350570,350658-350783,350871-350966,351044-351160,351252-351329,351412-351699	gene SEC1A function member of KEULE Gene Family  product SEC1A; protein transporter go_component cellular component unknown|GO:0008372||ND go_process vesicle docking during exocytosis|GO:0006904||IEA go_process protein secretion|GO:0009306||ISS go_process vesicle-mediated transport|GO:0016192||IEA go_function protein transporter activity|GO:0008565||ISS note similar to cytokinesis-related Sec1 protein (KEULE) [Arabidopsis thaliana] (TAIR:At1g12360.1); similar to cytokinesis-related Sec1 protein, putative [Arabidopsis thaliana] (TAIR:At4g12120.1); similar to putative SNARE-interacting protein KEULE [Oryza sativa (japonica cultivar-group)] (GB:BAD68882.1); similar to OSJNBa0032B23.7 [Oryza sativa (japonica cultivar-group)] (GB:XP_471317.1); contains InterPro domain Sec1-like protein (InterPro:IPR001619) protein_id AT1G02010.1p transcript_id AT1G02010.1 protein_id AT1G02010.1p transcript_id AT1G02010.1
At1g02020	chr1:000352842	0	C/352842-353162,353238-354845	gene_syn T7I23.2, T7I23_2  product oxidoreductase/ oxidoreductase, acting on NADH or NADPH, nitrogenous group as acceptor go_component chloroplast|GO:0009507||IEA go_process electron transport|GO:0006118||IEA go_process metabolism|GO:0008152||ISS go_function oxidoreductase activity|GO:0016491||IEA go_function oxidoreductase activity, acting on NADH or NADPH, nitrogenous group as acceptor|GO:0016657||ISS note nitroreductase family protein, contains Pfam PF00881: nitroreductase family protein profile; contains Prosite PS00343: Gram-positive cocci surface proteins 'anchoring' hexapeptide protein_id AT1G02020.1p transcript_id AT1G02020.1 protein_id AT1G02020.1p transcript_id AT1G02020.1
At1g02020	chr1:000353214	0	C/353214-354845	gene_syn T7I23.2, T7I23_2  product oxidoreductase/ oxidoreductase, acting on NADH or NADPH, nitrogenous group as acceptor go_component chloroplast|GO:0009507||IEA go_process electron transport|GO:0006118||IEA go_process metabolism|GO:0008152||ISS go_function oxidoreductase activity|GO:0016491||IEA go_function oxidoreductase activity, acting on NADH or NADPH, nitrogenous group as acceptor|GO:0016657||ISS note nitroreductase family protein, contains Pfam PF00881: nitroreductase family protein profile; contains Prosite PS00343: Gram-positive cocci surface proteins 'anchoring' hexapeptide protein_id AT1G02020.2p transcript_id AT1G02020.2 protein_id AT1G02020.2p transcript_id AT1G02020.2
At1g02030	chr1:000355385	0	C/355385-356188	gene_syn T7I23.3, T7I23_3  product nucleic acid binding / transcription factor/ zinc ion binding go_component nucleus|GO:0005634||IEA go_component mitochondrion|GO:0005739||IEA go_process regulation of transcription|GO:0045449|11118137|TAS go_function nucleic acid binding|GO:0003676||ISS go_function transcription factor activity|GO:0003700|11118137|ISS go_function zinc ion binding|GO:0008270||ISS note zinc finger (C2H2 type) family protein, identical to C2H2 zinc finger protein ZAT1 (Arabidopsis thaliana) gi|1418321|emb|CAA67227; contains Pfam domain, PF00096: Zinc finger, C2H2 type protein_id AT1G02030.1p transcript_id AT1G02030.1 protein_id AT1G02030.1p transcript_id AT1G02030.1
At1g02040	chr1:000358104	0	C/358104-359078	gene_syn T7I23.24, T7I23_24  product nucleic acid binding / transcription factor/ zinc ion binding go_component nucleus|GO:0005634||IEA go_function nucleic acid binding|GO:0003676||ISS go_function transcription factor activity|GO:0003700|11118137|ISS go_function zinc ion binding|GO:0008270||ISS note zinc finger (C2H2 type) family protein, contains Pfam profile: PF00096 zinc finger, C2H2 type protein_id AT1G02040.1p transcript_id AT1G02040.1 protein_id AT1G02040.1p transcript_id AT1G02040.1
At1g02050	chr1:000359164	0	C/359164-360149,360240-360441	gene_syn T7I23.4, T7I23_4  product acyltransferase go_component mitochondrion|GO:0005739||IEA go_process biosynthesis|GO:0009058||IEA go_process phenylpropanoid biosynthesis|GO:0009699||ISS go_function acyltransferase activity|GO:0008415||IEA note chalcone and stilbene synthase family protein, Similar to rice chalcone synthase homolog, gp|U90341|2507617 and anther specific protein, gp|Y14507|2326772 protein_id AT1G02050.1p transcript_id AT1G02050.1 protein_id AT1G02050.1p transcript_id AT1G02050.1
At1g02060	chr1:000360918	0	C/360918-363050	gene_syn T7I23.14, T7I23_14  product unknown protein go_component chloroplast|GO:0009507||IEA go_process biological process unknown|GO:0000004||ND go_function molecular function unknown|GO:0005554||ND note pentatricopeptide (PPR) repeat-containing protein, contains Pfam profile PF01535: PPR repeat protein_id AT1G02060.1p transcript_id AT1G02060.1 protein_id AT1G02060.1p transcript_id AT1G02060.1
At1g02065	chr1:000365625	0	W/365625-366325,366723-366859,366986-367149	gene_syn SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8 gene SPL8 function Encodes an SBP-box gene, a member of the SPL gene family. Mutants are affected in micro- and megasporogenesis, trichome formation on sepals, and stamen filament elongation.  product SPL8 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8); DNA binding go_component nucleus|GO:0005634||ISS go_function DNA binding|GO:0003677||ISS go_component nucleus|GO:0005634|12671094|ISS go_process megasporogenesis|GO:0009554|12671094|IMP go_process microsporogenesis|GO:0009556|12671094|IMP go_function DNA binding|GO:0003677|12671094|ISS note squamosa promoter-binding protein-like 8 (SPL8), identical to squamosa promoter binding protein-like 8 (Arabidopsis thaliana) GI:5931679; contains Pfam profile PF03110: SBP domain protein_id AT1G02065.1p transcript_id AT1G02065.1 protein_id AT1G02065.1p transcript_id AT1G02065.1
At1g02065	chr1:000365625	0	W/365625-366365	gene_syn SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8 gene SPL8 function Encodes an SBP-box gene, a member of the SPL gene family. Mutants are affected in micro- and megasporogenesis, trichome formation on sepals, and stamen filament elongation.  product SPL8 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8); DNA binding go_component nucleus|GO:0005634||ISS go_function DNA binding|GO:0003677||ISS go_component nucleus|GO:0005634|12671094|ISS go_process megasporogenesis|GO:0009554|12671094|IMP go_process microsporogenesis|GO:0009556|12671094|IMP go_function DNA binding|GO:0003677|12671094|ISS note squamosa promoter-binding protein-like 8 (SPL8), identical to squamosa promoter binding protein-like 8 (Arabidopsis thaliana) GI:5931679; contains Pfam profile PF03110: SBP domain protein_id AT1G02065.2p transcript_id AT1G02065.2 protein_id AT1G02065.2p transcript_id AT1G02065.2
At1g02070	chr1:000370445	0	C/370445-370751,370859-370947	gene_syn T7I23.30, T7I23_30  product unknown protein go_component cellular component unknown|GO:0008372||ND note expressed protein protein_id AT1G02070.1p transcript_id AT1G02070.1 protein_id AT1G02070.1p transcript_id AT1G02070.1
At1g02080	chr1:000373694	0	W/373694-373786,373892-374189,374272-374500,374583-374922,375122-375238,375325-375453,375528-375719,375808-376002,376114-376251,376352-376474,376562-376815,376925-377028,377211-377305,377391-377615,377881-378036,378119-378191,378298-378365,378504-378649,378746-378854,378943-379089,379183-379230,379305-379433,379528-379770,379866-380003,380089-380174,380270-380375,380602-380697,380846-380998,381150-381332,381405-381634,381730-381832,381912-382040,382127-382171,382373-382567,382803-382929,383030-383130,383395-383529,383608-383688,384084-384230,384318-384449,384558-384605,384694-384840,384908-384969,385171-385324,385432-385623,385713-385817,385909-386043,386133-386333,386428-386682	gene_syn T7I23.15, T7I23_15  product transcription regulator go_function transcription regulator activity|GO:0030528||ISS note transcriptional regulator-related, contains Pfam PF04054: CCR4-Not complex component, Not1; contains TIGRFAM TIGR01612: reticulocyte binding protein; similar to General negative regulator of transcription subunit 1 (SP:P25655) {Saccharomyces cerevisiae}; Location of ESTs gb|T44328 and gb|AA395265 protein_id AT1G02080.1p transcript_id AT1G02080.1 protein_id AT1G02080.1p transcript_id AT1G02080.1
At1g02090	chr1:000387479	0	C/387479-387503,387584-387672,388268-388406,388539-388609,388716-388760,388851-388940,389050-389138,389226-389301,389410-389568	gene_syn CONSTITUTIVE PHOTOMORPHOGENIC 15, CSN7, FUS5, FUSCA 5, T7I23.25, T7I23_25 gene FUS5 function encodes a phosphoprotein that is a subunit of the COP9 signalosome. Mutants exhibit constitutive photomorphogenic phenotype.  product FUS5 (FUSCA 5); MAP kinase kinase go_component nucleus|GO:0005634|10330469|ISS go_component signalosome complex|GO:0008180|11019806|TAS go_process photomorphogenesis|GO:0009640|11019806|TAS go_function MAP kinase kinase activity|GO:0004708|10330469|ISS go_component signalosome complex|GO:0008180|9707402|IPI note COP9 signalosome complex subunit 7ii / CSN complex subunit 7ii (CSN7) (COP15) / FUSCA protein (FUS5), FUSCA5, CSN7, COP15; identical to CSN complex subunit 7ii (Arabidopsis thaliana) GI:18056671, FUS5 protein of the COP9 complex GI:3288823; identical to cDNA CSN complex subunit CSN7, alternatively spliced protein_id AT1G02090.1p transcript_id AT1G02090.1 protein_id AT1G02090.1p transcript_id AT1G02090.1
At1g02090	chr1:000387647	0	C/387647-387655,388268-388406,388539-388609,388716-388760,388851-388940,389050-389138,389226-389301,389410-389568	gene_syn CONSTITUTIVE PHOTOMORPHOGENIC 15, CSN7, FUS5, FUSCA 5, T7I23.25, T7I23_25 gene FUS5 function encodes a phosphoprotein that is a subunit of the COP9 signalosome. Mutants exhibit constitutive photomorphogenic phenotype.  product FUS5 (FUSCA 5); MAP kinase kinase go_component nucleus|GO:0005634|10330469|ISS go_component signalosome complex|GO:0008180|11019806|TAS go_process photomorphogenesis|GO:0009640|11019806|TAS go_function MAP kinase kinase activity|GO:0004708|10330469|ISS go_component signalosome complex|GO:0008180|9707402|IPI note COP9 signalosome complex subunit 7ii / CSN complex subunit 7ii (CSN7) (COP15) / FUSCA protein (FUS5), FUSCA5, CSN7, COP15; identical to CSN complex subunit 7ii (Arabidopsis thaliana) GI:18056671, FUS5 protein of the COP9 complex GI:3288823; identical to cDNA CSN complex subunit CSN7, alternatively spliced protein_id AT1G02090.2p transcript_id AT1G02090.2 protein_id AT1G02090.2p transcript_id AT1G02090.2
At1g02090	chr1:000388223	0	C/388223-388406,388539-388609,388716-388760,388851-388940,389050-389138,389226-389301,389410-389568	gene_syn CONSTITUTIVE PHOTOMORPHOGENIC 15, CSN7, FUS5, FUSCA 5, T7I23.25, T7I23_25 gene FUS5 function encodes a phosphoprotein that is a subunit of the COP9 signalosome. Mutants exhibit constitutive photomorphogenic phenotype.  product FUS5 (FUSCA 5); MAP kinase kinase go_component nucleus|GO:0005634|10330469|ISS go_component signalosome complex|GO:0008180|11019806|TAS go_process photomorphogenesis|GO:0009640|11019806|TAS go_function MAP kinase kinase activity|GO:0004708|10330469|ISS go_component signalosome complex|GO:0008180|9707402|IPI note COP9 signalosome complex subunit 7ii / CSN complex subunit 7ii (CSN7) (COP15) / FUSCA protein (FUS5), FUSCA5, CSN7, COP15; identical to CSN complex subunit 7ii (Arabidopsis thaliana) GI:18056671, FUS5 protein of the COP9 complex GI:3288823; identical to cDNA CSN complex subunit CSN7, alternatively spliced protein_id AT1G02090.3p transcript_id AT1G02090.3 protein_id AT1G02090.3p transcript_id AT1G02090.3
At1g02100	chr1:000389876	0	W/389876-389943,390037-390250,390352-390399,390483-390564,390762-390864,391003-391123,391216-391263,391458-391541,391652-391716,392021-392072,392262-392300,392374-392448	gene_syn T7I23.16, T7I23_16  product methyltransferase go_component cellular component unknown|GO:0008372||ND go_process biological process unknown|GO:0000004||ND go_function methyltransferase activity|GO:0008168||ISS note leucine carboxyl methyltransferase family protein, contains Pfam PF04072: Leucine carboxyl methyltransferase domain; similar to Leucine carboxyl methyltransferase (Protein-leucine O- methyltransferase) (CGI-68) (SP:Q9UIC8) {Homo sapiens} protein_id AT1G02100.1p transcript_id AT1G02100.1 protein_id AT1G02100.1p transcript_id AT1G02100.1
At1g02100	chr1:000389876	0	W/389876-389943,390037-390250,390352-390399,390483-390564,390762-390864,391003-391123,391216-391263,391458-391541,391652-391716,392021-392076,392262-392293	gene_syn T7I23.16, T7I23_16  product methyltransferase go_component cellular component unknown|GO:0008372||ND go_process biological process unknown|GO:0000004||ND go_function methyltransferase activity|GO:0008168||ISS note leucine carboxyl methyltransferase family protein, contains Pfam PF04072: Leucine carboxyl methyltransferase domain; similar to Leucine carboxyl methyltransferase (Protein-leucine O- methyltransferase) (CGI-68) (SP:Q9UIC8) {Homo sapiens} protein_id AT1G02100.2p transcript_id AT1G02100.2 protein_id AT1G02100.2p transcript_id AT1G02100.2
At1g02110	chr1:000392939	0	W/392939-393875,393966-394153,394228-394297,394370-394451,394672-395434	gene_syn T7I23.5, T7I23_5  product unknown protein go_component cellular component unknown|GO:0008372||ND go_process N-terminal protein myristoylation|GO:0006499|12912986|IDA go_function molecular function unknown|GO:0005554||ND note proline-rich family protein, contains proline-rich domain, INTERPRO:IPR000694 protein_id AT1G02110.1p transcript_id AT1G02110.1 protein_id AT1G02110.1p transcript_id AT1G02110.1
At1g02120	chr1:000395761	0	W/395761-395946,396029-396088,396167-396217,396291-396356,396439-396534,396609-396725,396793-396863,396941-397098,397703-397743,397877-397964,398065-398151,398292-398346,398460-398526,398614-398713,398905-398966,399068-399110,399182-399393,399484-399720	gene_syn T7I23.28, T7I23_28  product unknown protein go_component cellular component unknown|GO:0008372||ND note similar to C2 domain-containing protein / GRAM domain-containing protein [Arabidopsis thaliana] (TAIR:At3g59660.1); similar to unnamed protein product [Homo sapiens] (GB:BAC11289.1); contains InterPro domain GRAM domain (InterPro:IPR004182) protein_id AT1G02120.1p transcript_id AT1G02120.1 protein_id AT1G02120.1p transcript_id AT1G02120.1
At1g02130	chr1:000400350	0	C/400350-400446,400725-400828,400931-401086,401164-401235,401323-401370,401461-401508,401595-401667,401775-401788	gene_syn ARA5, ARABIDOPSIS RAS 5, T7I23.6, T7I23_6 gene ATRAB1B function Belongs to the Rab1 GTPase subfamily. This small GTP-binding protein is required in ER to Golgi transportation.  product ATRAB1B; GTP binding go_component endomembrane system|GO:0012505||IEA go_function GTP binding|GO:0005525||IEA go_function GTP binding|GO:0005525||ISS go_process ER to Golgi transport|GO:0006888|11090219|IDA go_process ER to Golgi transport|GO:0006888|11090219|IGI note Ras-related protein (ARA-5) / small GTP-binding protein, putative, identical to Ras-related protein ARA-5 SP:P28188 from (Arabidopsis thaliana) protein_id AT1G02130.1p transcript_id AT1G02130.1 protein_id AT1G02130.1p transcript_id AT1G02130.1
At1g02140	chr1:000403467	0	C/403467-403526,403771-403947,404186-404401	gene_syn T7I23.7, T7I23_7  product unknown protein go_component nucleus|GO:0005634||IEA go_component nucleus|GO:0005634||ISS go_process sex determination|GO:0007530||ISS go_function molecular function unknown|GO:0005554||ND note mago nashi family protein, similar to Mago Nashi, Genbank Accession Number U03559; contains Pfam PF02792: Mago nashi protein domain protein_id AT1G02140.1p transcript_id AT1G02140.1 protein_id AT1G02140.1p transcript_id AT1G02140.1
At1g02150	chr1:000408779	0	W/408779-409138,409219-410433	gene_syn T6A9.13  product unknown protein go_component mitochondrion|GO:0005739||IEA note pentatricopeptide (PPR) repeat-containing protein, low similiarity to DNA-binding protein (Triticum aestivum) GI:6958202; contains Pfam profile: PF01535 PPR repeat protein_id AT1G02150.1p transcript_id AT1G02150.1 protein_id AT1G02150.1p transcript_id AT1G02150.1
At1g02160	chr1:000410803	0	W/410803-410893,411177-411253,411336-411383	gene_syn T6A9.18  product unknown protein go_component cellular component unknown|GO:0008372||ND go_process biological process unknown|GO:0000004||ND go_function molecular function unknown|GO:0005554||ND note expressed protein protein_id AT1G02160.1p transcript_id AT1G02160.1 protein_id AT1G02160.1p transcript_id AT1G02160.1
At1g02170	chr1:000411883	0	W/411883-412258,412460-412790,412883-413003,413080-413295,413367-413426	gene_syn AMC1, ATMCPB1, LSD ONE LIKE 3, MCP1B, T6A9.24 gene LOL3 function LSD One Like 3  product LOL3 (LSD ONE LIKE 3); caspase/ cysteine-type endopeptidase go_component chloroplast|GO:0009507||IEA go_process proteolysis|GO:0006508||ISS go_process induction of apoptosis|GO:0006917|15691845|IDA go_function cysteine-type endopeptidase activity|GO:0004197|15691845|IDA go_function caspase activity|GO:0030693||ISS note latex-abundant family protein (AMC1) / caspase family protein, contains similarity to latex-abundant protein (Hevea brasiliensis) gb:AAD13216; contains Pfam profile PF00656: ICE-like protease (caspase) p20 domain protein_id AT1G02170.1p transcript_id AT1G02170.1 protein_id AT1G02170.1p transcript_id AT1G02170.1
At1g02180	chr1:000413619	0	C/413619-414217,414424-414505	gene_syn T6A9.14  product unknown protein go_component endomembrane system|GO:0012505||IEA go_process biological process unknown|GO:0000004||ND go_function molecular function unknown|GO:0005554||ND note ferredoxin-related, similar to Ferredoxin. (SP:O78510) (Cryptomonas phi) {Guillardia theta} protein_id AT1G02180.1p transcript_id AT1G02180.1 protein_id AT1G02180.1p transcript_id AT1G02180.1
At1g02190	chr1:000415154	0	W/415154-415670,415742-415961,416045-416435,416731-416838,416962-417162,417248-417520,417623-417796	gene_syn T6A9.15  product catalytic go_component mitochondrion|GO:0005739||IEA go_process metabolism|GO:0008152||IEA go_function catalytic activity|GO:0003824||IEA go_function catalytic activity|GO:0003824||ISS note CER1 protein, putative, similar to CER1 GI:1199467 and maize gl1 homolog (glossy1 locus) GI:1209703 from (Arabidopsis thaliana) protein_id AT1G02190.1p transcript_id AT1G02190.1 protein_id AT1G02190.1p transcript_id AT1G02190.1
At1g02190	chr1:000415154	0	W/415154-415670,415742-415961,416045-416435,416743-416838,416962-417162,417248-417520,417623-417796	gene_syn T6A9.15  product catalytic go_component mitochondrion|GO:0005739||IEA go_process metabolism|GO:0008152||IEA go_function catalytic activity|GO:0003824||IEA go_function catalytic activity|GO:0003824||ISS note CER1 protein, putative, similar to CER1 GI:1199467 and maize gl1 homolog (glossy1 locus) GI:1209703 from (Arabidopsis thaliana) protein_id AT1G02190.2p transcript_id AT1G02190.2 protein_id AT1G02190.2p transcript_id AT1G02190.2
At1g02205	chr1:000418818	0	W/418818-418877,418987-419210,419297-419529,419675-419894,420514-420889,420984-421091,421191-421391,421526-421633,421735-421908,421981-422154	gene_syn AT1G02200, CER1, ECERIFERUM 1, POSSIBLE ALDEHYDE DECARBONYLASE, T6A9.16 gene CER1 function Expression of the CER1 gene associated with production of stem epicuticular wax and pollen fertility. Biochemical studies showed that cer1 mutants are blocked in the conversion of stem wax C30 aldehydes to C29 alkanes, and they also lack the secondary alcohols and ketones. These suggested the CER1 protein is a aldehyde decarbonylase.  product CER1 (ECERIFERUM 1) go_process cuticle biosynthesis|GO:0042335|8718622|IMP go_component cellular component unknown|GO:0008372||ND go_process wax biosynthesis|GO:0010025|8718622|IMP go_process wax biosynthesis|GO:0010025||IMP go_function octadecanal decarbonylase activity|GO:0009924|8718622|IMP note CER1 protein, identical to maize gl1 homolog (glossy1 locus) GI:1209703 and CER1 GI:1199467 from (Arabidopsis thaliana) protein_id AT1G02205.2p transcript_id AT1G02205.2 protein_id AT1G02205.2p transcript_id AT1G02205.2
At1g02205	chr1:000418818	0	W/418818-418877,418987-419210,419297-419529,419675-419894,420514-420889,420984-421091,421191-421391,421526-421633,421735-421947	gene_syn AT1G02200, CER1, ECERIFERUM 1, POSSIBLE ALDEHYDE DECARBONYLASE, T6A9.16 gene CER1 function Expression of the CER1 gene associated with production of stem epicuticular wax and pollen fertility. Biochemical studies showed that cer1 mutants are blocked in the conversion of stem wax C30 aldehydes to C29 alkanes, and they also lack the secondary alcohols and ketones. These suggested the CER1 protein is a aldehyde decarbonylase.  product CER1 (ECERIFERUM 1) go_process cuticle biosynthesis|GO:0042335|8718622|IMP go_component cellular component unknown|GO:0008372||ND go_process wax biosynthesis|GO:0010025|8718622|IMP go_process wax biosynthesis|GO:0010025||IMP go_function octadecanal decarbonylase activity|GO:0009924|8718622|IMP note CER1 protein, identical to maize gl1 homolog (glossy1 locus) GI:1209703 and CER1 GI:1199467 from (Arabidopsis thaliana) protein_id AT1G02205.1p transcript_id AT1G02205.1 protein_id AT1G02205.1p transcript_id AT1G02205.1
At1g02210	chr1:000427548	0	C/427548-427811	gene_syn T6A9.33  product unknown protein go_component cellular component unknown|GO:0008372||ND go_process biological process unknown|GO:0000004||ND go_function molecular function unknown|GO:0005554||ND note regulator of shoot apical meristem-related, contains weak similarity to no apical meristem NAM (GI:1279640) (Petunia x hybrida) protein_id AT1G02210.1p transcript_id AT1G02210.1 protein_id AT1G02210.1p transcript_id AT1G02210.1
At1g02220	chr1:000428902	0	C/428902-429099,429248-429370,429462-429776,429851-429997,430069-430316,430414-430567	gene_syn ANAC003, T6A9.17 gene ANAC003  product ANAC003; transcription factor go_component cellular component unknown|GO:0008372||ND go_process development|GO:0007275||ISS go_function transcription factor activity|GO:0003700|11118137|ISS note no apical meristem (NAM) family protein, similar to NAC domain protein NAC2 (GI:15148914) {Phaseolus vulgaris}; similar to NAC domain protein NAC2 (GI:21554255) {Arabidopsis thaliana}; contains Pfam PF02365 : No apical meristem (NAM) protein protein_id AT1G02220.1p transcript_id AT1G02220.1 protein_id AT1G02220.1p transcript_id AT1G02220.1
At1g02230	chr1:000433031	0	C/433031-433698,435197-435323,435450-435563,435650-435850,435916-436128,436277-436539,436622-436775	gene_syn ANAC004, T6A9.19 gene ANAC004  product ANAC004; transcription factor go_component cellular component unknown|GO:0008372||ND go_process development|GO:0007275||ISS go_function transcription factor activity|GO:0003700|11118137|ISS note no apical meristem (NAM) family protein, contains Pfam PF02365: No apical meristem (NAM) protein protein_id AT1G02230.1p transcript_id AT1G02230.1 protein_id AT1G02230.1p transcript_id AT1G02230.1
At1g02250	chr1:000437951	0	C/437951-438106,438218-438334,438422-438679,438783-438887,439052-439314,439406-439559	gene_syn ANAC005, T6A9.20 gene ANAC005  product ANAC005; transcription factor go_component cellular component unknown|GO:0008372||ND go_process development|GO:0007275||ISS go_function transcription factor activity|GO:0003700|11118137|ISS note no apical meristem (NAM) family protein, contains Pfam PF02365 : No apical meristem (NAM) protein; similar to NAC1 (GI:21554126) (Arabidopsis thaliana) protein_id AT1G02250.1p transcript_id AT1G02250.1 protein_id AT1G02250.1p transcript_id AT1G02250.1
At1g02260	chr1:000440757	0	C/440757-441013,441136-441325,441398-442459	gene_syn T6A9.21  product transporter go_component integral to membrane|GO:0016021||ISS go_function transporter activity|GO:0005215||ISS note transmembrane protein, putative, similar to P protein (Melanocyte-specific transporter protein) (SP:Q04671) {Homo sapiens}; contains 8 transmembrane domains protein_id AT1G02260.1p transcript_id AT1G02260.1 protein_id AT1G02260.1p transcript_id AT1G02260.1
At1g02270	chr1:000443301	0	C/443301-443525,443629-443736,443979-444089,444258-444383,444489-444597,444683-444759,444846-445066,445454-445559,445648-445752,445844-445942,446030-446197	gene_syn T6A9.35  product calcium ion binding / catalytic go_component mitochondrion|GO:0005739||IEA go_function catalytic activity|GO:0003824||ISS go_function calcium ion binding|GO:0005509||IEA go_function calcium ion binding|GO:0005509||ISS note endonuclease/exonuclease/phosphatase family protein / calcium-binding EF hand family protein, contains Pfam profiles: PF03372 endonuclease/exonuclease/phosphatase family, PF00036 EF hand protein_id AT1G02270.1p transcript_id AT1G02270.1 protein_id AT1G02270.1p transcript_id AT1G02270.1
At1g02280	chr1:000448665	0	C/448665-448733,448812-448973,449055-449123,449225-449489,449714-449838,449939-450046,450151-450246	gene_syn ATTOC33, PLASTID PROTEIN IMPORT 1, PPI1, T6A9.32 gene TOC33 function Encodes a GTP-binding GTP-ase. Component of the chloroplast protein import machinery. Required for import of POR B into plastids.  product TOC33 (PLASTID PROTEIN IMPORT 1); GTP binding go_function GTP binding|GO:0005525||ISS go_component chloroplast outer membrane|GO:0009707|10998188|IDA go_process protein targeting to chloroplast|GO:0045036|9756470|TAS go_function GTPase activity|GO:0003924|12782294|IDA go_function protein binding|GO:0005515|15773849|IPI go_function GTP binding|GO:0005525|12782294|IDA note GTP-binding protein (TOC33), identical to atToc33 protein (GI:11557973) (Arabidopsis thaliana); Carboxyl-terminal end highly similar to GTP-binding protein SP:U43377, location of EST gb|AA394770 and gb|R30089; identical to cDNA for chloroplast atToc33 protein GI:11557972 protein_id AT1G02280.1p transcript_id AT1G02280.1 protein_id AT1G02280.1p transcript_id AT1G02280.1
At1g02290	chr1:000450646	0	C/450646-451977	gene_syn T6A9.31  product unknown protein go_component cellular component unknown|GO:0008372||ND go_process biological process unknown|GO:0000004||ND go_function molecular function unknown|GO:0005554||ND note expressed protein protein_id AT1G02290.1p transcript_id AT1G02290.1 protein_id AT1G02290.1p transcript_id AT1G02290.1
At1g02300	chr1:000453288	0	W/453288-453365,453594-453647,453730-453810,453907-454063,454197-454336,454415-454540,454622-454840,454927-455040,455112-455147,455242-455376	gene_syn T6A9.28, T7I23.12, T7I23_12  product cysteine-type endopeptidase/ cysteine-type peptidase go_component endomembrane system|GO:0012505||IEA go_process proteolysis|GO:0006508||IEA go_process proteolysis|GO:0006508||ISS go_function cysteine-type endopeptidase activity|GO:0004197||IEA go_function cysteine-type peptidase activity|GO:0008234||IEA go_function cysteine-type peptidase activity|GO:0008234||ISS note cathepsin B-like cysteine protease, putative, similar to cathepsin B-like cysteine proteinase GI:609175 from (Nicotiana rustica) protein_id AT1G02300.1p transcript_id AT1G02300.1 protein_id AT1G02300.1p transcript_id AT1G02300.1
At1g02305	chr1:000455816	0	W/455816-455902,456178-456231,456314-456394,456490-456646,456757-456761,456843-456917,457010-457135,457211-457429,457514-457627,457716-457751,457840-457974	product cysteine-type endopeptidase/ cysteine-type peptidase go_component endomembrane system|GO:0012505||IEA go_process proteolysis|GO:0006508||IEA go_process proteolysis|GO:0006508||ISS go_function cysteine-type endopeptidase activity|GO:0004197||IEA go_function cysteine-type peptidase activity|GO:0008234||IEA go_function cysteine-type peptidase activity|GO:0008234||ISS note cathepsin B-like cysteine protease, putative, similar to cathepsin B-like cysteine proteinase (Nicotiana rustica) GI:609175; contains Pfam profile PF00112: Papain family cysteine protease protein_id AT1G02305.1p transcript_id AT1G02305.1 protein_id AT1G02305.1p transcript_id AT1G02305.1
At1g02310	chr1:000458243	0	C/458243-458636,458732-458940,459021-459143,459503-459682,460323-460652	gene_syn T6A9.1, T6A9_1  product hydrolase, hydrolyzing O-glycosyl compounds go_component endomembrane system|GO:0012505||IEA go_function hydrolase activity, hydrolyzing O-glycosyl compounds|GO:0004553||ISS note glycosyl hydrolase family protein 5 / cellulase family protein / (1-4)-beta-mannan endohydrolase, putative, similar to (1-4)-beta-mannan endohydrolase precursor GI:9836826 from (Lycopersicon esculentum) protein_id AT1G02310.1p transcript_id AT1G02310.1 protein_id AT1G02310.1p transcript_id AT1G02310.1
At1g02320	chr1:000461828	0	W/461828-461974	gene_syn T6A9.30  product unknown protein go_component cellular component unknown|GO:0008372||ND go_process biological process unknown|GO:0000004||ND go_function molecular function unknown|GO:0005554||ND note expressed protein protein_id AT1G02320.1p transcript_id AT1G02320.1 protein_id AT1G02320.1p transcript_id AT1G02320.1
At1g02330	chr1:000462202	0	C/462202-462383,462475-462632,462727-462800,462876-462999,463123-463323,463421-463521	gene_syn T6A9.2, T6A9_2  product unknown protein go_component cellular component unknown|GO:0008372||ND go_process biological process unknown|GO:0000004||ND go_function molecular function unknown|GO:0005554||ND note expressed protein, contains similarity to hepatocellular carcinoma-associated antigen 59 GI:7158847 from (Homo sapiens) protein_id AT1G02330.1p transcript_id AT1G02330.1 protein_id AT1G02330.1p transcript_id AT1G02330.1
At1g02335	chr1:000463855	0	C/463855-464523,464762-464924	pseudo  gene_syn T6A9.3 pseudo  product unknown protein note pseudogene, putative oxalate oxidase, blastp match of 63% identity and 3.9e-56 P-value to GP|11320856|dbj|BAB18339.1||AP002865 putative germin protein {Oryza sativa (japonica cultivar-group)} protein_id AT1G02335.1p transcript_id AT1G02335.1 protein_id AT1G02335.1p transcript_id AT1G02335.1 
At1g02340	chr1:000465933	0	C/465933-466247,466732-466797,466958-467086,467186-467552,467684-467685	gene_syn FBI1, LONG HYPOCOTYL IN FAR-RED, REDUCED PHYTOCHROME SIGNALING 1, REDUCED SENSITIVITY TO FAR-RED LIGHT 1, RSF1, T6A9.4, T6A9_4 gene HFR1 function Encodes a light-inducible, nuclear bHLH protein involved in phytochrome signaling. Mutants exhibit a long-hypocotyl phenotype only under far-red light but not under red light and are defective in other phytochrome A-related responses. Mutants also show blue light response defects. HFR1 interacts with COP1, co-localizes to the nuclear specks and is ubiquinated by COP1.  product HFR1 (LONG HYPOCOTYL IN FAR-RED); DNA binding / transcription factor go_process signal transduction|GO:0007165|10995393|TAS go_function DNA binding|GO:0003677||ISS go_function transcription factor activity|GO:0003700|11118137|ISS go_function transcription factor activity|GO:0003700|12679534|ISS go_component nucleus|GO:0005634|10995393|TAS go_component nucleus|GO:0005634|15705947|IDA go_process protein polyubiquitination|GO:0000209|15705947|IDA go_process red, far-red light phototransduction|GO:0009585|12061902|TAS go_process response to light intensity|GO:0009642|15705947|IEP go_process blue light signaling pathway|GO:0009785|15705947|TAS go_function protein binding|GO:0005515|15705947|IPI go_function protein binding|GO:0005515|15960622|IPI note long hypocotyl in far-red 1 (HFR1) / reduced phytochrome signaling (REP1) / basic helix-loop-helix FBI1 protein (FBI1) / reduced sensitivity to far-red light (RSF1) / bHLH protein 26 (BHLH026) (BHLH26), identical to SP|Q9FE22 Long hypocotyl in far-red 1 (bHLH-like protein HFR1) (Reduced phytochrome signaling) (Basic helix-loop-helix FBI1 protein) (Reduced sensitivity to far-red light) (Arabidopsis thaliana) protein_id AT1G02340.1p transcript_id AT1G02340.1 protein_id AT1G02340.1p transcript_id AT1G02340.1
At1g02350	chr1:000469818	0	W/469818-469971,470252-470288,470371-470482,470574-470693	gene_syn T6A9.34  product unknown protein go_component endomembrane system|GO:0012505||IEA go_process siroheme biosynthesis|GO:0019354||IEA go_function molecular function unknown|GO:0005554||ND note protoporphyrinogen oxidase-related, contains very low similarity to protoporphyrinogen oxidase (SP|P55826) protein_id AT1G02350.1p transcript_id AT1G02350.1 protein_id AT1G02350.1p transcript_id AT1G02350.1
At1g02360	chr1:000472138	0	C/472138-472507,472668-473116	gene_syn T6A9.5, T6A9_5  product chitinase go_component endomembrane system|GO:0012505||IEA go_process response to pest, pathogen or parasite|GO:0009613||IEA go_process cell wall catabolism|GO:0016998||IEA go_function chitinase activity|GO:0004568||IEA go_function chitinase activity|GO:0004568||ISS note chitinase, putative, similar to chitinase precursor GI:5880845 from (Petroselinum crispum) protein_id AT1G02360.1p transcript_id AT1G02360.1 protein_id AT1G02360.1p transcript_id AT1G02360.1
At1g02370	chr1:000474516	0	W/474516-474887,475142-476383	gene_syn T6A9.6, T6A9_6  product unknown protein go_component mitochondrion|GO:0005739||IEA go_function molecular function unknown|GO:0005554||ND note pentatricopeptide (PPR) repeat-containing protein, low similarity to DNA-binding protein (Triticum aestivum) GI:6958202; contains Pfam profile PF01535: PPR repeat protein_id AT1G02370.1p transcript_id AT1G02370.1 protein_id AT1G02370.1p transcript_id AT1G02370.1
At1g02380	chr1:000477814	0	W/477814-478443	gene_syn T6A9.7, T6A9_7  product unknown protein go_component cellular component unknown|GO:0008372||ND go_process biological process unknown|GO:0000004||ND go_function molecular function unknown|GO:0005554||ND note expressed protein protein_id AT1G02380.1p transcript_id AT1G02380.1 protein_id AT1G02380.1p transcript_id AT1G02380.1
At1g02390	chr1:000480921	0	W/480921-481619,482270-483163	gene_syn ATGPAT2, GPAT2, T6A9.8, T6A9_8 gene ATGPAT2/GPAT2 function Encodes a member of a family of proteins with glycerol-3-phosphate acyltransferase activity.  product ATGPAT2/GPAT2; acyltransferase go_component mitochondrion|GO:0005739||IEA go_process metabolism|GO:0008152||IEA go_process metabolism|GO:0008152||ISS go_function acyltransferase activity|GO:0008415||IEA go_function acyltransferase activity|GO:0008415||ISS note phospholipid/glycerol acyltransferase family protein, contains Pfam profile PF01553: Acyltransferase protein_id AT1G02390.1p transcript_id AT1G02390.1 protein_id AT1G02390.1p transcript_id AT1G02390.1
At1g02400	chr1:000486964	0	W/486964-487364,488720-489062,489146-489391	gene_syn T6A9.9, T6A9_9  product gibberellin 2-beta-dioxygenase go_process gibberellic acid catabolism|GO:0045487|10200325|IDA go_function gibberellin 2-beta-dioxygenase activity|GO:0045543|10200325|IDA note gibberellin 2-oxidase, putative / GA2-oxidase, putative, similar to GA2ox2 (GI:4678368); similar to dioxygenase GI:1666096 from (Marah macrocarpus); contains PF03171 2OG-Fe(II) oxygenase superfamily domain protein_id AT1G02400.1p transcript_id AT1G02400.1 protein_id AT1G02400.1p transcript_id AT1G02400.1
At1g02405	chr1:000490093	0	C/490093-490497	product unknown protein go_component anchored to membrane|GO:0031225|12068095|TAS go_component anchored to membrane|GO:0031225|12805588|TAS go_process biological process unknown|GO:0000004||ND go_function molecular function unknown|GO:0005554||ND note proline-rich family protein, contains proline-rich region, INTERPRO:IPR000694 protein_id AT1G02405.1p transcript_id AT1G02405.1 protein_id AT1G02405.1p transcript_id AT1G02405.1
At1g02410	chr1:000491300	0	W/491300-491379,491488-491803,491907-491959,492086-492158,492248-492352,492443-492523,492607-492762	gene_syn T6A9.10, T6A9_10  product copper ion binding go_component mitochondrion|GO:0005739||IEA go_process biological process unknown|GO:0000004||ND go_function copper ion binding|GO:0005507||IEA note cytochrome c oxidase assembly protein CtaG / Cox11 family, similar to cytochrome c oxidase assembly protein cox11 GI:1244782 from (Saccharomyces cerevisiae); similar to Cytochrome c oxidase assembly protein COX11, mitochondrial precursor (SP:Q9Y6N1){Homo sapiens}; contains Pfam PF04442: Cytochrome c oxidase assembly protein CtaG / Cox11 protein_id AT1G02410.1p transcript_id AT1G02410.1 protein_id AT1G02410.1p transcript_id AT1G02410.1
At1g02420	chr1:000493683	0	W/493683-495158	gene_syn T6A9.11, T6A9_11  product unknown protein go_component endomembrane system|GO:0012505||IEA go_process biological process unknown|GO:0000004||ND go_function molecular function unknown|GO:0005554||ND note pentatricopeptide (PPR) repeat-containing protein, low similarity to fertility restorer (Petunia x hybrida) GI:22128587; contains Pfam profile: PF01535 PPR repeat protein_id AT1G02420.1p transcript_id AT1G02420.1 protein_id AT1G02420.1p transcript_id AT1G02420.1
At1g02430	chr1:000495175	0	C/495175-495259,495350-495489,495563-495682,495757-495833,495912-495963	gene_syn ATARFD1B, T6A9.12, T6A9_12 gene ATARFD1B function Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. Members of this family are known to be essential for vesicle coating and uncoating and functions in GTP-binding.  product ATARFD1B; GTP binding go_component cellular component unknown|GO:0008372||ND go_process N-terminal protein myristoylation|GO:0006499|12912986|IDA go_function GTP binding|GO:0005525|12644670|ISS note ADP-ribosylation factor, putative, similar to ADP-ribosylation factor GI:166586 from (Arabidopsis thaliana) protein_id AT1G02430.1p transcript_id AT1G02430.1 protein_id AT1G02430.1p transcript_id AT1G02430.1
At1g02440	chr1:000496586	0	C/496586-496670,496760-496899,496972-497091,497165-497241,497329-497479	gene_syn ATARFD1A, T6A9.25 gene ATARFD1A function Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. Members of this family are known to be essential for vesicle coating and uncoating and functions in GTP-binding.  product ATARFD1A; GTP binding go_component cellular component unknown|GO:0008372||ND go_process N-terminal protein myristoylation|GO:0006499|12912986|IDA go_function GTP binding|GO:0005525|12644670|ISS note ADP-ribosylation factor, putative, similar to ADP-ribosylation factor GB:AAA32729 GI:166586 from (Arabidopsis thaliana) protein_id AT1G02440.1p transcript_id AT1G02440.1 protein_id AT1G02440.1p transcript_id AT1G02440.1
At1g02450	chr1:000498052	0	C/498052-498480	gene_syn T6A9.23  product unknown protein go_component cellular component unknown|GO:0008372||ND go_process biological process unknown|GO:0000004||ND go_function molecular function unknown|GO:0005554||ND note NPR1/NIM1-interacting protein 1 (NIMIN-1), identical to NIMIN-1 protein (Arabidopsis thaliana) gi|12057154|emb|CAC19844; identical to cDNA NIMIN-1 protein (nimin-1 gene)GI:12057153 protein_id AT1G02450.1p transcript_id AT1G02450.1 protein_id AT1G02450.1p transcript_id AT1G02450.1
At1g02460	chr1:000504897	0	C/504897-505407,505499-505583,505845-506052,506137-506184,506367-506534,506644-507099	gene_syn T6A9.22  product polygalacturonase go_component mitochondrion|GO:0005739||IEA go_process carbohydrate metabolism|GO:0005975||IEA go_process carbohydrate metabolism|GO:0005975||ISS go_function polygalacturonase activity|GO:0004650||IEA go_function polygalacturonase activity|GO:0004650||ISS note glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein, similar to polygalacturonase PG1 GI:5669846, PG2 GI:5669848 from (Glycine max); contains PF00295: Glycosyl hydrolases family 28 (polygalacturonases) protein_id AT1G02460.1p transcript_id AT1G02460.1 protein_id AT1G02460.1p transcript_id AT1G02460.1
At1g02470	chr1:000511916	0	C/511916-511990,512074-512121,512214-512262,512378-512430,512525-512620,513147-513246,513332-513573	gene_syn T6A9.26  product unknown protein go_component chloroplast|GO:0009507||IEA go_process biological process unknown|GO:0000004||ND go_function molecular function unknown|GO:0005554||ND note expressed protein, contains non-consensus splice sites; protein_id AT1G02470.1p transcript_id AT1G02470.1 protein_id AT1G02470.1p transcript_id AT1G02470.1
At1g02475	chr1:000514110	0	C/514110-514184,514271-514318,514422-514470,514553-514605,514705-514800,514892-514991,515093-515331	product unknown protein go_component chloroplast|GO:0009507||IEA go_process biological process unknown|GO:0000004||ND go_function molecular function unknown|GO:0005554||ND note expressed protein protein_id AT1G02475.1p transcript_id AT1G02475.1 protein_id AT1G02475.1p transcript_id AT1G02475.1
At1g02480	chr1:000515494	0	W/515494-515566	gene_syn 51953.TRNA-PHE-1 product pre-tRNA go_process translational elongation|GO:0006414|8980477|TAS go_function triplet codon-amino acid adaptor activity|GO:0030533|8980477|TAS note tRNA-Phe (anticodon: GAA) 
At1g02490	chr1:000516618	0	W/516618-516734	gene_syn T14P4.35, T14P4_35  product unknown protein go_component cellular component unknown|GO:0008372||ND go_process biological process unknown|GO:0000004||ND go_function molecular function unknown|GO:0005554||ND note hypothetical protein protein_id AT1G02490.1p transcript_id AT1G02490.1 protein_id AT1G02490.1p transcript_id AT1G02490.1
At1g02500	chr1:000519037	0	W/519037-520218	gene_syn SAM-1 gene SAM1 function S-adenosylmethionine synthetase gene sam-1  product SAM1; methionine adenosyltransferase go_process S-adenosylmethionine biosynthesis|GO:0006556||ISS go_function methionine adenosyltransferase activity|GO:0004478||ISS go_component cellular component unknown|GO:0008372||ND go_process ethylene biosynthesis|GO:0009693|2535470|TAS go_function S-adenosylmethionine-dependent methyltransferase activity|GO:0008757|2535470|ISS note S-adenosylmethionine synthetase 1 (SAM1), identical to S-adenosylmethionine synthetase 1 (Methionine adenosyltransferase 1, AdoMet synthetase 1) (Arabidopsis thaliana) SWISS-PROT:P23686 protein_id AT1G02500.1p transcript_id AT1G02500.1 protein_id AT1G02500.1p transcript_id AT1G02500.1
At1g02510	chr1:000520687	0	C/520687-520804,520890-521626	gene_syn T14P4.16, T14P4_16 gene KCO4 function member of KCO5 protein family  product KCO4; outward rectifier potassium channel go_component membrane|GO:0016020||IEA go_process potassium ion transport|GO:0006813||IEA go_function outward rectifier potassium channel activity|GO:0015271||ISS go_function outward rectifier potassium channel activity|GO:0015271||ISS note outward rectifying potassium channel, putative (KCO4), similar to kco1 (Arabidopsis thaliana) gi|2230761|emb|CAA69158; member of the 2 pore, 4 transmembrane (2P/4TM) K+ channel family, PMID:11500563 protein_id AT1G02510.1p transcript_id AT1G02510.1 protein_id AT1G02510.1p transcript_id AT1G02510.1
At1g02520	chr1:000524134	0	W/524134-524436,524521-524575,524662-524837,524917-525138,525224-525462,525546-527202,527311-527577,527658-527921,528010-528309,528392-528745	gene_syn T14P4.15, T14P4_15  product ATPase, coupled to transmembrane movement of substances go_component integral to membrane|GO:0016021||IEA go_process transport|GO:0006810||IEA go_function ATPase activity, coupled to transmembrane movement of substances|GO:0042626||ISS note multidrug resistance P-glycoprotein, putative, similar to multidrug-resistant protein CjMDR1 GI:14715462 from (Coptis japonica) protein_id AT1G02520.1p transcript_id AT1G02520.1 protein_id AT1G02520.1p transcript_id AT1G02520.1
At1g02530	chr1:000529836	0	W/529836-530099,530182-530236,530403-530578,530681-530902,530980-531218,531325-533005,533079-533345,533453-533716,533808-534107,534189-534542	gene_syn T14P4.14, T14P4_14  product ATPase, coupled to transmembrane movement of substances go_component integral to membrane|GO:0016021||IEA go_process transport|GO:0006810||IEA go_function ATPase activity, coupled to transmembrane movement of substances|GO:0042626||ISS note multidrug resistance P-glycoprotein, putative, similar to multidrug-resistant protein CjMDR1 GI:14715462 from (Coptis japonica) protein_id AT1G02530.1p transcript_id AT1G02530.1 protein_id AT1G02530.1p transcript_id AT1G02530.1
At1g02540	chr1:000534827	0	C/534827-535699	gene_syn T14P4.13, T14P4_13  product unknown protein go_component cellular component unknown|GO:0008372||ND go_process biological process unknown|GO:0000004||ND go_function molecular function unknown|GO:0005554||ND note expressed protein protein_id AT1G02540.1p transcript_id AT1G02540.1 protein_id AT1G02540.1p transcript_id AT1G02540.1
At1g02550	chr1:000536483	0	W/536483-537211	gene_syn T14P4.25, T14P4_25  product enzyme inhibitor/ pectinesterase/ pectinesterase inhibitor go_component endomembrane system|GO:0012505||IEA go_process biological process unknown|GO:0000004||ND go_function enzyme inhibitor activity|GO:0004857||IEA go_function pectinesterase activity|GO:0030599||IEA go_function pectinesterase inhibitor activity|GO:0046910||ISS note invertase/pectin methylesterase inhibitor family protein, low similarity to pectinesterase from Lycopersicon esculentum SP|Q43143, Arabidopsis thaliana SP|Q43867; contains Pfam profile PF04043: Plant invertase/pectin methylesterase inhibitor protein_id AT1G02550.1p transcript_id AT1G02550.1 protein_id AT1G02550.1p transcript_id AT1G02550.1
At1g02560	chr1:000538000	0	W/538000-538130,538209-538328,538419-538533,538627-538719,538808-538853,538936-539008,539255-539289,539391-539479,539611-539805	gene_syn CLP PROTEASE 1 PROTEOLYTIC SUBUNIT, NCLPP1, NCLPP5, NUCLEAR ENCODED CLP PROTEASE 1, T14P4.12, T14P4_12 gene CLPP5 function One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).  product CLPP5 (NUCLEAR ENCODED CLP PROTEASE 1); endopeptidase Clp go_component chloroplast stroma|GO:0009570|11278690|IDA go_process ATP-dependent proteolysis|GO:0006510|11278690|TAS go_process ATP-dependent proteolysis|GO:0006510|11299370|TAS go_function endopeptidase Clp activity|GO:0008462|11299370|ISS go_function endopeptidase Clp activity|GO:0008462||ISS go_component thylakoid (sensu Viridiplantae)|GO:0009534|11278690|IDA go_component chloroplastic endopeptidase Clp complex|GO:0009840|11278690|IDA note ATP-dependent Clp protease proteolytic subunit (ClpP1), identical to nClpP1 GB:BAA82065 GI:5360579 from (Arabidopsis thaliana); contains Pfam profile PF00574: Clp protease; contains TIGRfam profile TIGR00493: ATP-dependent Clp protease, proteolytic subunit ClpP protein_id AT1G02560.1p transcript_id AT1G02560.1 protein_id AT1G02560.1p transcript_id AT1G02560.1
At1g02570	chr1:000541380	0	W/541380-541792,541856-542093,543339-543983	gene_syn T14P4.23, T14P4_23  product unknown protein note expressed protein protein_id AT1G02570.1p transcript_id AT1G02570.1 protein_id AT1G02570.1p transcript_id AT1G02570.1
At1g02580	chr1:000544796	0	W/544796-544804,544973-545062,545632-545963,546062-546235,546313-546400,546512-546637,546727-546774,546871-546939,547024-547172,547248-547374,547463-547671,547748-547879,547970-548051,548134-548181,548311-548439,548525-548602,548815-548994	gene_syn EMB173, EMBRYO DEFECTIVE 173, FERTILIZATION INDEPENDENT SEED, FIS1, MEA, MEDEA, T14P4.11, T14P4_11 gene MEA function Encodes a putative transcription factor that negatively regulates seed development in the absence of fertilization. Mutations in this locus result in embryo lethality.  product MEA (MEDEA); transcription factor go_function transcription factor activity|GO:0003700|11118137|ISS go_component nucleus|GO:0005634|10962025|IDA go_process endosperm development|GO:0009960||NAS note maternal embryogenesis control protein / MEDEA (MEA), nearly identical to MEDEA GB:AAC39446 GI:3089625 from (Arabidopsis thaliana); contains Pfam profile PF00856: SET domain protein_id AT1G02580.1p transcript_id AT1G02580.1 protein_id AT1G02580.1p transcript_id AT1G02580.1
At1g02590	chr1:000552138	0	C/552138-552182,552275-552373,552456-552506,552687-552761	gene_syn T14P4.22, T14P4_22  product aldehyde oxidase go_component cellular component unknown|GO:0008372||ND go_process biological process unknown|GO:0000004||ND go_function aldehyde oxidase activity|GO:0004031||ISS note aldehyde oxidase, putative, similar to aldehyde oxidase GB:BAA28630 GI:3172044 from (Arabidopsis thaliana) protein_id AT1G02590.1p transcript_id AT1G02590.1 protein_id AT1G02590.1p transcript_id AT1G02590.1
At1g02600	chr1:000552640	0	W/552640-552711	gene_syn 51953.TRNA-HIS-1 product pre-tRNA go_process translational elongation|GO:0006414|8980477|TAS go_function triplet codon-amino acid adaptor activity|GO:0030533|8980477|TAS note tRNA-His (anticodon: GTG) 
At1g02610	chr1:000553181	0	C/553181-553261,553395-553475,553600-553677,555572-555643,555726-555854	gene_syn T14P4.10, T14P4_10  product protein binding / ubiquitin-protein ligase/ zinc ion binding go_component ubiquitin ligase complex|GO:0000151||IEA go_process protein ubiquitination|GO:0016567||IEA go_function ubiquitin-protein ligase activity|GO:0004842||IEA go_function protein binding|GO:0005515||ISS go_function zinc ion binding|GO:0008270||IEA go_function zinc ion binding|GO:0008270||ISS note zinc finger (C3HC4-type RING finger) family protein, contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger) protein_id AT1G02610.1p transcript_id AT1G02610.1 protein_id AT1G02610.1p transcript_id AT1G02610.1
At1g02620	chr1:000557092	0	W/557092-557108,557317-557668	gene_syn T14P4.21, T14P4_21  product GTP binding go_component endomembrane system|GO:0012505||IEA go_process intracellular protein transport|GO:0006886||IEA go_function GTP binding|GO:0005525||IEA note GTP-binding protein (SAR1A), identical to GTP-binding protein Sar1 (SP:O04834) (Arabidopsis thaliana); contains domain PF00025: ADP-ribosylation factor family protein_id AT1G02620.1p transcript_id AT1G02620.1 protein_id AT1G02620.1p transcript_id AT1G02620.1
At1g02630	chr1:000561007	0	C/561007-561320,561453-561695,561902-562382	gene_syn T14P4.9, T14P4_9  product unknown protein go_component membrane|GO:0016020||IEA go_process transport|GO:0006810||IEA note similar to equilibrative nucleoside transporter family protein [Arabidopsis thaliana] (TAIR:At1g70330.1); similar to putative equilibrative nucleoside transporter ENT8 splice variant [Oryza sativa (japonica cultivar-group)] (GB:XP_480602.1); contains InterPro domain Delayed-early response protein/equilibrative nucleoside transporter (InterPro:IPR002259) protein_id AT1G02630.2p transcript_id AT1G02630.2 protein_id AT1G02630.2p transcript_id AT1G02630.2
At1g02630	chr1:000561007	0	C/561007-561695,561902-562382	gene_syn T14P4.9, T14P4_9  product nucleoside transporter go_component membrane|GO:0016020||IEA go_process transport|GO:0006810||IEA go_function nucleoside transporter activity|GO:0005337||ISS note equilibrative nucleoside transporter, putative (ENT8), identical to putative equilibrative nucleoside transporter ENT8 (Arabidopsis thaliana) GI:28207664; contains similarity to SWISS-PROT:O54699 equilibrative nucleoside transporter 2 (Equilibrative nitrobenzylmercaptopurine riboside-insensitive nucleoside transporter, Equilibrative NBMPR-insensitive nucleoside transporter, Nucleoside transporter, ei-type) (Rattus norvegicus); contains Pfam profile PF01733: Nucleoside transporter protein_id AT1G02630.1p transcript_id AT1G02630.1 protein_id AT1G02630.1p transcript_id AT1G02630.1
At1g02640	chr1:000564293	0	W/564293-564697,565433-565711,565784-565953,566043-566140,566226-567580	gene_syn ATBXL2, BETA-XYLOSIDASE 2, T14P4.8, T14P4_8 gene BXL2 function encodes a protein similar to a beta-xylosidase located in the extracellular matrix. This is a member of glycosyl hydrolase family 3 and has six other closely related members.  product BXL2 (BETA-XYLOSIDASE 2); hydrolase, hydrolyzing O-glycosyl compounds go_component endomembrane system|GO:0012505||IEA go_process carbohydrate metabolism|GO:0005975||IEA go_function hydrolase activity, hydrolyzing O-glycosyl compounds|GO:0004553||IEA go_function hydrolase activity, hydrolyzing O-glycosyl compounds|GO:0004553||ISS note glycosyl hydrolase family 3 protein, similar to beta-xylosidase GB:Z84377 GI:2102655 from (Aspergillus niger) protein_id AT1G02640.1p transcript_id AT1G02640.1 protein_id AT1G02640.1p transcript_id AT1G02640.1
At1g02650	chr1:000568704	0	W/568704-568739,568832-569223,569305-570418	gene_syn T14P4.7, T14P4_7  product heat shock protein binding / unfolded protein binding go_component cellular component unknown|GO:0008372||ND go_process protein folding|GO:0006457||IEA go_process protein folding|GO:0006457||ISS go_function heat shock protein binding|GO:0031072||IEA go_function unfolded protein binding|GO:0051082||IEA note DNAJ heat shock N-terminal domain-containing protein, contains Pfam profile PF00226: DnaJ domain protein_id AT1G02650.1p transcript_id AT1G02650.1 protein_id AT1G02650.1p transcript_id AT1G02650.1
At1g02660	chr1:000572187	0	C/572187-572759,572836-573252,573338-573397,573489-573953,574120-574746	gene_syn T14P4.6, T14P4_6  product triacylglycerol lipase go_component cellular component unknown|GO:0008372||ND go_process lipid metabolism|GO:0006629||IEA go_process lipid metabolism|GO:0006629||ISS go_function triacylglycerol